- Paenibacillus nuruki sp. nov., isolated from Nuruk, a Korean fermentation starter
-
Soo-Jin Kim , Hayoung Cho , Jae-Hyung Ahn , Hang-Yeon Weon , Jae-Ho Joa , Jeong-Seon Kim , Soon-Wo Kwon
-
J. Microbiol. 2019;57(10):836-841. Published online June 27, 2019
-
DOI: https://doi.org/10.1007/s12275-019-9118-3
-
-
1,078
View
-
0
Download
-
6
Web of Science
-
6
Crossref
-
 Abstract
 PDF
-
A Gram-stain-positive, rod-shaped, non-endospore-forming,
motile by means of peritrichous flagella, facultatively anaerobic
bacterium designated TI45-13arT was isolated from Nuruk,
a Korean traditional Makgeolli fermentation starter. It grew
at 4–35°C (optimum, 28–30°C), pH 5.0–9.0 (optimum, pH
7.0) and NaCl concentrations up to 5% (w/v). Phylogenetic
trees generated using 16S rRNA gene sequences revealed that
strain TI45-13arT belonged to the genus Paenibacillus and
showed the highest sequence similarities with Paenibacillus
kyungheensis DCY88T (98.5%), Paenibacillus hordei RH-N24T
(98.4%) and Paenibacillus nicotianae YIM h-19T (98.1%). The
major fatty acid was anteiso-C15:0. The DNA G+C content
was 39.0 mol%, and MK-7 was the predominant isoprenoid
quinone. The polar lipids were diphosphatidylglycerol, phosphatidylglycerol,
phosphatidylethanolamine, three unidentified
glycolipids, and one unidentified aminoglycolipid. The
cell-wall peptidoglycan contained meso-diaminopimelic acid.
On the basis of polyphasic taxonomy study, it was suggested
that strain TI45-13arT represents a novel species within the genus
Paenibacillus for which the name Paenibacillus nuruki
sp. nov. is proposed. The type strain was TI45-13arT (= KACC
18728T = NBRC 112013T).
-
Citations
Citations to this article as recorded by  - Anti-aging potential of the endophyte Paenibacillus nuruki in a Saccharomyces cerevisiae lifespan model
Yancho Zarev, Ivan Ivanov, Martin Dimitrov, Iliana Ionkova, Teodora Todorova
Pharmacia.2026;[Epub] CrossRef - Metagenomic and meta-metabolomic analysis of traditional Korean rice vinegar productions shows a large variability between producers
Louise Vermote, Byung Hee Chun, Shehzad Abid Khan, Luc De Vuyst, Che Ok Jeon, Stefan Weckx
International Journal of Food Microbiology.2025; 440: 111283. CrossRef -
Paenibacillus dendrobii sp. nov., an indole-3-acetic acid-producing endophytic bacterium isolated from Dendrobium nobile
Yadong Hu, Hongjie Li, Yaoyi Chen, Qiling Zhang, Shigang Zheng, Dan Rao, Ze Chun, Ruoxi Zhao
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Makgeolli - The Traditional Choice of Korean Fermented Beverage from Cereal: An Overview on its Composition and Health Benefits
Ganesh SHIMOGA, Sang-Youn KIM
Food Science and Technology.2022;[Epub] CrossRef - Integrative Metagenomics–Metabolomics for Analyzing the Relationship Between Microorganisms and Non-volatile Profiles of Traditional Xiaoqu
Chi Zhao, Wei Su, Yu Mu, Yingchun Mu, Li Jiang
Frontiers in Microbiology.2021;[Epub] CrossRef - Flaviflexus ciconiae sp. nov., isolated from the faeces of the oriental stork, Ciconia boyciana
Jae-Yun Lee, Woorim Kang, Pil Soo Kim, So-Yeon Lee, Na-Ri Shin, Hojun Sung, June-Young Lee, Ji-Hyun Yun, Yun-Seok Jeong, Jeong Eun Han, Mi-Ja Jung, Dong-Wook Hyun, Hyun Sik Kim, Euon Jung Tak, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology.2020; 70(10): 5439. CrossRef
- Soil pH and electrical conductivity are key edaphic factors shaping bacterial communities of greenhouse soils in Korea
-
Jeong Myeong Kim , An-Sung Roh , Seung-Chul Choi , Eun-Jeong Kim , Moon-Tae Choi , Byung-Koo Ahn , Sun-Kuk Kim , Young-Han Lee , Jae-Ho Joa , Seong-Soo Kang , Shin Ae Lee , Jae-Hyung Ahn , Jaekyeong Song , Hang-Yeon Weon
-
J. Microbiol. 2016;54(12):838-845. Published online November 26, 2016
-
DOI: https://doi.org/10.1007/s12275-016-6526-5
-
-
1,094
View
-
1
Download
-
154
Crossref
-
Abstract
PDF
-
Soil microorganisms play an essential role in soil ecosystem
processes such as organic matter decomposition, nutrient
cycling, and plant nutrient availability. The land use for greenhouse
cultivation has been increasing continuously, which
involves an intensive input of agricultural materials to enhance
productivity; however, relatively little is known about
bacterial communities in greenhouse soils. To assess the effects
of environmental factors on the soil bacterial diversity
and community composition, a total of 187 greenhouse soil
samples collected across Korea were subjected to bacterial
16S rRNA gene pyrosequencing analysis. A total of 11,865
operational taxonomic units at a 97% similarity cutoff level
were detected from 847,560 sequences. Among nine soil factors
evaluated; pH, electrical conductivity (EC), exchangeable
cations (Ca2+, Mg2+, Na+, and K+), available P2O5, organic
matter, and NO3-N, soil pH was most strongly correlated
with bacterial richness (polynomial regression, pH: R2 =
0.1683, P < 0.001) and diversity (pH: R2 = 0.1765, P < 0.001).
Community dissimilarities (Bray-Curtis distance) were positively
correlated with Euclidean distance for pH and EC
(Mantel test, pH: r = 0.2672, P < 0.001; EC: r = 0.1473, P < 0.001). Among dominant phyla (> 1%), the relative abundances
of Proteobacteria, Gemmatimonadetes, Acidobacteria,
Bacteroidetes, Chloroflexi, and Planctomycetes were also more
strongly correlated with pH and EC values, compared with
other soil cation contents, such as Ca2+, Mg2+, Na+, and K+.
Our results suggest that, despite the heterogeneity of various
environmental variables, the bacterial communities of
the intensively cultivated greenhouse soils were particularly
influenced by soil pH and EC. These findings therefore shed
light on the soil microbial ecology of greenhouse cultivation,
which should be helpful for devising effective management
strategies to enhance soil microbial diversity and improving
crop productivity.
