NOTE] Phycicoccus ochangensis sp. nov., Isolated from Soil of a Potato Cultivation Field

Hyangmi Kim; Hyun-Woo Oh; Doo-Sang Park; Kang Hyun Lee; Sung Uk Kim; Hee-Moon Park; Kyung Sook Bae

doi:10.1007/s12275-012-1206-6

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NOTE] Phycicoccus ochangensis sp. nov., Isolated from Soil of a Potato Cultivation Field: Hyangmi Kim ^1,2, Hyun-Woo Oh ³, Doo-Sang Park ¹, Kang Hyun Lee ¹, Sung Uk Kim ³, Hee-Moon Park ², Kyung Sook Bae ¹; Journal of Microbiology 2012;50(2):349-353.
DOI: https://doi.org/10.1007/s12275-012-1206-6
Published online: April 27, 2012

¹Microbiological Resource Center, KRIBB, Daejeon 305-806, Republic of Korea, ²Department of Microbiology & Molecular Biology, Chungnam National University, Daejeon 305-764, Republic of Korea, ³Industrial Bio-materials Research Center, KRIBB, Daejeon 305-806, Republic of Korea

Corresponding author: Kyung Sook Bae , Tel: +82-42-860-4610,

Received: 21 April 2011 • Accepted: 5 December 2011

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Abstract

Two novel, Gram-positive, motile, coccal bacteria, strains L1b-b9T and B5a-b5, were isolated from a potato cultivation field in Ochang, Korea. These isolates grew at 10–45°C, pH 5.0–10.0, and in the presence of 8% (w/v) NaCl. The diagnostic diamino acid in the cell-wall peptidoglycan was mesodiaminopimelic acid. The major menaquinone was MK-8(H4) and the main cellular fatty acids were iso-C14:0, iso-C15:0, and anteiso-C15:0. Polar lipids in strain L1b-b9T consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, and an unknown glyco-amino lipid. The G+C content of genomic DNA was 73.6 mol%. A phylogenetic analysis based on 16S rRNA gene sequences showed that strains L1b-b9T and B5a-b5 shared 99.36% similarity and formed a robust clade with the type species of the genus Phycicoccus. Strain L1b-b9T is related most closely to Phycicoccus cremeus V2M29T (97.52% 16S rRNA gene sequence similarity). On the basis of phylogenetic characteristics, the name Phycicoccus ochangensis sp. nov. is proposed for strain LIb-b9T (=KCTC 19694T =JCM 17595T).

Keywords: Phycicoccus ochangensis;potato field;Intrasporangiaceae

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NOTE] Phycicoccus ochangensis sp. nov., Isolated from Soil of a Potato Cultivation Field

J. Microbiol. 2012;50(2):349-353. Published online April 27, 2012

DOI: https://doi.org/10.1007/s12275-012-1206-6

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