- Temperature Matters: Bacterial Response to Temperature Change
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Seongjoon Moon , Soojeong Ham , Juwon Jeong , Heechan Ku , Hyunhee Kim , Changhan Lee
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J. Microbiol. 2023;61(3):343-357. Published online April 3, 2023
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DOI: https://doi.org/10.1007/s12275-023-00031-x
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Temperature is one of the most important factors in all living organisms for survival. Being a unicellular organism, bacterium
requires sensitive sensing and defense mechanisms to tolerate changes in temperature. During a temperature shift,
the structure and composition of various cellular molecules including nucleic acids, proteins, and membranes are affected.
In addition, numerous genes are induced during heat or cold shocks to overcome the cellular stresses, which are known as
heat- and cold-shock proteins. In this review, we describe the cellular phenomena that occur with temperature change and
bacterial responses from a molecular perspective, mainly in Escherichia coli.
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Citations
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- [Minireview]Cytoplasmic molecular chaperones in Pseudomonas species
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Hyunhee Kim , Seongjoon Moon , Soojeong Ham , Kihyun Lee , Ute Römling , Changhan Lee
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J. Microbiol. 2022;60(11):1049-1060. Published online November 1, 2022
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DOI: https://doi.org/10.1007/s12275-022-2425-0
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491
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Pseudomonas is widespread in various environmental and host
niches. To promote rejuvenation, cellular protein homeostasis
must be finely tuned in response to diverse stresses, such as
extremely high and low temperatures, oxidative stress, and
desiccation, which can result in protein homeostasis imbalance.
Molecular chaperones function as key components that
aid protein folding and prevent protein denaturation. Pseudomonas,
an ecologically important bacterial genus, includes
human and plant pathogens as well as growth-promoting
symbionts and species useful for bioremediation. In this review,
we focus on protein quality control systems, particularly
molecular chaperones, in ecologically diverse species of Pseudomonas,
including the opportunistic human pathogen Pseudomonas
aeruginosa, the plant pathogen Pseudomonas syringae,
the soil species Pseudomonas putida, and the psychrophilic
Pseudomonas antarctica.
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Zhijie Xie, Fang Deng, Yuqin Wan, Yiping Luo, Qin Cao, Yichao Chen, Dong Li
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Haifeng Wang, Chenyang Sun, Xing Chen, Kai Yan, Hongxuan He
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Development of heat-shock resistance in
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modeled by experimental evolution
Jeffrey Liang, Gillian Cameron, Sébastien P. Faucher, Christopher A. Elkins
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- NOTE] Glyoxal Detoxification in Escherichia coli K-12 by NADPH Dependent Aldo-keto Reductases
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Changhan Lee , Insook Kim , Chankyu Park
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J. Microbiol. 2013;51(4):527-530. Published online August 30, 2013
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DOI: https://doi.org/10.1007/s12275-013-3087-8
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220
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15
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Glyoxal (GO) and methylglyoxal (MG) are reactive carbonyl compounds that are accumulated in vivo through various pathways. They are presumably detoxified through multiple pathways including glutathione (GSH)-dependent/independent glyoxalase systems and NAD(P)H dependent reductases. Previously, we reported an involvement of aldo-ketoreductases (AKRs) in MG detoxification. Here, we investigated the role of various AKRs (YqhE, YafB, YghZ, YeaE, and YajO) in GO metabolism. Enzyme activities of the AKRs to GO were measured, and GO sensitivities of the corresponding mutants were compared. In addition, we examined inductions of the AKR genes by GO. The results indicate that AKRs efficiently detoxify GO, among which YafB, YghZ, and YeaE are major players.