-
Citations
Citations to this article as recorded by - The microbial mechanism of the impact of grazing degradation on the soil multifunctionality of the hummock wetland on the riverscape
Xiaoai Cao, Huamin Liu, Rui Zhang, Yunhao Wen, Shan Jiang, Zhichao Xu, Lu Wen, Yi Zhuo, Dongwei Liu, Ke Yu, Lixin Wang
Applied Soil Ecology.2026; 219: 106785. CrossRef - Spatial heterogeneity of soil phosphorus influencing bacterial functional adaptations in alkaline calcareous soils
Saira Tabbasum, Mahreen Yahya, Munir Zia, Midrar ul Haq, Samina Anwar, Usama Azeem Khan, Naima Mahreen, Khansa Ejaz, Mika Tapio Tarkka, Sumera Yasmin
Frontiers in Microbiology.2026;[Epub] CrossRef - Linking topography, soil physicochemical traits and bacterial community dynamics in a managed tea landscape
Manjistha Baruah, Unmona Sarmah, Sudipta Sankar Bora, Khomdram Niren Singh, Manuranjan Gogoi, Madhumita Barooah
International Microbiology.2026; 29(3): 331. CrossRef - Integrated UV-protective, water-resistant, and biodegradable core-shell micro/nanofiber mats enabling controlled repellent delivery for sustained pest management
Ertao Li, Chenglong Cui, Wenjie Shangguan, Yafei Qu, Zhimin Wang, Kebin Li, Jiao Yin
Chemical Engineering Journal.2026; 530: 173664. CrossRef - Effect of Dryland-to-Paddy Conversion on Soil Aggregate Phosphorus Fractions and Microbial Functional Diversity in a Typical Black Soil Region of the Sanjiang Plain
Bo Bo, Xinghong Liu, Zijian Xie, Chunhua Li, Yang Wang, Chun Ye
Microorganisms.2026; 14(3): 658. CrossRef - Synthetic bacterial community enhances pepper growth in waste stone powder by increasing available nutrient content and enriching beneficial rhizosphere microbes
Hongqing Wei, Cong Liu, Weizhong Wang, Fang Liu, Zhengmao Li, Xiukai Song, Jun Wang
Biocatalysis and Agricultural Biotechnology.2026; 74: 104061. CrossRef - Restoration of aquaculture ponds to coastal wetlands enhances bacterial resilience by reshaping community structure and interaction networks
Chengfeng Yu, Shengzhi Liu, Ziyi Zhou, Jingjing Li, Huan Zhang, Min Xu
Aquaculture.2026; 622: 744054. CrossRef - Mechanisms of Chlorella sorokiniana and Bacillus combination enhanced tomato (Solanum lycopersicum) growth and soil quality
Jinyu Zhao, Liheng Wu, Zhenliang Yu, Shuyan Liu, Wei Ma, Yanru Cui, Weixu Hou, Lina Wang, Xin Tian, Yue Sun, Jinlin Cai
Frontiers in Plant Science.2026;[Epub] CrossRef - Stabilization of Pb(Ⅱ), Cu(Ⅱ), and Ni(Ⅱ) by chitosan-modified ball-milled iron tailings: Mechanistic study on enrichment-induced potential polymetallic silicate formation
Ruijie Ge, Gaoyuan Gu, Yutong Liu, Chong Peng, Shuyi Yang, Yuanfei Wang, Yu Zhang, Tao E
Journal of Environmental Chemical Engineering.2026; 14(3): 122890. CrossRef - Phylogenetic Distribution and Predicted Functional and Ecological Shifts in Soil Bacterial Communities Along a Soda Saline–Alkali Wetland Degradation Gradient
Junnan Ding, Xue Cong, Xin Li
Life.2026; 16(5): 760. CrossRef - Changes in microbial diversity and its response to soil physicochemical properties in the different forest stands of Tongzhou, Beijing
Xiuzhong Li, Yufei Zhang, Senyang Li, Shuailing Hou, Muhammad Awais Rasool, Jialin Lei, Qiuying Chen, María Daniela Artigas Ramírez, Rafael Fernández Da Silva
Trees, Forests and People.2026; 26: 101327. CrossRef - Characterization of Bacterial Communities in Diverse Soil Types of the Makkah Region, Saudi Arabia: A 16S rDNA Sequencing and Physicochemical Analysis
Wafa A. Alshehri
Journal of Pure and Applied Microbiology.2026; 20(2): 1370. CrossRef - Soil carbon dynamics shape bacterial communities across grassland and agricultural soils with implications for phosphorus
Protik Banerjee, Harshad V. Kulkarni, Suprem R. Das, Saugata Datta, Allison M. Veach
Frontiers in Soil Science.2026;[Epub] CrossRef - Functional genetic potential of benthic microbial mat communities in Arctic, Antarctic, and sub-Antarctic lakes
Jill De Visscher, Bjorn Tytgat, Dominic A Hodgson, Annick Wilmotte, Anne Willems, Elie Verleyen, Wim Vyverman, Alexandre Anesio
FEMS Microbiology Ecology.2026;[Epub] CrossRef - Agro-Physiological and Phenological Responses of Chickpea (Cicer arietinum L.) to Irrigation with Diluted and Undiluted Treated Urban Wastewater
Radouane Soujoud, Aziz Oubenali, Khadija Oukta, Youssef Khachtib, Tawfik El Moussaoui, Sanaa Sabour Alaoui, Malika Ourribane
Journal of Crop Health.2026;[Epub] CrossRef - Identification of Plant Growth–Promoting Rhizobacteria Associated With Mexican Wild Pepper (Capsicum annuum L. var. glabriusculum)
Marielena Clark, Sergio de los Santos-Villalobos, Luis Fernando García-Ortega, Laura Mondragón-Camarillo, Ramiro Vílchez-Vargas, Kadiya Calderón, Corina Hayano-Kanashiro, Kalyani Sen
Applied and Environmental Soil Science.2026;[Epub] CrossRef - Microbial community transition and carbon metabolism plasticity under continuous evaporative salinization in hypersaline brines
Ya Zhang, Jiamin Liu, Mingxian Han, Jianrong Huang, Jiyu Chen, Zhuoli Zhao, Jian Yang, Dongmei Yu, Jibin Han, Xiying Zhang, Hongchen Jiang
Current Research in Microbial Sciences.2026; 11: 100654. CrossRef - Comparison of the rhizospheric soil bacteriomes of Oryza sativa and Solanum melongena crop cultivars reveals key genes and pathways involved in biosynthesis of ectoine, lysine, and catechol meta-cleavage
Manisha Mandal, Biswajit Ghosh, Shyamapada Mandal
Functional & Integrative Genomics.2025;[Epub] CrossRef - Dose-dependent effects of MIL-88A(Fe) and MIL-101(Fe) on arsenic immobilization and phytoremediation using ramie (Boehmeria nivea L.)
