Distribution characteristics of fungal communities with depth in paddy fields of three soil types in China

Xu Li; Huanhuan Wang; Xiang Li; Xinyu Li; Huiwen Zhang

doi:10.1007/s12275-020-9409-8

Articles

Page Path: HOME > J. Microbiol > Volume 58(4); 2020 > Article

Journal Article
Distribution characteristics of fungal communities with depth in paddy fields of three soil types in China: Xu Li ¹, Huanhuan Wang ^1,2, Xiang Li ^1,2, Xinyu Li ¹, Huiwen Zhang ¹; Journal of Microbiology 2020;58(4):279-287.
DOI: https://doi.org/10.1007/s12275-020-9409-8
Published online: February 27, 2020

¹Key Laboratory of Pollution Ecology and Environmental Engineering, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang 110164, P. R. China, ²Graduate University of Chinese Academy of Sciences, Beijing 100049, P. R. China¹Key Laboratory of Pollution Ecology and Environmental Engineering, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang 110164, P. R. China, ²Graduate University of Chinese Academy of Sciences, Beijing 100049, P. R. China

Corresponding author: Huiwen Zhang , Tel: +86-24-8397-0380,

Received: 23 August 2019 • Revised: 17 December 2019 • Accepted: 13 January 2020

prev next

57 Views
0 Download
14 Web of Science
9 Crossref
12 Scopus

Full Article

Abstract

Little is known about the distribution of fungal communities with soil depth on relatively large scales. In this study, typical paddy soils in three regions (Hailun, Changshu, and Yingtan) from north to south China were selected to investigate the vertical distribution (0-100 cm) of the fungal community by Illumina MiSeq sequencing, and to identify the main factors influencing the fungal community distribution. The results indicated that the structure of the soil fungal community changed significantly with region and soil depth. Soil fungal taxa such as Zygomycota, Glomeromycota, Saccharomycete, Kazachstania, Mortierella, Massariosphaeria, Hypholoma, and Zopfiella were enriched at depths of 0–20 cm, whereas Dothideomycetes, Microbotryomycetes, Tremellomycetes, Sporobolomyces, Cryptococcus, Rhodotorula, Fusarium, and Pyrenochaetopsis had high relative abundances at 80–100 cm. Variance partitioning analysis indicated that the geographic distance contributed more to the fungal community variation than environmental variables on a large scale. In addition, soil total carbon and nitrogen contents were the main environmental factors driving the vertical distribution of the fungal community in paddy soils.

Keywords: fungal community;geographic distance;MiSeq sequencing;soil profile

Figure & Data

References

Citations

Citations to this article as recorded by

Region and Crop Type Influenced Fungal Diversity and Community Structure in Agricultural Areas in Qinghai Province
Lianyu Zhou, Xuelan Ma, Longrui Wang, Wenjuan Sun, Yu Liu, Yun Ma, Huichun Xie, Feng Qiao
Agriculture.2023; 14(1): 6. CrossRef
Comparing Sediment Microbial Communities of Arctic Beaver Ponds to Tundra Lakes and Streams
Kelly C. Shannon, Natasha R. Christman, Byron C. Crump, Michael P. Carey, Joshua Koch, Laura L. Lapham, Jonathan O’Donnell, Brett A. Poulin, Ken D. Tape, Jason A. Clark, Frederick S. Colwell
Journal of Geophysical Research: Biogeosciences.2023;[Epub] CrossRef
Soil depth as a driver of microbial and carbon dynamics in a planted forest (Pinus radiata) pumice soil
Alexa K. Byers, Loretta G. Garrett, Charlotte Armstrong, Fiona Dean, Steve A. Wakelin
SOIL.2023; 9(1): 55. CrossRef
Microbial communities in the diagnostic horizons of agricultural Isohumosols in northeast China reflect their soil classification
Zhuxiu Liu, Haidong Gu, Qin Yao, Feng Jiao, Junjie Liu, Jian Jin, Xiaobing Liu, Guanghua Wang
CATENA.2022; 216: 106430. CrossRef
Effects of continuous and rotational cropping practices on soil fungal communities in pineapple cultivation
Jing Chen, Hui Zeng
PeerJ.2022; 10: e13937. CrossRef
Soil texture is a stronger driver of the maize rhizosphere microbiome and extracellular enzyme activities than soil depth or the presence of root hairs
Bunlong Yim, Zeeshan Ibrahim, Lioba Rüger, Minh Ganther, Lorrie Maccario, Søren J. Sørensen, Anna Heintz-Buschart, Mika T. Tarkka, Doris Vetterlein, Michael Bonkowski, Evgenia Blagodatskaya, Kornelia Smalla
Plant and Soil.2022; 478(1-2): 229. CrossRef
The Effects of Drainage on the Soil Fungal Community in Freshwater Wetlands
Qingqing Zhao, Junhong Bai, Jia Jia, Guangliang Zhang, Jianing Wang, Yongchao Gao
Frontiers in Ecology and Evolution.2022;[Epub] CrossRef
Diversity and structure of soil fungal communities unveil the building history of a burial mound of ancient Japan (Tobiotsuka Kofun, Okayama Prefecture)
Samuele Voyron, Chiara Tonon, Laura Guglielmone, Luisella Celi, Cesare Comina, Hajime Ikeda, Naoko Matsumoto, Daniele Petrella, Joseph Ryan, Kazuhiro Sato, Akira Seike, Ivan Varriale, Jun Yamashita, Sergio E. Favero-Longo, Eleonora Bonifacio
Journal of Archaeological Science.2022; 146: 105656. CrossRef
Straw retention efficiently improves fungal communities and functions in the fallow ecosystem
Caifang Zhang, Zhaoli Lin, Youxiong Que, Nyumah Fallah, Muhammad Tayyab, Shiyan Li, Jun Luo, Zichu Zhang, Ahmad Yusuf Abubakar, Hua Zhang
BMC Microbiology.2021;[Epub] CrossRef

Cite this Article

Cite this Article: export Copy Download Format; Close

Download Citation

Download a citation file in RIS format that can be imported by all major citation management software, including EndNote, ProCite, RefWorks, and Reference Manager.

Format:

RIS — For EndNote, ProCite, RefWorks, and most other reference management software
BibTeX — For JabRef, BibDesk, and other BibTeX-specific software

Include:

Citation for the content below
Citation and abstract for the content below

Distribution characteristics of fungal communities with depth in paddy fields of three soil types in China

J. Microbiol. 2020;58(4):279-287. Published online February 27, 2020

DOI: https://doi.org/10.1007/s12275-020-9409-8

Related articles