- Lysobacter panacihumi sp. nov., isolated from ginseng cultivated soil
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Yue Huo , Jong-Pyo Kang , Joon Hurh , Yaxi Han , Jong-Chan Ahn , Ramya Mathiyalagan , Chunhong Piao , Deok-Chun Yang
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J. Microbiol. 2018;56(10):748-752. Published online September 28, 2018
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DOI: https://doi.org/10.1007/s12275-018-8202-4
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A Gram-negative, non-motile, aerobic, catalase-, and oxidasepositive
bacterial strain, designated DCY117T, was isolated
from ginseng cultivated soil in Gochang-gun, Republic of
Korea, and was characterized taxonomically using a multifaceted
approach. 16S rRNA gene sequence analysis revealed
that strain DCY117T showed highest similarity to Lysobacter
ruishenii CTN-1T (95.3%). Phylogenetic analysis revealed
that closely related relatives of strain DCY117T were L. aestuarii
S2-CT (95.1%), L. daejeonensis GH1-9T (95.0%), and
L. caeni BUT-8T (94.9%). Diphosphatidylglycerol (DPG),
phosphatidylglycerol (PG), and phosphatidylethanolamine
(PE) were the major polar lipids of strain DCY117T. The major
isoprenoid quinone was Q-8. The major cellular fatty
acids of strain DCY117T were iso-C15:0, iso-C16:0, and summed
feature 9 (comprising iso-C17:1 ω9c and/or 10-methyl-C16:0).
Genomic DNA G + C content was 61.8 mol%. On the basis of
our findings, strain DCY117T is a novel species in the genus
Lysobacter. We propose the name Lysobacter panacihumi sp.
nov., and the type strain is DCY117T (= KCTC 62019T = JCM
32168T).
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Citations
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International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef
- Rhodoferax koreense sp. nov, an obligately aerobic bacterium within the family Comamonadaceae, and emended description of the genus Rhodoferax
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Mohamed El-Agamy Farh , Yeon-Ju Kim , Priyanka Singh , Sun Young Jung , Jong-Pyo Kang , Deok-Chun Yang
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J. Microbiol. 2017;55(10):767-774. Published online September 28, 2017
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DOI: https://doi.org/10.1007/s12275-017-7033-z
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1,056
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Gram-staining-negative, uniflagellated, rod-shaped, designated
as DCY110T, was isolated from sludge located in Gangwon
province, Republic of Korea. The phylogenetic tree of 16S
rRNA gene sequence showed that the strain DCY110T belonged
to the genus Rhodoferax with a close similarity to Rhodoferax
saidenbachensis DSM 22694T (97.7%), Rhodoferax
antarcticus DSM 24876T (97.5%), Rhodoferax ferrireducens
DSM 15236T (97.3%), and Rhodoferax fermentans JCM 7819T
(96.7%). The predominant isoprenoid quinine was ubiquinone
(Q-8). DNA G + C content was 62.8 mol%. The major
polar lipids were phosphatidylethanolamine and two unidentified
phospholipids. The major fatty acids (> 10%) were
C12:0, C16:0, summed feature 3 (which comprised C16:1 ω7c
and/or C16:1 ω6c). The DNA-DNA relatedness values between
the strain DCY110T and the closely related relatives used in
this study were lower than 70%. Based on the following polyphasic
analysis, the strain DCY110T is considered as a novel
species of the genus Rhodoferax, for which the name Rhodoferax
koreense sp. nov. is proposed. The type strain is DCY-
110T (= KCTC 52288T = JCM 31441T).
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International Journal of Systematic and Evolutionary Microbiology
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