Jian Ye, Xingyan Yin, Chunping Yang, Xiaofei Tan, Chuang Li, Gaobin Chen, Ping Chen, Qiang Chen, Mingyang Dai
Chemical Engineering Journal.2025; 517: 164238. CrossRef - Assessment of soil quality in texturally different and salt-affected soils of trans-gangetic plains of India
Gitanjli Rathore, Vivek Sharma, Manpreet Kaur, B. B. Vashisht
Environmental Earth Sciences.2025;[Epub] CrossRef - Minimizing the potential risk of soil nitrogen loss through optimal fertilization practices in intensive agroecosystems
Jun Wang, Lu Zhang, Kailou Liu, Boku Zhou, Hongjun Gao, Xiaori Han, Shutang Liu, Shaomin Huang, Aijun Zhang, Keke Hua, Jidong Wang, Hangwei Hu, Minggang Xu, Wenju Zhang
Agronomy for Sustainable Development.2025;[Epub] CrossRef - DNA Extraction Methodology has a Limited Impact on Multitaxa Riverine Benthic Metabarcoding Community Profiles
Lindsay K. Newbold, Joe D. Taylor, Amy C. Thorpe, Jonathan Warren, Kerry Walsh, Daniel S. Read
Environmental DNA.2025;[Epub] CrossRef - Microbial Composition Change and Heavy Metal Accumulation in Response to Organic Fertilization Reduction in Greenhouse Soil
Qin Qin, Jun Wang, Lijuan Sun, Shiyan Yang, Yafei Sun, Yong Xue
Microorganisms.2025; 13(1): 203. CrossRef - Effects of different plant-derived fermentation products as soil amendments on microbial community structure and mitigation of soil degradation caused by replanting
Xinyue Miao, Pengyuan Lv, Lixiang Wang, Yi Zhou, Ergang Wang, Yu Zhan, Guixiang He, Zhiqi Liang, Jinglou Zhang, Changbao Chen, Qiong Li
Chemical and Biological Technologies in Agriculture.2025;[Epub] CrossRef - Effects of chemical fertilization on bacterial community in rhizosphere soil of sugarcane
Qian Wang, Shang-Tao Jiang, Juan Song, Yi-Hao Kang, Jin-Lian Zhang, Ting-Su Chen, Yang-Rui Li, Mahmoud W. Yaish
PLOS One.2025; 20(7): e0327545. CrossRef - NaCl-induced soil stress regulates the diversity of soil bacteria and their ability to metabolize low molecular weight organic acids
Adhari Al-Kalbani, Daniel Menezes-Blackburn, Jinan Waladwadi, Said Al-Ismaily, Buthaina Al-Siyabi
Journal of the Saudi Society of Agricultural Sciences.2025;[Epub] CrossRef - Analysis of the differences and driving factors of bacterial community structure and diversity in multiple habitats of the Qingshui River ecosystem in Ningxia, China
Zengfeng Zhao, Xiaocong Qiu, Juan Yin, Ruizhi Zhao
Ecotoxicology and Environmental Safety.2025; 303: 118947. CrossRef - Cascading Effects of Soil Properties, Microbial Stoichiometry, and Plant Phenology on Nematode Communities in Greenhouse Melons
Jing Ju, Peng Chen, Wei Mao, Xianglin Liu, Haitao Zhao, Ping Liu
Agronomy.2025; 16(1): 69. CrossRef - Plant identity and environmental filtering are the key drivers of bacterial community structure in four desert plant species from the Sahara Desert in Morocco
Hafsa Debbagh-Nour, Said Khourchi, Ayoub El Mouttaqi, Rachid Elfermi, Anass Bourazza, Oscar Pascal Malou, Marc Ducousso, Hassan Boukcim, Mohamed Hijri, Abdelaziz Hirich
BMC Microbiology.2025;[Epub] CrossRef - Impacts of continuous melon cropping on soil properties and microbial network restructuring
Runqiang Han, Yao Shi, Haojie Wang, Zuoyu Kuang, Daren Hailati, Zhengran Shen, Yanyu Ma, Nana Xue
Journal of Arid Land.2025; 17(10): 1458. CrossRef - Ageing process characterization of innovative substrates in vertical-flow constructed wetlands after treating greywater
Fernanda Cristina Muniz Sacco, Silvia Venditti, Paul Wilmes, Heidrun Steinmetz, Joachim Hansen
Journal of Environmental Management.2025; 394: 127602. CrossRef - Elevation controls bacterial branched GDGT-based temperature proxies: A regional to global perspective
Biswajit Roy, Rasmus Thiede, Sibin Simon, Anurag Kumar, Saisiddhant Moharana, Saptarshi Dey, Felix J. Elling
Global and Planetary Change.2025; 255: 105101. CrossRef - Regulating facility soil microbial community and reducing cadmium enrichment in lettuce by reductive soil disinfestation
Kaining Sun, Shu Zhang, Junfeng Wang
Frontiers in Environmental Science.2024;[Epub] CrossRef - Growth Disturbance, Mineral Nutrient Imbalance, Specific Symptoms and Leaf Characteristics Changes in Two Pomegranate Cultivars Induced by Deficiencies and Excess of Ca, Mg, Zn and Fe
Azhar Ouni, Samia Abboud, Darine Tlili, Sahar Ben Abdelwaheb, Mourad Jellali, Wafaa Bousetta, Messaoud Mars, Soumaya Dbara
Journal of Soil Science and Plant Nutrition.2024; 24(4): 8291. CrossRef - Intermediate irrigation with low fertilization promotes soil nutrient cycling and reduces CO2 and CH4 emissions via regulating fungal communities in arid agroecosystems
Wancai Wang, Zhencheng Ye, Jing Li, Guobin Liu, Qixiao Wu, Zhaoyang Wang, Guoqin He, Wende Yan, Chao Zhang
Journal of Environmental Management.2024; 351: 119688. CrossRef - Alpine wetlands degradation leads to soil nutrient imbalances that affect plant growth and microbial diversity
Ganjun Xu, Xiaoming Kang, Fei Wang, Weirong Zhuang, Wende Yan, Kerou Zhang
Communications Earth & Environment.2024;[Epub] CrossRef - Continuous cropping obstacles of medicinal plants: Focus on the plant-soil-microbe interaction system in the rhizosphere
Jiameng Liao, Pengguo Xia
Scientia Horticulturae.2024; 328: 112927. CrossRef - Agricultural ecosystems rather than fertilization strategies drives structure and composition of the ureolytic microbial functional guilds
Na Lv, Ping Gong, Hao Sun, Xiangxin Sun, Zhiguang Liu, Xueshi Xie, Yan Xue, Yuchao Song, Kaikuo Wu, Tingting Wang, Zhijie Wu, Lili Zhang
Journal of Environmental Management.2024; 372: 123148. CrossRef - Effects of reductive soil disinfestation combined with different types of organic materials on the microbial community and functions
Yu Zhan, Yi Zhou, Ergang Wang, Xinyue Miao, Tingting Zhou, Ning Yan, Changbao Chen, Qiong Li, Wenli Chen
Microbiology Spectrum.2024;[Epub] CrossRef - Monitoring of indicators and bacterial succession in organic-amended technosols for the restoration of semiarid ecosystems
