Abstract
The Gram-negative, strictly aerobic, non-motile, non-spore-forming, rod shaped bacterial strain designated TR6-03T was isolated from compost, and its taxonomic position was investigated by using a polyphasic approach. Strain TR6-03T grew at 4-42°C and at pH 6.0-8.0 on R2A and nutrient agar without NaCl supplement. Strain TR6-03T had β-glucosidase activity, which was responsible for its ability to transform ginsenoside Re (one of the dominant active components of ginseng) to Rg2. On the basis of 16S rRNA gene sequence similarity, strain TR6-03T was shown to belong to the family Sphingobacteriaceae and to be related to Mucilaginibacter lappiensis ANJLI2T (96.3% sequence similarity), M. dorajii FR-f4T (96.1%), and M. rigui WPCB133T (94.1%). The G+C content of the genomic DNA was 45.6%. The predominant respiratory quinone was MK-7 and the major fatty acids were summed feature 3 (comprising C16:1 ω7c and/or iso-C15:0 2OH), iso-C15:0 and iso-C17:0 3OH. DNA and chemotaxonomic data supported the affiliation of strain TR6-03T to the genus Mucilaginibacter. Strain TR6-03T could be differentiated genotypically and phenotypically from the recognized species of the genus Mucilaginibacter. The isolate therefore represents a novel species, for which the name Mucilaginibacter composti sp. nov. is proposed, with the type strain TR6-03T (=KACC 14956T =KCTC 12642T =LMG 23497T).
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- Engineered β-glycosidase from Hyperthermophilic Sulfolobus solfataricus with Improved Rd-hydrolyzing Activity for Ginsenoside Compound K Production
Chenchen Fu, Wenfeng Shen, Weina Li, Pan Wang, Luo Liu, Yangfang Dong, Jing He, Daidi Fan
Applied Biochemistry and Biotechnology.2024; 196(7): 3800. CrossRef - Novel glycosidase from Paenibacillus lactis 154 hydrolyzing the 28-O-β-d-glucopyranosyl ester bond of oleanane-type saponins
Zongzhan Wu, Wenyu Dou, Xiaolin Yang, Tengfei Niu, Zhuzhen Han, Li Yang, Rufeng Wang, Zhengtao Wang
Applied Microbiology and Biotechnology.2024;[Epub] CrossRef - Conversion of Glycosylated Platycoside E to Deapiose-Xylosylated Platycodin D by Cytolase PCL5
Kyung-Chul Shin, Dae Wook Kim, Hyun Sim Woo, Deok-Kun Oh, Yeong-Su Kim
International Journal of Molecular Sciences.2020; 21(4): 1207. CrossRef -
Mucilaginibacter agri sp. nov. and Mucilaginibacter humi sp. nov., isolated from soil
Ye Lin Seo, Shehzad Abid Khan, Hyung Min Kim, Byung Hee Chun, Dong Min Han, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(8): 4616. CrossRef - Mucilaginibacter xinganensis sp. nov., a phenanthrene-degrading bacterium isolated from wetland soil
Min-zhi Jiang, Zhi-jun Qiu, Guang-wu Zhang, Shi-yin Gao, Xiao-yan You, Ying-fei Ma
Antonie van Leeuwenhoek.2019; 112(4): 641. CrossRef - Mucilaginibacter terrigena sp. nov. sp., A Novel Member of the Family Sphingobacteriaceae
Leonid N. Ten, Na Yeong Jeon, Weilan Li, Young-Je Cho, Myung Kyum Kim, Seung-Yeol Lee, Alejandro P. Rooney, Hee-Young Jung
Current Microbiology.2019; 76(10): 1152. CrossRef - Mucilaginibacter endophyticus sp. nov., an endophytic polysaccharide-producing bacterium isolated from a stem of Miscanthus sinensis
Zhendong Zhang, Feng Sun, Yan Chen, Lunguang Yao, Zhaojin Chen, Wei Tian
Antonie van Leeuwenhoek.2019; 112(7): 1087. CrossRef - Complete Biotransformation of Protopanaxadiol-Type Ginsenosides to 20-O-β-Glucopyranosyl-20(S)-protopanaxadiol Using a Novel and Thermostable β-Glucosidase
