- Parahaliea maris sp. nov., isolated from surface seawater and emended description of the genus Parahaliea
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Yang Liu , Juan Du , Jun Zhang , Qiliang Lai , Zongze Shao , Honghui Zhu
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J. Microbiol. 2020;58(2):92-98. Published online January 29, 2020
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DOI: https://doi.org/10.1007/s12275-020-9405-z
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A Gram-stain-negative, strictly aerobic, short-rod-shaped,
and non-motile bacterial strain designated HSLHS9T was
isolated from surface seawater collected from the South China
Sea. Strain HSLHS9T could grow at 15–41°C (optimum 28°C),
at pH 5.0–9.0 (optimum 6.0–7.0), and in 0–7% (w/v) NaCl
(optimum 2–3%). Phylogenetic analysis based on 16S rRNA
gene sequences indicated that strain HSLHS9T shared high
identities with the closely related Parahaliea aestuarii S2-26T
(98.6%) and Parahaliea mediterranea 7SM29T (97.8%) and
formed a distinct lineage within the genus Parahaliea. Wholegenome
sequencing of strain HSLHS9T revealed the size of 4.8
Mbp and DNA G + C content of 61.8 mol%. Strain HSLHS9T
shared the digital DNA-DNA hybridization values of 22.4%
and 23.0%, and the average nucleotide identities of 79.7%
and 79.9%, respectively, with the two type strains above. The
predominant cellular fatty acids of the strain were summed
feature 8 (C18:1 ω6c and/or C18:1 ω7c), summed feature 3 (C16:1
ω7c and/or C16:1 ω6c), C17:1 ω8c, and C16:0. The sole isoprenoid
quinone was identified as Q-8. The polar lipids were phosphatidylglycerol,
diphosphatidylglycerol, phosphatidylethanolamine,
aminolipid, and two glycolipids. Based on taxonomic
data obtained in this study, it is suggested that strain
HSLHS9T represents a novel species of the genus Parahaliea,
for which the name Parahaliea maris sp. nov. is proposed.
The type strain is HSLHS9T (= MCCC 1A06717T = KCTC
52307T). An emended description of the genus Parahaliea
is also provided.
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Citations
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International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - List of new names and new combinations previously effectively, but not validly, published
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- Lysobacter tyrosinelyticus sp. nov. isolated from Gyeryongsan national park soil
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Juan Du , Hina Singh , Hien T.T. Ngo , KyungHwa Won , Ki-Young Kim , Tae-Hoo Yi
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J. Microbiol. 2015;53(6):365-370. Published online May 30, 2015
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DOI: https://doi.org/10.1007/s12275-015-4729-9
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1,017
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Abstract
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A novel Gram-negative, rod-shaped (0.2-0.5 um x 1.5-2.5 um), aerobic, non-motile bacterium was isolated from Gyeryongsan
national park soil, Republic of Korea. The novel
isolate was designated as THG-DN8.2T. The strain grows
optimally at 28oC, at pH 7 and in the absence of NaCl.
Phylogenetic analysis based on 16S rRNA gene sequence
showed that the novel isolate shared the highest sequence
similarity with Lysobacter oryzae KCTC 22249T followed by
Lysobacter yangpyeongensis KACC 11407T and Lysobacter
niabensis KACC 11587T. The DNA G+C content of strain
THG-DN8.2T is 66.0 mol% and ubiquinone Q-8 is the main
isoprenoid quinone. The major polar lipids were diphosphatidylglycerol,
phosphatidylglycerol, phosphatidylethanolamine,
and phosphatidyl-N-methylethanolamine. The
major fatty acids of strain THG-DN8.2T were identified as
iso-C15:0, iso-C16:0, and C16:1w7c alcohol. The phylogenetic
distinctiveness and phenotypic characteristics differentiated
strain THG-DN8.2T from closely related Lysobacter species.
The results of polyphasic taxonomic analysis suggest that
strain THG-DN8.2T represents a novel species of the genus
Lysobacter, for which the name Lysobacter tyrosinelyticus
sp. nov. is proposed. The type strain is THG-DN8.2T (=KCTC
42235T =JCM 30320T).
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Citations
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So-Yeon Lee, Pil Soo Kim, Hojun Sung, Dong-Wook Hyun, Jin-Woo Bae
Journal of Microbiology.2022; 60(5): 469. CrossRef - Application of Bioorganic Fertilizer on Panax notoginseng Improves Plant Growth by Altering the Rhizosphere Microbiome Structure and Metabolism
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Journal of Microbiology.2021; 59(8): 709. CrossRef - Analysis of the Intestinal Flora in Male Versus Female Swamp Eels (Monopterus albus)
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Applied Microbiology and Biotechnology.2016; 100(12): 5581. CrossRef - Diversity and Activity of Lysobacter Species from Disease Suppressive Soils
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Frontiers in Microbiology.2015;[Epub] CrossRef
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