Rocío Soria, Raúl Ortega, Nicolás Valiente, Natalia Rodríguez-Berbel, Manuel Esteban Lucas-Borja, Isabel Miralles
Science of The Total Environment.2024; 954: 176302. CrossRef - Contrasting responses of α- and β-multifunctionality to aboveground plant community in the Qinghai-Tibet Plateau
Xia Zhao, Hanwen Cui, Hongxian Song, Jingwei Chen, Jiajia Wang, Ziyang Liu, Izhar Ali, Zi Yang, Xiao Hou, Xianhui Zhou, Sa Xiao, Shuyan Chen
Science of The Total Environment.2024; 917: 170464. CrossRef - Vermicompost Supply Enhances Fragrant-Rice Yield by Improving Soil Fertility and Eukaryotic Microbial Community Composition under Environmental Stress Conditions
Anas Iqbal, Quaid Hussain, Zhaowen Mo, Tian Hua, Abd El-Zaher M. A. Mustafa, Xiangru Tang
Microorganisms.2024; 12(6): 1252. CrossRef - Substation of vermicompost mitigates Cd toxicity, improves rice yields and restores bacterial community in a Cd-contaminated soil in Southern China
Anas Iqbal, Jiang Ligeng, Zhaowen Mo, Muhammad Adnan, Rattan Lal, Maid Zaman, Sayed Usman, Tian Hua, Muhammad Imran, Sheng-Gang Pan, Jian-Ying Qi, Meiyang Duan, Qichang Gu, Xiangru Tang
Journal of Hazardous Materials.2024; 465: 133118. CrossRef - Assembly of root-associated bacterial community and soil health in cadmium-contaminated soil affected by nano/bulk-biochar compost associations
Qizhen Liu, Zhiqin Chen, Dan He, Ancao Pan, Jie yuan, Yaru Liu, Lukuan Huang, Ying Feng
Environmental Pollution.2024; 360: 124619. CrossRef - Unravelling the influence of microplastics with/without additives on radish (Raphanus sativus) and microbiota in two agricultural soils differing in pH
Jun Meng, Chengmei Diao, Zhonghua Cui, Zhangtao Li, Jiayi Zhao, Haibo Zhang, Minjun Hu, Jun Xu, Yugen Jiang, Ghulam Haider, Dong Yang, Shengdao Shan, Huaihai Chen
Journal of Hazardous Materials.2024; 478: 135535. CrossRef - Unveiling soil bacterial ecosystems in andean citrus orchards of Santander, Colombia
Genis Andrés Castillo-Villamizar, Valentina Tapia-Perdomo, Julieth Maldonado-Pava, Pedro Santamaría-Gálvis, Lizbeth Sayavedra, Jorge Hernandez-Torres, Edinson Puentes-Cala
Frontiers in Ecology and Evolution.2024;[Epub] CrossRef - Analysis of microbial communities in wheat, alfalfa, and oat crops after Tilletia laevis Kühn infection
Yuyang Shen, Chen Delai, Taiguo Liu, Wanquan Chen, Guangkuo Li, Haifeng Gao, Li Gao
Frontiers in Microbiology.2024;[Epub] CrossRef - Uptake and translocation of fungicide picarbutrazox in greenhouse cabbage: the significance of translocation factors and home processing
Ye-Jin Heo, Se-Yeon Kwak, Aniruddha Sarker, Sang-Hyeob Lee, Jae-Won Choi, Ji-Eun Oh, Lawal Abdulkareem, Jang-Eok Kim
Environmental Science and Pollution Research.2023; 30(14): 40919. CrossRef - Limitations of biofertilizers and their revitalization through nanotechnology
Pradeep Kumar Rai, Anuradha Rai, Naveen Kumar Sharma, Tarunendu Singh, Yogendra Kumar
Journal of Cleaner Production.2023; 418: 138194. CrossRef - New interactive functional indicator approach for river health assessment in an Asian temperate river: Comprehensive analysis of water chemistry, physical habitat, land use, and the biological disturbance of invasive alien species
Namsrai Jargal, Jeong-Eun Kim, Kwang-Guk An
Ecological Indicators.2023; 157: 111212. CrossRef - Response of the Soil Fungal Community and Its Function during the Conversion of Forestland to Tea Plantations: A Case Study in Southeast China
Feng Wang, Yuzhen Chen, Xiaomin Yu, Wenquan Yu, Zhiming You, Zhenbiao Yang
Forests.2023; 14(2): 209. CrossRef - Differences in bacterial community composition, structure and function between sediments in waterways and non-navigable channels in a plain river network area
Yixin Ma, Zulin Hua, Peng Wang, Liang Yu, Ying Lu, Yifan Wang, Yueyang Dong
Environmental Science and Pollution Research.2023; 30(16): 45910. CrossRef - Depth-Dependent Distribution of Prokaryotes in Sediments of the Manganese Crust on Nazimov Guyots of the Magellan Seamounts
Jianxing Sun, Hongbo Zhou, Haina Cheng, Zhu Chen, Jichao Yang, Yuguang Wang, Chunlei Jing
Microbial Ecology.2023; 86(4): 3027. CrossRef - Predicting microbial responses to changes in soil physical and chemical properties under different land management
Sara Sadeghi, Billi Jean Petermann, Joshua J. Steffan, Eric C. Brevik, Csongor Gedeon
Applied Soil Ecology.2023; 188: 104878. CrossRef - Bacterial and archaeal communities in saline soils from a Los Negritos geothermal area in Mexico
Joseph GUEVARA-LUNA, Mario HERNÁNDEZ-GUZMÁN, Nina MONTOYA-CIRIACO, Luc DENDOOVEN, Marina Olivia FRANCO-HERNÁNDEZ, Paulina ESTRADA-DE LOS SANTOS, María Soledad VÁSQUEZ-MURRIETA
Pedosphere.2023; 33(2): 312. CrossRef - Heavy Metal Distribution and Microbial Diversity of the Surrounding Soil and Tailings of Two Cu Mines in China
Yu Xia, Jing Liu, Jie Chang, Weijia Li, Kaiyu Xia, Zilong Liu, Yizhen Liu, Xuwen He
Water, Air, & Soil Pollution.2023;[Epub] CrossRef - Phosphorus addition modifies the bacterial community structure in rhizosphere of Achnatherum inebrians by influencing the soil properties and modulates the Epichloë gansuensis-mediated root exudate profiles
Chao Wang, Jianfeng Wang, Xueli Niu, Yang Yang, Kamran Malik, Jie Jin, Chengzhou Zhao, Rong Tang, Rong Zheng, Rong Huang
Plant and Soil.2023; 491(1-2): 543. CrossRef - Effects of 13C isotope-labeled allelochemicals on the growth of the invasive plant Alternanthera philoxeroides
Zexun Hua, Qingsong Xie, Yue Li, Mengying He, Yan Wang, Hongmiao Wu, Zhen Zhang
Scientific Reports.2023;[Epub] CrossRef - Development of rapid and precise approach for quantification of bacterial taxa correlated with soil health
Taghreed Khaled Abdelmoneim, Mahmoud S. M. Mohamed, Ismail Abdelshafy Abdelhamid, Sara Fareed Mohamed Wahdan, Mohamed A. M. Atia
