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[Protocol] Development of DNA aptamers specific for small therapeutic peptides using a modified SELEX method
Jaemin Lee , Minkyung Ryu , Dayeong Bae , Hong-Man Kim , Seong-il Eyun , Jeehyeon Bae , Kangseok Lee
J. Microbiol. 2022;60(7):659-667.   Published online June 22, 2022
DOI: https://doi.org/10.1007/s12275-022-2235-4
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AbstractAbstract
Aptamers are short single-stranded DNA or RNA oligonucleotides capable of binding with high affinity and specificity to target molecules. Because of their durability and ease of synthesis, aptamers are used in a wide range of biomedical fields, including the diagnosis of diseases and targeted delivery of therapeutic agents. The aptamers were selected using a process called systematic evolution of ligands by exponential enrichment (SELEX), which has been improved for various research purposes since its development in 1990. In this protocol, we describe a modified SELEX method that rapidly produces high aptamer screening yields using two types of magnetic beads. Using this method, we isolated an aptamer that specifically binds to an antimicrobial peptide. We suggest that by conjugating a small therapeutic-specific aptamer to a gold nanoparticle-based delivery system, which enhances the stability and intracellular delivery of peptides, aptamers selected by our method can be used for the development of therapeutic agents utilizing small therapeutic peptides.

Citations

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  • Recent approaches in the application of antimicrobial peptides in food preservation
    Satparkash Singh, Bhavna Jha, Pratiksha Tiwari, Vinay G. Joshi, Adarsh Mishra, Yashpal Singh Malik
    World Journal of Microbiology and Biotechnology.2024;[Epub]     CrossRef
  • Design and application of microfluidics in aptamer SELEX and Aptasensors
    Shikun Zhang, Yingming Zhang, Zhiyuan Ning, Mengxia Duan, Xianfeng Lin, Nuo Duan, Zhouping Wang, Shijia Wu
    Biotechnology Advances.2024; 77: 108461.     CrossRef
  • Nanogenosensors based on aptamers and peptides for bioelectrochemical cancer detection: an overview of recent advances in emerging materials and technologies
    Babak Mikaeeli Kangarshahi, Seyed Morteza Naghib
    Discover Applied Sciences.2024;[Epub]     CrossRef
  • Recent progress of SELEX methods for screening nucleic acid aptamers
    Chao Zhu, Ziru Feng, Hongwei Qin, Lu Chen, Mengmeng Yan, Linsen Li, Feng Qu
    Talanta.2024; 266: 124998.     CrossRef
  • Aptamer-conjugated gold nanoparticles platform as the intracellular delivery of antibodies for cancer therapy
    Ji-Hyun Yeom, Eunkyoung Shin, Hanyong Jin, Haifeng Liu, Yongyang Luo, Youngwoo Nam, Minkyung Ryu, Wooseok Song, Heeyoun Chi, Jeongkyu Kim, Kangseok Lee, Jeehyeon Bae
    Journal of Industrial and Engineering Chemistry.2023; 126: 480.     CrossRef
  • Regulation of transforming growth factor-β signaling as a therapeutic approach to treating colorectal cancer
    Jana Maslankova, Ivana Vecurkovska, Miroslava Rabajdova, Jana Katuchova, Milos Kicka, Michala Gayova, Vladimir Katuch
    World Journal of Gastroenterology.2022; 28(33): 4744.     CrossRef

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