- Edaphovirga cremea gen. nov., sp. nov., isolated from the rhizospheric soil of Codonopsis clematidea
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Jin-Yan Xue , Meng-Yue Zhang , Yu Zhang , Juan Cheng , Li-Cheng Liu , Ying-Ying Wu , Tian-Yuan Zhang , Yi-Xuan Zhang
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J. Microbiol. 2019;57(5):337-342. Published online February 26, 2019
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DOI: https://doi.org/10.1007/s12275-019-8408-0
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A Gram-negative, facultatively anaerobic, non-motile, nonspore-
forming, coccoid or rod-shaped and creamy-pigmented
bacterium, designated SYP-B2100T, was isolated from the rhizospheric
soil of Codonopsis clematidea in the Xinjiang Uygur
Autonomous Region, China. The optimal growth occurred
at 28°C, pH 5.0, in the absence of NaCl. The cells tested positive
in catalase and methyl red tests but negative in oxidase,
urease, gelatinase, milk coagulation, and peptonisation, H2S
production, nitrate reduction, and Voges-Proskauer tests. The
major isoprenoid quinone was ubiquinone-8 (Q-8). The major
cellular fatty acids were C16:0 and summed feature 8. The
polar lipids consisted of diphosphatidylglycerol, phosphatidylethanolamine,
and phosphatidylglycerol. The 16S rRNA
gene sequence of strain SYP-B2100T was the most similar to
that of Rahnella inusitata DSM 30078T (96.9%) within the
family Enterobacteriaceae. The genomic DNA G+C content
of strain SYP-B2100T was 50.3 mol%. The combined data from
the phylogenetic, morphological, physiological, biochemical,
and chemotaxonomic analyses presented in this study support
the conclusion that strain SYP-B2100T represents a novel
species of a new genus, for which the name Edaphovirga cremea
gen. nov., sp. nov. is proposed; the type strain is SYPB2100T
(= CGMCC 1.5857T = DSM 105170T = KCTC 62024T).
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Citations
Citations to this article as recorded by 
- Validation list no. 225: valid publication of new names and new combinations effectively published outside the IJSEM
Aharon Oren, Markus Göker
International Journal of Systematic and Evolutionary Microbiology
.2025;[Epub] CrossRef - Discovery of New Angucyclin(on)e Derivatives and Their Genetic Architecture from Streptomyces sp. SYP-A7185 in the Rhizosphere Soil of Panax notoginseng
Jin-Yan Xue, Cai-Yun Wang, Ying-Ying Wu, Meng-Yue Zhang, Shuang Li, Xun-Yong Zhou, Yi-Xuan Zhang ACS Omega.2025; 10(47): 57711. CrossRef - Jejubacter calystegiae gen. nov., sp. nov., moderately halophilic, a new member of the family Enterobacteriaceae, isolated from beach morning glory
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- Leifsonia flava sp. nov., a novel actinobacterium isolated from the rhizosphere of Aquilegia viridiflora
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Ying Cai , Wen-Zhen Tao , Yu-Jun Ma , Juan Cheng , Meng-Yue Zhang , Yi-Xuan Zhang
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J. Microbiol. 2018;56(8):549-555. Published online July 25, 2018
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DOI: https://doi.org/10.1007/s12275-018-8061-z
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1,396
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Abstract
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SYP-B2174T is a yellow-pigmented, Gram-positive, non-motile,
and rod-shaped actinobacterium isolated from the rhizospheric
soil of Aquilegia viridiflora Pall. collected from the
Xinjiang uygur autonomous region of China. The strain’s
growth temperature ranges from 1 to 35°C, with an optimal
growth being observed at 28°C. Growth occurs from 0 to 5%
NaCl and at pH 6–8, with optimal growth being observed
in 1% NaCl at pH 7. Comparative 16S rRNA gene sequencebased
phylogenetic analysis placed the strain in a clade with
the species Leifsonia kafniensis JCM 17021T and Leifsonia psychrotolerans
DSM 22824T with similarities of 97.8 and 97.6%,
respectively. The DNA-DNA hybridization values of the strain
SYP-B2174T to its closest phylogenetic neighbors were significantly
lower than 35.7%. The strain was identified as a novel
species of the genus Leifsonia judging by the coryneform morphology,
peptidoglycans based upon 2,4-diaminobutyric acid,
principal phospholipids phosphatidylglycerol and diphosphatidylglycerol,
major menaquinone MK-11, predominant
fatty acids of anteiso-C15:0, anteiso-C17:0, and iso-C16:0, and a
DNA G + C base composition of 68.7 mol%, for which the
name Leifsonia flava sp. nov. is proposed. The type strain is
SYP-B2174T (= CGMCC 1.15856T = DSM 105144T = KCTC
39963T).
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Citations
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Shu-Ya Zuo, Lian-Shuang Xiong, Qing Yuan, Guo-Hua Chen, Rui Yang, Li-Song Wang, Cheng-Lin Jiang, Xin-Yu Wang, Yi Jiang Current Microbiology.2025;[Epub] CrossRef - Taxonomic rearrangement of Salinibacterium, Leifsonia, Diaminobutyricibacter, Antiquaquibacter, Homoserinimonas and Glaciibacter: refining genus boundaries and proposal of two new genera – Orlajensenia gen. nov. and Leifsonella gen. nov.
Maher Gtari, Dhouha Boussoufa, Faten Ghodhbane-Gtari, Imed Sbissi
International Journal of Systematic and Evolutionary Microbiology
.2025;[Epub] CrossRef - Validation list no. 225: valid publication of new names and new combinations effectively published outside the IJSEM
Aharon Oren, Markus Göker
International Journal of Systematic and Evolutionary Microbiology
.2025;[Epub] CrossRef - Enhancement of the germination and growth of Panicum miliaceum and Brassica juncea in Cd- and Zn-contaminated soil inoculated with heavy-metal-tolerant Leifsonia sp. ZP3
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Anna C. Simpson, Pratyay Sengupta, Flora Zhang, Asif Hameed, Ceth W. Parker, Nitin K. Singh, Georgios Miliotis, Punchappady D. Rekha, Karthik Raman, Christopher E. Mason, Kasthuri Venkateswaran Scientific Reports.2023;[Epub] CrossRef - Diversity of Culturable Bacteria Isolated from Highland Barley Cultivation Soil in Qamdo, Tibet Autonomous Region
HU PAN, JIE ZHOU, ZHUOMA DAWA, YANNA DAI, YIFAN ZHANG, HUI YANG, CHONG WANG, HUHU LIU, HUI ZHOU, XIANGYANG LU, YUN TIAN Polish Journal of Microbiology.2021; 70(1): 87. CrossRef - Unlocking the potential of plant growth-promoting rhizobacteria on soil health and the sustainability of agricultural systems
Zobia Khatoon, Suiliang Huang, Mazhar Rafique, Ali Fakhar, Muhammad Aqeel Kamran, Gustavo Santoyo Journal of Environmental Management.2020; 273: 111118. CrossRef - Notification of changes in taxonomic opinion previously published outside the IJSEM
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