Frontiers in Microbiology.2023;[Epub] CrossRef - Plant ash prevents acid mine drainage from sulfur-bearing tailings through multiple actions — A low-cost alkaline material
Jun Zeng, Jinrong Qiu, Jun Zhang, Yuqi Qi, Rentao Liu, Chuanqi Jian, Na Liu, Yaoming Su
Applied Geochemistry.2023; 155: 105702. CrossRef - Natural restoration alters soil microbial community structure, but has contrasting effects on the diversity of bacterial and fungal assemblages in salinized grasslands
Weina Wang, Huanjun Liu, Lifei Chen, Kadri Koorem, Yingchao Hu, Liang-Jun Hu
Science of The Total Environment.2023; 891: 164726. CrossRef - Spatial controls of methane uptake in upland soils across climatic and geological regions in Greenland
Ludovica D’Imperio, Bing-Bing Li, James M. Tiedje, Youmi Oh, Jesper Riis Christiansen, Sebastian Kepfer-Rojas, Andreas Westergaard-Nielsen, Kristian Koefoed Brandt, Peter E. Holm, Peiyan Wang, Per Ambus, Bo Elberling
Communications Earth & Environment.2023;[Epub] CrossRef - Comparative Analysis of Microbial Community Characteristic of Acidic and Neutral Soils in Korean Orchards
Do-Hyun Kim, Ji Yong Moon, Soo Young Hong, Hyeonmo Ahn, Yeo Wook Yoon, Hyo Jin Kim, So Youn Lee, Ji Won Kim, Eun-heui Han, Sang Yoon Kim, Eunjin Lee, Hang-Yeon Weon, Ho-Jong Ju
Korean Journal of Soil Science and Fertilizer.2023; 56(4): 449. CrossRef - Application of bovine bone meal and oyster shell meal to heavy metals polluted soil: Vegetable safety and bacterial community
Xiongkai Zheng, Bowen Zhang, Weibin Lai, Mengting Wang, Xueqin Tao, Mengyao Zou, Jiangmin Zhou, Guining Lu
Chemosphere.2023; 313: 137501. CrossRef - Soil Bacterial Community Structure and Physicochemical Influencing Factors of Artificial Haloxylon ammodendron Forest in the Sand Blocking and Fixing Belt of Minqin, China
Anlin Wang, Rui Ma, Yanjun Ma, Danni Niu, Teng Liu, Yongsheng Tian, Zhenghu Dong, Qiaodi Chai
Forests.2023; 14(11): 2244. CrossRef - Relationships between Rhizosphere Environments and Growth of 10-Year-Old Wild-Simulated Ginseng
Yeong-Bae Yun, Kiyoon Kim, Jeong-Hoon Huh, Yurry Um
Agronomy.2023; 13(5): 1313. CrossRef - Effect comparisons of different conditioners and microbial agents on the degradation of estrogens during dairy manure composting
Yan Li, Dong Zeng, Xiao-Lu Jiang, De-Chun He, Jia-Wu Hu, Zi-Wei Liang, Jia-Cheng Wang, Wang-Rong Liu
Chemosphere.2023; 345: 140312. CrossRef - Effects of continuous cropping Jiashi muskmelon on rhizosphere microbial community
Jilian Wang, Mingyuan Li, Qian Zhou, Tian Zhang
Frontiers in Microbiology.2023;[Epub] CrossRef - Does biochar addition improve soil physicochemical properties, bacterial community and alfalfa growth for saline soils?
Yang Chen, Yuan Qiu, Xinmei Hao, Ling Tong, Sien Li, Shaozhong Kang
Land Degradation & Development.2023; 34(11): 3314. CrossRef - The Response of Soil Bacterial Communities to Cropping Systems in Saline–Alkaline Soil in the Songnen Plain
Xiaoqian Liu, Junnan Ding, Jingyang Li, Dan Zhu, Bin Li, Bohan Yan, Lina Mao, Guangyu Sun, Lei Sun, Xin Li
Agronomy.2023; 13(12): 2984. CrossRef - Evaluation of a subtropical maize-rice rotation system maintained under long-term fertilizer inputs for sustainable intensification of agriculture
Asif Hameed, Yu-Pei Chen, Fo-Ting Shen, Shih-Yao Lin, Hsin-I Huang, Yu-Wen Lin, Chiu-Chung Young
Applied Soil Ecology.2023; 184: 104772. CrossRef - Metagenomic analysis displays the potential predictive biodegradation pathways of the persistent pesticides in agricultural soil with a long record of pesticide usage
Muneer Ahmad Malla, Anamika Dubey, Ashwani Kumar, Shweta Yadav
Microbiological Research.2022; 261: 127081. CrossRef - Soil microbial community responses to the application of a combined amendment in a historical zinc smelting area
Chuanjiang Tan, Youfa Luo, Tianling Fu
Environmental Science and Pollution Research.2022; 29(9): 13056. CrossRef - Elevated CO2 affects the rhizosphere microbial community and the growth of two invader plant species differently in semiarid Mediterranean soils
Fuensanta Caravaca, Pilar Torres, Gisela Díaz, Antonio Roldán
Land Degradation & Development.2022; 33(1): 117. CrossRef - Selective Enrichment Method for Isolation of Efficient Phosphate Solubilizing Bacteria from Soil
Patel HK, Vyas RV, Shelat HN
Communications in Soil Science and Plant Analysis.2022; 53(12): 1532. CrossRef - Impact of hexachlorocyclohexane addition on the composition and potential functions of the bacterial community in red and purple paddy soil
Jian Wang, Kaidi Tang, Xiaojie Hu, Hefei Wang, Fredrick Owino Gudda, Emmanuel Stephen Odinga, Hassan El-Ramady, Wanting Ling
Environmental Pollution.2022; 297: 118795. CrossRef - Remediation of Cd-, Pb-, Cu-, and Zn-contaminated soil using cow bone meal and oyster shell meal
Xiongkai Zheng, Mengyao Zou, Bowen Zhang, Weibin Lai, Xianming Zeng, Siyuan Chen, Mengting Wang, Xiaoyun Yi, Xueqin Tao, Guining Lu
Ecotoxicology and Environmental Safety.2022; 229: 113073. CrossRef - The spatio-chronological distribution of Achnatherum splendens influences soil bacterial communities in degraded grasslands
Chao Yang, Kangjia Li, Jipeng Sun, Weiyi Ye, Hao Lin, Yuze Yang, Yiran Zhao, Guofeng Yang, Zengyu Wang, Guihe Liu, Guomin Yu, Juan Sun
CATENA.2022; 209: 105828. CrossRef - Metagenomic analysis of bacterial communities of Wadi Namar Lake, Riyadh, Saudi Arabia
Modhi O. Alotaibi, Afrah E. Mohammed, Kamal H. Eltom
Saudi Journal of Biological Sciences.2022; 29(5): 3749. CrossRef - In situ restoration of soil ecological function in a coal gangue reclamation area after 10 years of elm/poplar phytoremediation
Dong-sheng Bai, Xu Yang, Jin-long Lai, Yi-wang Wang, Yu Zhang, Xue-gang Luo
Journal of Environmental Management.2022; 305: 114400. CrossRef - Antibiotic resistance genes alternation in soils modified with neutral and alkaline salts: interplay of salinity stress and response strategies of microbes
Yi Xu, Guoxiang You, Mairan Zhang, Dengyun Peng, Zewei Jiang, Suting Qi, Shihong Yang, Jun Hou