Kyung-Chul Shin, Tae-Hun Kim, Ji-Hyeon Choi, Deok-Kun Oh
Journal of Agricultural and Food Chemistry.2018; 66(11): 2822. CrossRef -
Mucilaginibacter craterilacus sp. nov., isolated from sediment soil of a crater lake
Keun Chul Lee, Kwang Kyu Kim, Mi Kyung Eom, Jong-Shik Kim, Dae-Shin Kim, Suk-Hyung Ko, Seung-Hoon Yang, Jung-Sook Lee
International Journal of Systematic and Evolutionary Microbiology
.2017; 67(8): 2891. CrossRef - Classification of glycosidases that hydrolyze the specific positions and types of sugar moieties in ginsenosides
Kyung-Chul Shin, Deok-Kun Oh
Critical Reviews in Biotechnology.2016; 36(6): 1036. CrossRef - Proposal of Mucilaginibacter phyllosphaerae sp. nov. isolated from the phyllosphere of Galium album
Ebru L. Aydogan, Hans-Jürgen Busse, Gerald Moser, Christoph Müller, Peter Kämpfer, Stefanie P. Glaeser
International Journal of Systematic and Evolutionary Microbiology.2016; 66(10): 4138. CrossRef - Mucilaginibacter pocheonensis sp. nov., with ginsenoside-converting activity, isolated from soil of a ginseng-cultivating field
Yan Zhao, Hyung-Gwan Lee, Soo-Ki Kim, Hongshan Yu, Fengxie Jin, Wan-Taek Im
International Journal of Systematic and Evolutionary Microbiology.2016; 66(8): 2862. CrossRef -
Mucilaginibacter pedocola sp. nov., isolated from a heavy-metal-contaminated paddy field
Jingwei Tang, Jing Huang, Zixu Qiao, Rui Wang, Gejiao Wang
International Journal of Systematic and Evolutionary Microbiology
.2016; 66(10): 4033. CrossRef -
Mucilaginibacter
puniceus sp. nov., isolated from wetland freshwater
Ji Hee Lee, Mi Sun Kim, Joo Won Kang, Keun Sik Baik, Chi Nam Seong
International Journal of Systematic and Evolutionary Microbiology
.2016; 66(11): 4549. CrossRef - Simple and efficient preparation of ginsenoside (S)-Rg2 from ginsenoside Re by biotransformation withCellulosimicrobiumsp. 21
Juan Gao, Yanbo Hu, Yue Meng, Fanlin Meng, Xiaoqing Guo, Nan Wang, Min Wei, Yifa Zhou
Biocatalysis and Biotransformation.2015; 33(1): 51. CrossRef - Sphingosinicella ginsenosidimutans sp. nov., with ginsenoside converting activity
Jin-Kwang Kim, Myung-Suk Kang, Sung Chul Park, Kyeng-Min Kim, Kangduk Choi, Min-Ho Yoon, Wan-Taek Im
Journal of Microbiology.2015; 53(7): 435. CrossRef -
Mucilaginibacter gotjawali sp. nov., isolated from soil of a lava forest
Keun Chul Lee, Kwang Kyu Kim, Mi Kyung Eom, Jong-Shik Kim, Dae-Shin Kim, Suk-Hyung Ko, Jung-Sook Lee
International Journal of Systematic and Evolutionary Microbiology
.2015; 65(Pt_3): 952. CrossRef -
Mucilaginibacter polytrichastri sp. nov., isolated from a moss (Polytrichastrum formosum), and emended description of the genus Mucilaginibacter
Xin Yao Chen, Ran Zhao, Yang Tian, Bi He Kong, Xue Dong Li, Zhi Ling Chen, Yan Hong Li
International Journal of Systematic and Evolutionary Microbiology
.2014; 64(Pt_4): 1395. CrossRef -
Mucilaginibacter pineti sp. nov., isolated from Pinus pinaster wood from a mixed grove of pines trees
Gabriel Paiva, Pedro Abreu, Diogo Neves Proença, Susana Santos, Maria Fernanda Nobre, Paula V. Morais
International Journal of Systematic and Evolutionary Microbiology
.2014; 64(Pt_7): 2223. CrossRef -
Mucilaginibacter defluvii sp. nov., isolated from a dye wastewater treatment facility
Yeoung Min Hwang, Keun Sik Baik, Chi Nam Seong
