- Probing the ArcA Regulon in the Rumen Bacterium Mannheimia succiniciproducens by Genome-Wide Expression Profiling
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Seulgi Yun , Jong Moon Shin , Oh-Cheol Kim , Young Ryul Jung , Doo-Byoung Oh , Sang Yup Lee , Ohsuk Kwon
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J. Microbiol. 2012;50(4):665-672. Published online July 21, 2012
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DOI: https://doi.org/10.1007/s12275-012-2007-7
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In this study, the putative target genes of the Arc two-component system of the rumen bacterium Mannheimia succiniciproducens were determined by analyzing the transcriptome of the ArcA overexpression strain and by the in silico scanning of the entire genome sequence with the position weight matrix of the ArcA binding sequence developed for Escherichia coli. The majority of 79 repressed genes were involved in energy metabolism and carbohydrate transport and metabolism, while the majority of 82 induced genes were involved in hypothetical or unknown functions. Our results suggest that the Arc system in M. succiniciproducens has a specific function that differs from that in E. coli.
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Citations
Citations to this article as recorded by  - Diversification of signal identity and modus operandi of the Haemophilus influenzae PAS-less ArcB sensor kinase
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PLOS ONE.2024; 19(12): e0315238. CrossRef - Environmental adaptation and diversification of bacterial two-component systems
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Current Microbiology.2015; 70(1): 103. CrossRef
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