Science of The Total Environment.2022; 809: 152246. CrossRef - Hiệu quả của phân hữu cơ phối trộn tươi từ bèo hoa dâu (Azolla carolinian) và các vật liệu hữu cơ khác lên sinh trưởng và năng suất lúa trên nền đất nhiễm mặn ở điều kiện nhà lưới
Cao Thơ Nguyễn, Võ Hải Đường Trần, Khởi Nghĩa Nguyễn
Can Tho University Journal of Science.2022; 58(4): 143. CrossRef - Distribution of Burkholderia pseudomallei within a 300-cm deep soil profile: implications for environmental sampling
Khemngeun Pongmala, Alain Pierret, Priscia Oliva, Anne Pando, Viengmon Davong, Sayaphet Rattanavong, Norbert Silvera, Manophab Luangraj, Laurie Boithias, Khampaseuth Xayyathip, Ludovic Menjot, Melina Macouin, Emma Rochelle-Newall, Henri Robain, Amphone Vo
Scientific Reports.2022;[Epub] CrossRef - Influence of Rosaceous Species and Driving Factors on Differentiation of Rhizospheric Bacteria in a Deciduous Broad-Leaved Forest
Yukun Wang, Yuran He, Mao Ding, Zhi Wang, Shoubiao Zhou
Current Microbiology.2022;[Epub] CrossRef - The Deterioration of Agronomical Traits of the Continuous Cropping of Stevia Is Associated With the Dynamics of Soil Bacterial Community
Xinjuan Xu, Qingyun Luo, Qichao Wei, Shangtao Jiang, Caixia Dong, Mohammad Omar Faruque, Zhongwen Huang, Zhenghua Xu, Changxi Yin, Zaibiao Zhu, Xuebo Hu
Frontiers in Microbiology.2022;[Epub] CrossRef - Cu and Zn exert a greater influence on antibiotic resistance and its transfer than doxycycline in agricultural soils
Na Li, Jianguo Chen, Chong Liu, Jiaxun Yang, Changxiong Zhu, Hongna Li
Journal of Hazardous Materials.2022; 423: 127042. CrossRef - Assessment of Fertilizer Quality in Horse Waste-Based Bokashi Fertilizer Formulations
Auwalu Garba Gashua, Zulkefly Sulaiman, Martini Mohammad Yusoff, Mohd Yusoff Abd Samad, Mohd Fauzi Ramlan, Monsuru Adekunle Salisu
Agronomy.2022; 12(4): 937. CrossRef - Effects of earthworms and arbuscular mycorrhizal fungi on improvement of fertility and microbial communities of soils heavily polluted by cadmium
Gen Wang, Li Wang, Fang Ma
Chemosphere.2022; 286: 131567. CrossRef - Bacterial Community with Plant Growth-Promoting Potential Associated to Pioneer Plants from an Active Mexican Volcanic Complex
Clara Ivette Rincón-Molina, Esperanza Martínez-Romero, José Luis Aguirre-Noyola, Luis Alberto Manzano-Gómez, Adalberto Zenteno-Rojas, Marco Antonio Rogel, Francisco Alexander Rincón-Molina, Víctor Manuel Ruíz-Valdiviezo, Reiner Rincón-Rosales
Microorganisms.2022; 10(8): 1568. CrossRef - Influences of land reclamation on soil bacterial communities of abandoned salt pans in the Yellow River Delta
Yihao Zhu, Xiliang Song, Xiaoli Liu, Weifeng Chen, Xuchang Niu, Weizhi Zhou
Land Degradation & Development.2022; 33(16): 3231. CrossRef - Physico-Chemical and microbiological analysis of the loopspruit river, north west province: A metagenomic approach
Lohan Bredenhann, Daniel La Grange, Carlos Bezuidenhout, Lesego Molale-Tom
Water Supply.2022;[Epub] CrossRef - Long-Term Effect of Alkali and Partially Neutralized Irrigation Water on Soil Quality
Awtar Singh, Arvind Kumar, Rajender Kumar Yadav, Paramjit Singh Minhas, Upasana Saini
Journal of Soil Science and Plant Nutrition.2022; 22(2): 1252. CrossRef - Impacts of disinfected wastewater irrigation on soil characteristics, microbial community composition, and crop yield
Lays Paulino Leonel, Ariane Bize, Mahendra Mariadassou, Cédric Midoux, Jerusa Schneider, Adriano Luiz Tonetti
Blue-Green Systems.2022; 4(2): 247. CrossRef - Reduced Chemical Fertilizer Combined With Bio-Organic Fertilizer Affects the Soil Microbial Community and Yield and Quality of Lettuce
Ning Jin, Li Jin, Shuya Wang, Jinwu Li, Fanhong Liu, Zeci Liu, Shilie Luo, Yue Wu, Jian Lyu, Jihua Yu
Frontiers in Microbiology.2022;[Epub] CrossRef - Optimization of carriers and packaging for effective biofertilizers to enhance Oryza sativa L. growth in paddy soil
Jakkapan Sakpirom, Tomorn Nunkaew, Eakalak Khan, Duangporn Kantachote
Rhizosphere.2021; 19: 100383. CrossRef - Improved immobilization of soil cadmium by regulating soil characteristics and microbial community through reductive soil disinfestation
Xin Li, Xuefeng Li, Yueyue Li, Xiongze Dai, Qingzhuang Zhang, Mi Zhang, Zhuqing Zhang, Yu Tao, Wenchao Chen, Mingxing Zhang, Xiangyu Zhou, Sha Yang, Yanqing Ma, Mostafa Zhran, Xuexiao Zou
Science of The Total Environment.2021; 778: 146222. CrossRef - Soil bacterial community functions and distribution after mining disturbance
Enzong Xiao, Zengping Ning, Tangfu Xiao, Weimin Sun, Shiming Jiang
Soil Biology and Biochemistry.2021; 157: 108232. CrossRef - Pilot Study of Eco-Physiological Pepper Responses to Starfish-Based Organic Soil Amendments in Open-Field and Greenhouse Cultivations
Hyun-Sug Choi
Horticulturae.2021; 7(10): 344. CrossRef - Effects of the Denitrification Inhibitor “Procyanidins” on the Diversity, Interactions, and Potential Functions of Rhizosphere-Associated Microbiome
Mylène Hugoni, William Galland, Solène Lecomte, Maxime Bruto, Mohamed Barakat, Florence Piola, Wafa Achouak, Feth el Zahar Haichar
Microorganisms.2021; 9(7): 1406. CrossRef - Prospective usage of magnesium potassium phosphate cement combined with Bougainvillea alba derived biochar to reduce Pb bioavailability in soil and its uptake by Spinacia oleracea L
Iqbal Naeem, Nasir Masood, Veysel Turan, Muhammad Iqbal
Ecotoxicology and Environmental Safety.2021; 208: 111723. CrossRef - Impacto ambiental del vertimiento de aguas servidas en aglomerados urbanos ilegales del municipio de Villavicencio, Colombia
Fabián Dario Cuadros Segura, Alvaro Javier Moyano Salcedo, Adrian Mateo Pabon Laverde, Jassbleydi Valentina Trujillo Arias
Tecnura.2021; 25(68): 43. CrossRef - Efficacy of chitosan-coated textile waste biochar applied to Cd-polluted soil for reducing Cd mobility in soil and its distribution in moringa (Moringa oleifera L.)