International Journal of Systematic and Evolutionary Microbiology
.2014; 64(Pt_2): 565. CrossRef -
Mucilaginibacter soyangensis sp. nov., isolated from a lake
Yochan Joung, Haneul Kim, Heeyoung Kang, Beom-Il Lee, Tae-Seok Ahn, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology
.2014; 64(Pt_2): 413. CrossRef -
Mucilaginibacter auburnensis sp. nov., isolated from a plant stem
Peter Kämpfer, Hans-Jürgen Busse, John A. McInroy, Stefanie P. Glaeser
International Journal of Systematic and Evolutionary Microbiology
.2014; 64(Pt_5): 1736. CrossRef - Bacterial transformation of terpenoids
V V Grishko, Y M Nogovitsina, I B Ivshina
Russian Chemical Reviews.2014; 83(4): 323. CrossRef -
Mucilaginibacter
koreensis sp. nov., isolated from leaf mould
Cheol Su Park, Kyudong Han, Tae-Young Ahn
International Journal of Systematic and Evolutionary Microbiology
.2014; 64(Pt_7): 2274. CrossRef - Identification and Characterization of a Ginsenoside-Transforming β-Glucosidase from Pseudonocardia sp. Gsoil 1536 and Its Application for Enhanced Production of Minor Ginsenoside Rg2(S)
Juan Du, Chang-Hao Cui, Sung Chul Park, Jin-Kwang Kim, Hong-Shan Yu, Feng-Xie Jin, Changkai Sun, Sun-Chang Kim, Wan-Taek Im, Luis Menéndez-Arias
PLoS ONE.2014; 9(6): e96914. CrossRef - Mucilaginibacter calamicampi sp. nov., a member of the family Sphingobacteriaceae isolated from soil at a field of reeds
Jung-Hoon Yoon, Sooyeon Park, Yong-Taek Jung
Antonie van Leeuwenhoek.2013; 104(1): 37. CrossRef -
Mucilaginibacter jinjuensis sp. nov., with xylan-degrading activity
Haji Khan, Eu Jin Chung, Dong Young Kang, Che Ok Jeon, Young Ryun Chung
International Journal of Systematic and Evolutionary Microbiology
.2013; 63(Pt_4): 1267. CrossRef - Mucilaginibacter ginsenosidivorax sp. nov., with ginsenoside converting activity isolated from sediment
Jin-Kwang Kim, Tae-Eun Choi, Qing-Mei Liu, Hye-Yoon Park, Tae-Hoo Yi, Min-Ho Yoon, Sun-Chang Kim, Wan-Taek Im
Journal of Microbiology.2013; 51(3): 394. CrossRef -
Mucilaginibacter
herbaticus sp. nov., isolated from the rhizosphere of the medicinal plant Angelica sinensis
Hae-Ran Lee, Song-Ih Han, Ki-Hyeong Rhee, Kyung-Sook Whang
International Journal of Systematic and Evolutionary Microbiology
.2013; 63(Pt_8): 2787. CrossRef - Sphingomonas ginsenosidivorax sp. nov., with the ability to transform ginsenosides
Xue-Feng Jin, Jin-Kwang Kim, Qing-Mei Liu, Myung-Suk Kang, Dan He, Feng-Xie Jin, Sun-Chang Kim, Wan-Taek Im
Antonie van Leeuwenhoek.2013; 103(6): 1359. CrossRef - Lactobacillus ginsenosidimutans sp. nov., isolated from kimchi with the ability to transform ginsenosides
Hae-Min Jung, Qing-Mei Liu, Jin-Kwang Kim, Sung-Taik Lee, Sun-Chang Kim, Wan-Taek Im
Antonie van Leeuwenhoek.2013; 103(4): 867. CrossRef -
Mucilaginibacter
gynuensis sp. nov., isolated from rotten wood
Haji Khan, Eu Jin Chung, Che Ok Jeon, Young Ryun Chung
International Journal of Systematic and Evolutionary Microbiology
.2013; 63(Pt_9): 3225. CrossRef -
Mucilaginibacter
sabulilitoris sp. nov., isolated from marine sand in a firth
Chul-Hyung Kang, Yong-Taek Jung, Jung-Hoon Yoon
International Journal of Systematic and Evolutionary Microbiology
.2013; 63(Pt_8): 2865. CrossRef - List of new names and new combinations previously effectively, but not validly, published
International Journal of Systematic and Evolutionary Microbiology
.2011; 61(11): 2563. CrossRef