Isolation and characterization of tick-borne Roseomonas haemaphysalidis sp. nov. and rodent-borne Roseomonas marmotae sp. nov.

Wentao Zhu; Juan Zhou; Shan Lu; Jing Yang; Xin-He Lai; Dong Jin; Ji Pu; Yuyuan Huang; Liyun Liu; Zhenjun Li; Jianguo Xu

doi:10.1007/s12275-022-1428-1

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Isolation and characterization of tick-borne Roseomonas haemaphysalidis sp. nov. and rodent-borne Roseomonas marmotae sp. nov.: Wentao Zhu ¹, Juan Zhou ¹, Shan Lu ^1,2,3, Jing Yang ^1,2,3, Xin-He Lai ⁴, Dong Jin ^1,2,3, Ji Pu ¹, Yuyuan Huang ¹, Liyun Liu ¹, Zhenjun Li ¹, Jianguo Xu ^1,3,5; Journal of Microbiology 2022;60(2):137-146.
DOI: https://doi.org/10.1007/s12275-022-1428-1
Published online: November 26, 2021

¹State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Changping, Beijing 102206, P. R. China, ²Shanghai Public Health Clinical Center, Fudan University, Shanghai 201508, P. R. China, ³Research Units of Discovery of Unknown Bacteria and Function, Chinese Academy of Medical Sciences, Beijing 100730, P. R. China, ⁴Henan Key Laboratory of Biomolecular Recognition and Sensing, College of Chemistry and Chemical Engineering, Henan Joint International Research Laboratory of Chemo/Biosensing and Early Diagnosis of Major Diseases, Shangqiu Normal University, Shangqiu 476000, P. R. China, ⁵2Shanghai Public Health Clinical Center, Fudan University, Shanghai 201508, P. R. China

Received: 10 August 2021 • Revised: 26 October 2021 • Accepted: 27 October 2021

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Abstract

Four novel Gram-negative, mesophilic, aerobic, motile, and cocci-shaped strains were isolated from tick samples (strains 546T and 573) and respiratory tracts of marmots (strains 1318T and 1311). The 16S rRNA gene sequencing revealed that strains 546T and 573 were 97.8% identical to Roseomonas wenyumeiae Z23T, whereas strains 1311 and 1318T were 98.3% identical to Roseomonas ludipueritiae DSM 14915T. In addition, a 98.0% identity was observed between strains 546T and 1318T. Phylogenetic and phylogenomic analyses revealed that strains 546T and 573 clustered with R. wenyumeiae Z23T, whereas strains 1311 and 1318T grouped with R. ludipueritiae DSM 14915T. The average nucleotide identity between our isolates and members of the genus Roseomonas was below 95%. The genomic G+C content of strains 546T and 1318T was 70.9% and 69.3%, respectively. Diphosphatidylglycerol (DPG) and phosphatidylethanolamine (PE) were the major polar lipids, with Q-10 as the predominant respiratory quinone. According to all genotypic, phenotypic, phylogenetic, and phylogenomic analyses, the four strains represent two novel species of the genus Roseomonas, for which the names Roseomonas haemaphysalidis sp. nov. and Roseomonas marmotae sp. nov. are proposed, with 546T (= GDMCC 1.1780T = JCM 34187T) and 1318T (= GDMCC 1.1781T = JCM 34188T) as type strains, respectively.

Keywords: Roseomonas haemaphysalidis, Roseomonas marmotae, tick, marmot, Qinghai-Tibet plateau

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Isolation and characterization of tick-borne Roseomonas haemaphysalidis sp. nov. and rodent-borne Roseomonas marmotae sp. nov.

J. Microbiol. 2022;60(2):137-146. Published online November 26, 2021

DOI: https://doi.org/10.1007/s12275-022-1428-1

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