Muhammad Zubair, Pia Muhammad Adnan Ramzani, Bilal Rasool, Muhammad Asaf Khan, Mahmood ur-Rahman, Imran Akhtar, Veysel Turan, Hafiz Muhammad Tauqeer, Muniba Farhad, Shahbaz Ali Khan, Javed Iqbal, Muhammad Iqbal
Journal of Environmental Management.2021; 284: 112047. CrossRef - The effects of vermicompost and shell powder addition on Cd bioavailability, enzyme activity and bacterial community in Cd-contaminated soil: A field study
Feng Wang, Weiwen Zhang, Lijuan Miao, Tianwei Ji, Yifan Wang, Hangjun Zhang, Ying Ding, Weiqin Zhu
Ecotoxicology and Environmental Safety.2021; 215: 112163. CrossRef - Diversity, structure, and composition of plant growth-promoting bacteria in soil from Brazilian Cerrado
Jailson do Nascimento Silva, Lucas William Mendes, Jadson Emanuel Lopes Antunes, Vania Maria Maciel Melo, Francisca Andrea da Silva Oliveira, Angela Celis de Almeida Lopes, Veronica Brito da Silva, Arthur Prudêncio de Araujo Pereira, Sergio Emilio Santos
Rhizosphere.2021; 20: 100435. CrossRef - Bioaccumulation of heavy metals in Stachys inflata and Scariola orientalis affected by particulate matters of a cement factory in central Iran
Hossein Moradi, Mohammad Abbasi, Mohsen Soleimani
Environmental Science and Pollution Research.2021; 28(32): 44098. CrossRef - Changes in rhizosphere microbial diversity and composition due to NaCl addition to the soil modify the outcome of maize-weed interactions
Larissa Cassemiro Pacheco Monteiro, Christiano da Conceição de Matos, Amarilson de Oliveira Cândido, Tiago Antônio de Oliveira Mendes, Mateus Ferreira Santana, Maurício Dutra Costa
Applied Soil Ecology.2021; 159: 103818. CrossRef - Different Responses of Soil Environmental Factors, Soil Bacterial Community, and Root Performance to Reductive Soil Disinfestation and Soil Fumigant Chloropicrin
Yu Zhan, Ning Yan, Xinyue Miao, Qiong Li, Changbao Chen
Frontiers in Microbiology.2021;[Epub] CrossRef - Farmer Friendly Options for Sterilizing Farm Tools for the Control of Xanthomonas Wilt Disease of Banana
Walter Ocimati, Anthony Fredrick Tazuba, Guy Blomme
Frontiers in Agronomy.2021;[Epub] CrossRef - Green Fluorescent Protein-Tagged Bacillus axarquiensis TUBP1 Reduced Cotton Verticillium Wilt Incidence by Altering Soil Rhizosphere Microbial Communities
Chang Gao, Bo Wang, Guo-cai Ma, Hong Zeng
Current Microbiology.2021; 78(9): 3562. CrossRef - Effect of Bacillus mesonae H20-5 Treatment on Rhizospheric Bacterial Community of Tomato Plants under Salinity Stress
Shin Ae Lee, Hyeon Su Kim, Mee Kyung Sang, Jaekyeong Song, Hang-Yeon Weon
The Plant Pathology Journal.2021; 37(6): 662. CrossRef - Study on the Rhizosphere Soil Microbial Community Structure Associated with Five Land Use Types in Jinchuan Mining Area
Tian-Peng Gao, Jing-Wen Fu, Ming-Bo Zuo, Yu-Bing Liu, Dang-Hui Xu, Guo-Hua Chang, Xi-Sheng Tai, Bing Yue, Zhuo-Xin Yin, Qing Zhang, R. Weerasinghe, C. Fang
E3S Web of Conferences.2021; 237: 01010. CrossRef - Chemical fertilizer reduction with organic fertilizer effectively improve soil fertility and microbial community from newly cultivated land in the Loess Plateau of China
Jianqiao Han, Yunyun Dong, Man Zhang
Applied Soil Ecology.2021; 165: 103966. CrossRef - Rhizosphere Microbiome Regulates the Growth of Mustard under Organic Greenhouse Cultivation
Ting-Chung Liu, Hui-Mei Peng, Seth Wollney, Chang-Hui Shen
Agriculture.2021; 11(10): 987. CrossRef - Culture-dependent and culture-independent characterization of bacterial community diversity in different types of sandy lands: the case of Minqin County, China
Yali Wei, Fang Wang, Jiangli Gao, Yaolong Huang, Wei Ren, Hongmei Sheng
BMC Microbiology.2021;[Epub] CrossRef - Application of wood ash leads to strong vertical gradients in soil pH changing prokaryotic community structure in forest top soil
Toke Bang-Andreasen, Mette Peltre, Lea Ellegaard-Jensen, Lars Hestbjerg Hansen, Morten Ingerslev, Regin Rønn, Carsten Suhr Jacobsen, Rasmus Kjøller
Scientific Reports.2021;[Epub] CrossRef - Effects of an additive (hydroxyapatite–bentonite–biochar) on Cd and Pb stabilization and microbial community composition in contaminated vegetable soil
Di Zhang, Ting Li, Aifang Ding, Xiaoxia Wu
RSC Advances.2021; 11(20): 12200. CrossRef - The effect of Soil properties on the Biological Diversity of Fungi in Soil University of Anbar.
Wijdan Ahmed Ali, Rahaf Haineed Hussein, Wafaa Tali Radef
Journal of Physics: Conference Series.2021; 2114(1): 012068. CrossRef - Effects of continuous cropping of Pinellia ternata (Thunb.) Breit. on soil physicochemical properties, enzyme activities, microbial communities and functional genes
Yuan Zhao, Xiao–Meng Qin, Xue–Ping Tian, Tao Yang, Rong Deng, Jun Huang
Chemical and Biological Technologies in Agriculture.2021;[Epub] CrossRef - Effects of microbial bio-fertilizers on soil physicochemical properties under different soil water regimes in greenhouse grown eggplant (Solanum Melongena L.)
