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Jinwook Lee 2 Articles
Crystal structure of the phage-encoded N-acetyltransferase in complex with acetyl-CoA, revealing a novel dimeric arrangement
Nayeon Ki , Inseong Jo , Yongseong Hyun , Jinwook Lee , Nam-Chul Ha , Hyun-Myung Oh
J. Microbiol. 2022;60(7):746-755.   Published online July 4, 2022
DOI: https://doi.org/10.1007/s12275-022-2030-2
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  • 3 Web of Science
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AbstractAbstract PDF
Bacteriophages employ diverse mechanisms to facilitate the proliferation of bacteriophages. The Salmonella-infecting phage SPN3US contains a putative N-acetyltransferase, which is widely found in bacteriophages. However, due to low sequence similarity to the N-acetyltransferases from bacteria and eukaryotic cells, the structure and function of phage-encoded acetyltransferases are mainly unknown. This study determines the crystal structure of the putative N-acetyltransferase of SPN3US in complex with acetyl-CoA. The crystal structure showed a novel homodimeric arrangement stabilized by exchanging the C-terminal α-helix within the dimer. The following biochemical analyses suggested that the phageencoded acetyltransferase might have a very narrow substrate specificity. Further studies are required to reveal the biochemical activity, which would help elucidate the interaction between the phage and host bacteria in controlling pathogenic bacteria.

Citations

Citations to this article as recorded by  
  • Characteristics of the smallest brucellaphage with strong lytic ability
    Hongbaiyu Liu, Youhong Zhong, Zhihong Zhang, Kehong Xu, Chunpeng Mao, Qiuju Yang, Lihua Yang, Binbin Yu, Ying Long, Xinyu Qin, Liyuan Shi, Sheng Chang, Yuanying Shen, Peng Wang
    Frontiers in Veterinary Science.2025;[Epub]     CrossRef
  • Structural basis for Salmonella infection by two Microviridae phages
    Wanlong Hu, Zhengjie Liu, Yuming Wei, Qucheng Bian, Weiqi Lan, Chongzheng Fan, Jiaoyang Song, Qianqian Sun, Xiaojie Zhang, Yuqing Liu, Yan Gao, Yibao Chen
    Communications Biology.2025;[Epub]     CrossRef
  • Posttranslational modifications in bacteria during phage infection
    Hannelore Longin, Nand Broeckaert, Vera van Noort, Rob Lavigne, Hanne Hendrix
    Current Opinion in Microbiology.2024; 77: 102425.     CrossRef
Crystal structure of the nuclease and capping domain of SbcD from Staphylococcus aureus
Jinwook Lee , Inseong Jo , Jinsook Ahn , Seokho Hong , Soyeon Jeong , Aeran Kwon , Nam-Chul Ha
J. Microbiol. 2021;59(6):584-589.   Published online April 20, 2021
DOI: https://doi.org/10.1007/s12275-021-1012-0
  • 1,019 View
  • 4 Download
  • 5 Web of Science
  • 4 Crossref
AbstractAbstract PDF
The SbcCD complex is an essential component of the DNA double-strand break (DSB) repair system in bacteria. The bacterial SbcCD complex recognizes and cleaves the DNA ends in DSBs by ATP-dependent endo- and exonuclease activities as an early step of the DNA repair process. SbcD consists of nuclease, capping, and helix-loop-helix domains. Here, we present the crystal structure of a SbcD fragment from Staphylococcus aureus, which contained nuclease and capping domains, at a resolution of 2.9 Å. This structure shows a dimeric assembly similar to that of the corresponding domains of SbcD from Escherichia coli. The S. aureus SbcD fragment exhibited endonuclease activities on supercoiled DNA and exonuclease activity on linear and nicked DNA. This study contributes to the understanding of the molecular basis for how bacteria can resist sterilizing treatment, causing DNA damage.

Citations

Citations to this article as recorded by  
  • A Cas12a Toolbox for Rapid and Flexible Group B Streptococcus Genomic Editing and CRISPRi
    G. H. Hillebrand, S. C. Carlin, E. J. Giacobe, H. A. Stephenson, J. Collins, T. A. Hooven
    Molecular Microbiology.2025; 124(5): 449.     CrossRef
  • Solvent-polarity-programmed chirality transfer in stereodiversified dipeptide-based self-assembly system with light-responsive circular dichroism property
    Minghao Wang, Hanting Wang, Shunjie Cheng, Yuanyuan Wang, Lukang Ji
    Colloids and Surfaces A: Physicochemical and Engineering Aspects.2025; 726: 137897.     CrossRef
  • Molecular characterisation of Toxoplasma gondii Mre11 reveals unique structural features and potential as a therapeutic target
    Diego M. Ruiz, Valeria R. Turowski, William J. Sullivan, Sergio O. Angel
    Scientific Reports.2025;[Epub]     CrossRef
  • Staphylococcus aureus SOS response: Activation, impact, and drug targets
    Kaiying Cheng, Yukang Sun, Huan Yu, Yingxuan Hu, Yini He, Yuanyuan Shen
    mLife.2024; 3(3): 343.     CrossRef

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