Sulfitobacter profundi sp. nov., isolated from deep seawater

Jaeho Song; Hye-Jin Jang; Yochan Joung; Ilnam Kang; Jang-Cheon Cho

doi:10.1007/s12275-019-9150-3

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Sulfitobacter profundi sp. nov., isolated from deep seawater: Jaeho Song , Hye-Jin Jang , Yochan Joung , Ilnam Kang , Jang-Cheon Cho; Journal of Microbiology 2019;57(8):661-667.
DOI: https://doi.org/10.1007/s12275-019-9150-3
Published online: April 22, 2019

Department of Biological Sciences, Inha University, Incheon 22212, Republic of KoreaDepartment of Biological Sciences, Inha University, Incheon 22212, Republic of Korea

Corresponding author: Jang-Cheon Cho , Tel: +82-32-860-7711,

Received: 21 March 2019 • Accepted: 25 March 2019

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Abstract

A Gram-stain-negative, rod-shaped, obligately aerobic, chemoheterotrophic bacterium which is motile by means of a single polar flagellum, designated SAORIC-263T, was isolated from deep seawater of the Pacific Ocean. Phylogenetic analyses based on 16S rRNA gene sequences and genomebased phylogeny revealed that strain SAORIC-263T belonged to the genus Sulfitobacter and shared 96.1–99.9% 16S rRNA gene sequence similarities with Sulfitobacter species. Wholegenome sequencing of strain SAORIC-263T revealed a genome size of 3.9􍾘Mbp and DNA G+C content of 61.3 mol%. The SAORIC-263T genome shared an average nucleotide identity and digital DNA-DNA hybridization of 79.1–88.5% and 18.9–35.0%, respectively, with other Sulfitobacter genomes. The SAORIC-263T genome contained the genes related to benzoate degradation, which are frequently found in deep-sea metagenome. The strain contained summed feature 8 (C18:1 ω7c), C18:1 ω7c 11-methyl, and C16:0 as the predominant cellular fatty acids as well as ubiquinone-10 (Q-10) as the major respiratory quinone. The major polar lipids of the strain were phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, phosphatidylcholine, and aminolipid. On the basis of taxonomic data obtained in this study, it is suggested that strain SAORIC-263T represents a novel species of the genus Sulfitobacter, for which the name Sulfitobacter profundi sp. nov. is proposed. The type strain is SAORIC-263T (= KACC 21183T = NBRC 113428T).

Keywords: Sulfitobacter profundi;deep sea;genome;Sulfitobacter;Rhodobacteraceae

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Sulfitobacter profundi sp. nov., isolated from deep seawater

J. Microbiol. 2019;57(8):661-667. Published online April 22, 2019

DOI: https://doi.org/10.1007/s12275-019-9150-3

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