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Editor's Choice 2025

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Editor’s Choice articles are curated by our senior editors, who represent each section, to highlight research published in 2025 that they consider particularly interesting to our readers and/or important within the respective research area.

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Microbial Physiology and Biochemistry
Article
Cryo-EM structure of the glycosylated protein CgeA in the crust of Bacillus subtilis endospores
Migak Park, Doyeon Kim, Yeongjin Baek, Eunbyul Jo, Jaekyung Hyun, Nam-Chul Ha
J. Microbiol. 2025;63(10):e2504013.   Published online October 31, 2025
DOI: https://doi.org/10.71150/jm.2504013
  • 2,580 View
  • 74 Download
AbstractAbstract PDFSupplementary Material

The Bacillus subtilis spore crust is an exceptionally robust proteinaceous layer that protects spores under extreme environmental conditions. Among its key components, CgeA, a glycosylation-associated protein, plays a critical role in modifying crust properties through its glycosylated moiety, enhancing spore dispersal in aqueous environments. In this study, we present the high-resolution cryo-electron microscopy structure of the core region of CgeA at 3.05 Å resolution, revealing a doughnut-like hexameric assembly. The N-terminal regions are disordered, whereas the C-terminal region forms the core of the hexamer. Although the loop containing Thr112 was not resolved in the density map, its location can be inferred from surrounding residues, suggesting that Thr112 is situated on the exposed surface of the hexamer. On the opposite face, a distinct electrostatic pattern is observed, featuring a negatively charged central pore and a positively charged outer surface. Modeling and biochemical studies with the putative glycosyltransferase CgeB provide insights into how the glycosyl group is transferred to Thr112. This study offers a molecular-level understanding of the assembly, glycosylation, and environmental adaptability of the B. subtilis spore crust, with valuable implications for controlling spore formation in industrial applications.

Article
Crystal structures of the μ2 subunit of clathrin-adaptor protein 2 in complex with peptides derived from human papillomavirus 16 E7
Sujin Jung, Dahwan Lim, Joon Sig Choi, Ho-Chul Shin, Seung Jun Kim, Bonsu Ku
J. Microbiol. 2025;63(8):e2505003.   Published online August 31, 2025
DOI: https://doi.org/10.71150/jm.2505003
  • 2,262 View
  • 66 Download
  • 2 Web of Science
  • 2 Crossref
AbstractAbstract PDF

Human papillomaviruses (HPVs) cause abnormal cellular proliferation, leading to malignant or benign lesions, such as cervical cancer and warts. The genome of HPV16, the most prevalent high-risk oncogenic genotype within the Alphapapillomavirus genus, encodes two oncoproteins. One of these proteins, E7, interacts with multiple host proteins and modulates their functions through distinct pathways. The CR2 domain of HPV16 E7 was recently reported to interact with the μ2 subunit of clathrin-adaptor protein 2 (AP2-μ2), an adaptor complex involved in cargo internalization during clathrin-mediated endocytosis. In this study, to provide molecular insights into their intermolecular interactions, we determined the crystal structures of AP2-μ2 in complex with the HPV16 E7-derived peptides. Subsequent biochemical analyses revealed that this interaction is primarily maintained by the Y-x-x-Φ motif and further supported by acidic cluster residues of HPV16 E7. Finally, sequence alignment of the E7 CR2 domains from various HPV genotypes showed that the AP2-μ2-binding motif is largely conserved in Alpha-, Beta-, and Mupapillomaviruses, but not in Nu- and Gammapapillomaviruses.

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  • Molecular analysis of the interaction between ubiquitin-specific protease 7 and large T antigen of Merkel cell polyomavirus
    Dahwan Lim, Jung-Hwan Park, Ho-Chul Shin, Seung Jun Kim, Bonsu Ku
    Journal of Microbiology.2026; 64(2): e2511009.     CrossRef
  • Crystal structure of Bcl-2 from lymphocystis disease virus 2 in complex with the BH3 domain of zebrafish BaxA
    Dahwan Lim, So Hyeon Park, Joon Sig Choi, Ho-Chul Shin, Seung Jun Kim, Bonsu Ku
    Journal of Microbiology.2026; 64(5): e2512006.     CrossRef
Article
Inhibition of cardiolipin biosynthesis partially suppresses the sensitivity of an Escherichia coli mutant lacking OmpC to envelope stress
Dae-Beom Ryu, Umji Choi, Gyubin Han, Chang-Ro Lee
J. Microbiol. 2025;63(11):e2507004.   Published online November 30, 2025
DOI: https://doi.org/10.71150/jm.2507004
  • 2,183 View
  • 44 Download
AbstractAbstract PDFSupplementary Material

Porins in the outer membrane (OM) of Gram-negative bacteria play two main functions: passage of various extracellular molecules and maintenance of membrane integrity. OmpC, a non-specific porin, is involved in both functions; however, the exact mechanism of maintenance of membrane integrity remains unknown. In this study, we found that inhibiting cardiolipin biosynthesis partially restored the growth defect of the ompC mutant under envelope stress. Among the three enzymes involved in cardiolipin biosynthesis, ClsABC, this effect is primarily associated with ClsA. Notably, the deletion of ClsA also suppressed the similar phenotypes of an Escherichia coli mutant lacking YhdP, a transmembrane protein involved in phospholipid transport from the inner membrane to the OM. Collectively, these results imply that OmpC may contribute to membrane integrity, partially through mechanisms linked to transport or biosynthesis of phospholipids such as cardiolipin.


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