Dankookia rubra gen. nov., sp. nov., an alphaproteobacterium isolated from sediment of a shallow stream

Wan-Hoe Kim; Do-hak Kim; Keunsoo Kang; Tae-Young Ahn

doi:10.1007/s12275-016-6054-3

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Dankookia rubra gen. nov., sp. nov., an alphaproteobacterium isolated from sediment of a shallow stream: Wan-Hoe Kim , Do-hak Kim , Keunsoo Kang , Tae-Young Ahn; Journal of Microbiology 2016;54(6):420-425.
DOI: https://doi.org/10.1007/s12275-016-6054-3
Published online: May 27, 2016

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan 31116, Republic of KoreaDepartment of Microbiology, College of Natural Sciences, Dankook University, Cheonan 31116, Republic of Korea

Corresponding author: Tae-Young Ahn , Tel: +82-41-550-3451,

Received: 2 February 2016 • Revised: 14 April 2016 • Accepted: 27 April 2016

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Abstract

WS-10T–a Gram-negative, non-motile, and aerobic bacterial strain–was isolated from the sediment of a shallow stream in Korea. The optimum ranges of temperature and pH for growth were 20–40°C (optimum 28°C) and pH 6.0–8.0 (optimum pH 7.0), respectively. The DNA G+C content of strain WS-10T was 72.7 mol%. The major fatty acids (>5%) were summed feature 8 (C18:1 ω7c), summed feature 3 (C16:1 ω7c and/or C16:1 ω6c), C16:0, and C18:1 2-OH. The major polar lipids consisted of phosphatidylcholine, phosphatidylglycerol, phosphatidylethanolamine, and unidentified aminolipids. Q-10 was the predominant respiratory quinone. The highest similarities in the 16S rRNA gene sequence were shown with Paracraurococcus ruber (95.3%), Belnapia soli (95.3%), B. moabensis (95.1%), and B. rosea (95.0%). A phylogenetic analysis based on 16S rRNA gene sequence comparisons showed that strain WS-10T formed a distinct line within a clade containing the genera Paracraurococcus, Craurococcus, and Belnapia in the family Acetobacteraceae. On the basis of polyphasic evidence, strain WS-10T represents a novel species of a new genus in the family Acetobacteraceae, for which the name Dankookia rubra gen. nov., sp. nov. is proposed. The type strain of the type species is WS-10T (= KACC 18533T = JCM 30602T).

Keywords: Dankookia rubra;alphaproteobacterium

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Dankookia rubra gen. nov., sp. nov., an alphaproteobacterium isolated from sediment of a shallow stream

J. Microbiol. 2016;54(6):420-425. Published online May 27, 2016

DOI: https://doi.org/10.1007/s12275-016-6054-3

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