- NOTE] Mutations Upregulating the flhDC Operon of Escherichia coli K-12
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Changhan Lee , Chankyu Park
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J. Microbiol. 2013;51(1):140-144. Published online March 2, 2013
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DOI: https://doi.org/10.1007/s12275-013-2212-z
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279
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Abstract
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Bacterial motility is governed by the flhDC master operon that is under the control of factors like OmpR, LrhA, HdfR, and H-NS. Previously, derivatives of the wild-type MG1655 strain of E. coli K-12 with enhanced motility were found to contain insertion sequences (ISs) in the regulatory region of the flhDC operon. Here, we report that not only integrations of IS insertion sequences into the regulatory region of the flhDC operon, but also a missense mutation in the lrhA gene enhances motility by relieving transcriptional repression of the flhDC operon. Two novel IS insertions were found upstream of flhDC. So far, the relationships between the transacting factors and the cis-acting regulatory sequences associated with the flhDC operon have not been clearly established. In this study, it was found that effects of the cis- and trans-acting mutations were acting in parallel, suggesting their apparently independent regulation of flagellar expression.
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Citations
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Role of a single MCP in evolutionary adaptation of
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Adam James Waite, Nicholas W. Frankel, Thierry Emonet
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Marine Caby, Sébastien Bontemps-Gallo, Peggy Gruau, Brigitte Delrue, Edwige Madec, Jean-Marie Lacroix
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Zhongge Zhang, Chika Kukita, M. Zafri Humayun, Milton H Saier
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Hannes Breddermann, Karin Schnetz
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Birgit M. Prüß, William Margolin
Journal of Bacteriology.2017;[Epub] CrossRef - Spontaneous mutations in the flhD operon generate motility heterogeneity in Escherichia coli biofilm
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YjjQ Represses Transcription of
flhDC
and Additional Loci in Escherichia coli
Helene Wiebe, Doreen Gürlebeck, Jana Groß, Katrin Dreck, Derk Pannen, Christa Ewers, Lothar H. Wieler, Karin Schnetz, R. L. Gourse
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Karen A. Fahrner, Howard C. Berg, R. L. Gourse
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Devon M. Fitzgerald, Richard P. Bonocora, Joseph T. Wade, Lotte Søgaard-Andersen
PLoS Genetics.2014; 10(10): e1004649. CrossRef - OmpR and RcsB abolish temporal and spatial changes in expression of flhD in Escherichia coli Biofilm
Priyankar Samanta, Emily R Clark, Katie Knutson, Shelley M Horne, Birgit M Prüß
BMC Microbiology.2013;[Epub] CrossRef
- Development of a Suicidal Vector-Cloning System Based on Butanal Susceptibility Due to an Expression of YqhD Aldehyde Reductase
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Changhan Lee , Chankyu Park
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J. Microbiol. 2012;50(2):249-255. Published online April 27, 2012
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DOI: https://doi.org/10.1007/s12275-012-1438-5
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234
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Abstract
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Previously, we observed butanal/propanal sensitivity of
Escherichia coli K-12 when cells overexpress YqhD protein,
a NADPH dependent aldehyde reductase, possibly due to
an accumulation of butanol/propanol in vivo as the reaction
products. Based on this finding, we developed a suicidal
vector-cloning system derived from pUC19, in which lacZ
was substituted with the yqhD gene. As a result, when foreign
DNA was inserted into its multiple cloning sites by disrupting
an expression of YqhD, the recombinants survived on
butanal/propanal containing plate, whereas cells containing
the YqhD vector died because of the alcohol production
by YqhD. The cloning efficiency, estimated based on colony
PCR and enzyme digestion, was achieved more than 90%
when the suicidal vector system was used. Moreover, the
plasmid vector itself was stably maintained in the cell, presumably
due to its ability to remove toxic aldehydes being
accumulated in E. coli cell by metabolic stress.
- Screening of Genes Related to Methylglyoxal Susceptibility
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Insook Kim , Joonho Kim , Bumchan Min , Changhan Lee , Chankyu Park
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J. Microbiol. 2007;45(4):339-343.
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DOI: https://doi.org/2563 [pii]
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Abstract
PDF
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Methylglyoxal (MG) is a reactive metabolite known to accumulate in certain physiological conditions. We attempted to isolate genes associated with this metabolite by genome-wide mutagenesis with TnphoA derivative. After screening on methylglyoxal-containing plate, we obtained insertions in three different genes, ydbD, yjjQ, and yqiI, which gave rise to reproducible MG-sensitive phenotypes in glyoxalase-deficient strain. In addition to its MG sensitivity, the insertion in yqiI exhibited an impaired motility resulting from a reduced flagellar expression.
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