Paenibacillus marinisediminis sp. nov., a Bacterium Isolated from Marine Sediment

Hae-Won Lee; Seong Woon Roh; Kyung June Yim; Na-Ri Shin; Jina Lee; Tae Woong Whon; Joon Yong Kim; Dong-Wook Hyun; Daekyung Kim; Jin-Woo Bae

doi:10.1007/s12275-013-3198-2

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Paenibacillus marinisediminis sp. nov., a Bacterium Isolated from Marine Sediment: Hae-Won Lee ^1,2, Seong Woon Roh ¹, Kyung June Yim ², Na-Ri Shin ¹, Jina Lee ¹, Tae Woong Whon ¹, Joon Yong Kim ¹, Dong-Wook Hyun ¹, Daekyung Kim ², Jin-Woo Bae ¹; Journal of Microbiology 2013;51(3):312-317.
DOI: https://doi.org/10.1007/s12275-013-3198-2
Published online: June 28, 2013

¹Department of Life and Nanopharmaceutical Sciences and Department of Biology, Kyung Hee University, Seoul 130-701, Republic of Korea, ²Jeju Center, Korea Basic Science Institute, Jeju 690-756, Republic of Korea

Corresponding author: Jin-Woo Bae , Tel: +82-2-961-2312,

Received: 4 April 2013 • Accepted: 27 May 2013

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Abstract

A Gram-negative, nonmotile, endospore-forming, rod-shaped bacterial strain LHW35T, which belonged to the genus Paenibacillus, was isolated from marine sediment collected from the south coast of the Republic of Korea. A phylogenetic analysis of 16S rRNA gene sequences indicated that strain LHW35T was most closely related to Paenibacillus taiwanensis G-soil-2-3T (97.2% similarity). The optimal growth conditions for strain LHW35T were 37°C, pH 6.0, and 0% (w/v) NaCl. The main isoprenoid quinone was menaquinone-7 (MK-7) and the major polyamine was spermidine. The diamino acid present in the cell-wall peptidoglycan was meso-diaminopimelic acid. The major fatty acids were anteiso-C15:0 and C16:0. The polar lipids were phosphatidylethanolamine, phosphatidylglycerol, unidentified aminohospholipids, unidentified phospholipids, and unidentified polar lipids. A DNA-DNA hybridization experiment using the type strain of P. taiwanensis indicated <40% relatedness. The DNA G+C content was 45.0 mol%. Based on these phylogenetic, genomic, and phenotypic analyses, strain LHW35T should be classified as a novel species within the genus Paenibacillus, for which the name Paenibacillus marinisediminis sp. nov. is proposed. The type strain is LHW35T (=KACC 16317T =JCM 17886T).

Keywords: bacterial taxonomy;marine sediment;Paenibacillus marinisediminis sp. nov.

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Paenibacillus marinisediminis sp. nov., a Bacterium Isolated from Marine Sediment

J. Microbiol. 2013;51(3):312-317. Published online June 28, 2013

DOI: https://doi.org/10.1007/s12275-013-3198-2

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