Zeynep Demir
Communications in Soil Science and Plant Analysis.2020; 51(14): 1888. CrossRef - Rare rather than abundant microbial communities drive the effects of long-term greenhouse cultivation on ecosystem functions in subtropical agricultural soils
Mengdi Xue, Zhiying Guo, Xinyun Gu, Hailun Gao, Shimei Weng, Jing Zhou, Daguo Gu, Huixiang Lu, Xiaoqi Zhou
Science of The Total Environment.2020; 706: 136004. CrossRef - Electrophysical and geoinformational methods of mapping the biological properties of peats
Antonina D. Pozdnyakova, Lev A. Pozdnyakov
Dokuchaev Soil Bulletin.2020; (103): 149. CrossRef - Chitosan with Bentonite and Biochar in Ni-Affected Soil Reduces Grain Ni Concentrations, Improves Soil Enzymes and Grain Quality in Lentil
Hafiz Syed Tanzeem-ul-Haq, Bilal Rasool, Syed Ehtisham-ul-Haque, Sadia Saif, Sadia Zafar, Tahira Younis, Imran Akhtar, Laila Jafri, Naeem Iqbal, Nasir Masood, Karolina Lewińska, Muhammad Iqbal
Minerals.2020; 11(1): 11. CrossRef - Structural and functional responses of bacterial and fungal communities to multiple heavy metal exposure in arid loess
Xiao-Ying Zeng, Shi-Weng Li, Yan Leng, Xiao-Hu Kang
Science of The Total Environment.2020; 723: 138081. CrossRef - Role of biochar and organic substrates in enhancing the functional characteristics and microbial community in a saline soil
M.R.K. Manasa, Naveen Reddy Katukuri, Sree Sankar Darveekaran Nair, Yang Haojie, Zhiman Yang, Rong bo Guo
Journal of Environmental Management.2020; 269: 110737. CrossRef - Differences of the microbial community structures and predicted metabolic potentials in the lake, river, and wetland sediments in Dongping Lake Basin
Jiaohui Fang, Ruirui Yang, Qingqing Cao, Junyu Dong, Changchao Li, Quan Quan, Miansong Huang, Jian Liu
Environmental Science and Pollution Research.2020; 27(16): 19661. CrossRef - Utilization of marigold (Tagetes erecta) flower fermentation wastewater as a fertilizer and its effect on microbial community structure in maize rhizosphere and non-rhizosphere soil
Hongwei Liu, Yana Wang, Cong Liang, Qingxia Yang, Shuai Wang, Buqing Wang, Feiyan Zhang, Liping Zhang, Huicai Cheng, Shuishan Song, Liping Zhang
Biotechnology & Biotechnological Equipment.2020; 34(1): 522. CrossRef - Responses of a semi-natural grassland community of tropical region to elevated ozone: An assessment of soil dynamics and biomass accumulation
Tsetan Dolker, Arideep Mukherjee, Shashi Bhushan Agrawal, Madhoolika Agrawal
Science of The Total Environment.2020; 718: 137141. CrossRef - Analysis of bacterial and fungal communities in continuous-cropping ramie (Boehmeria nivea L. Gaud) fields in different areas in China
Yanzhou Wang, Xiaomin Xu, Touming Liu, Hongwu Wang, Yan Yang, Xiaorong Chen, Siyuan Zhu
Scientific Reports.2020;[Epub] CrossRef - Diversity of rhizosphere and endophytic fungi in Atractylodes macrocephala during continuous cropping
Bo Zhu, Jianjun Wu, Qingyong Ji, Wei Wu, Shihui Dong, Jiayan Yu, Qiaoyan Zhang, Luping Qin
PeerJ.2020; 8: e8905. CrossRef - The invader Carpobrotus edulis promotes a specific rhizosphere microbiome across globally distributed coastal ecosystems
G. Rodríguez-Caballero, F. Caravaca, G. Díaz, P. Torres, A. Roldán
Science of The Total Environment.2020; 719: 137347. CrossRef - Variation in the composition of the microbial community in the rhizosphere of potato plants depending on cropping season, cultivar type, and plant development stage
Rania AYDİ BEN ABDALLAH, Hayfa JABNOUN-KHİAREDDİNE, Mejda DAAMİ-REMADİ
International Journal of Agriculture Environment and Food Sciences.2020; 4(3): 319. CrossRef - Different types of agricultural land use drive distinct soil bacterial communities
Shin Ae Lee, Jeong Myeong Kim, Yiseul Kim, Jae-Ho Joa, Seong-Soo Kang, Jae-Hyung Ahn, Mincheol Kim, Jaekyeong Song, Hang-Yeon Weon
Scientific Reports.2020;[Epub] CrossRef - Total RNA sequencing reveals multilevel microbial community changes and functional responses to wood ash application in agricultural and forest soil
Toke Bang-Andreasen, Muhammad Zohaib Anwar, Anders Lanzén, Rasmus Kjøller, Regin Rønn, Flemming Ekelund, Carsten Suhr Jacobsen
FEMS Microbiology Ecology.2020;[Epub] CrossRef - Changes in soil microbial communities at Jinsha earthen site are associated with earthen site deterioration
Jing Li, Xiaoyue Zhang, Lin Xiao, Ke Liu, Yue Li, Ziwei Zhang, Qiang Chen, Xiaolin Ao, Decong Liao, Yunfu Gu, Menggen Ma, Xiumei Yu, Quanju Xiang, Ji Chen, Xiaoping Zhang, Tao Yang, Petri Penttinen, Ke Zhao
BMC Microbiology.2020;[Epub] CrossRef - Microbial Diversity of Some Sabkha and Desert Sites in Saudi Arabia
Modhi O. Alotaibi, Hana S. Sonbol, Suaad S. Alwakeel, Rasha S. Suliman, Ramy A. Fodah, Ahmad S. Abu Jaffal, Nouf I. AlOthman, Afrah E. Mohammed
Saudi Journal of Biological Sciences.2020; 27(10): 2778. CrossRef - Responses of the rhizosphere bacterial community in acidic crop soil to pH: Changes in diversity, composition, interaction, and function
Wenjie Wan, Jiadan Tan, Yi Wang, Yin Qin, Huangmei He, Huiqin Wu, Wenlong Zuo, Donglan He
Science of The Total Environment.2020; 700: 134418. CrossRef - Decrease in diversity and shift in composition of the soil bacterial community were closely related to high available phosphorus in agricultural Fluvisols of North China
Chenxu Liu, Xiaorong Zhao, Qimei Lin, Guitong Li
Acta Agriculturae Scandinavica, Section B — Soil & Plant Science.2019; 69(7): 618. CrossRef - Soil aggregates regulate the impact of soil bacterial and fungal communities on soil respiration
Chao Yang, Nan Liu, Yingjun Zhang
Geoderma.2019; 337: 444. CrossRef - Bacterial community variations in paddy soils induced by application of veterinary antibiotics in plant-soil systems
Misbah Uddin, Jingwen Chen, Xianliang Qiao, Run Tian, Yasir Arafat, Xiaojing Yang
Ecotoxicology and Environmental Safety.2019; 167: 44. CrossRef - Effects of recent fire on soil conditions and nutrient use of a native and an invasive grass in the Brazilian savanna
Erico Fernando Lopes Pereira-Silva, Elisa Hardt, Murilo Bellato Biral, Victor Camargo Keller, Welington Braz Carvalho Delitti
Écoscience.2019; 26(4): 359. CrossRef - Identification of Microbial Profiles in Heavy-Metal-Contaminated Soil from Full-Length 16S rRNA Reads Sequenced by a PacBio System
Moonsuk Hur, Soo-Je Park
Microorganisms.2019; 7(9): 357. CrossRef - Effects of Pretreatment Methods of Wheat Straw on Adsorption of Cd(II) from Waterlogged Paddy Soil
Mengjie Wu, Hongyu Liu, Chunping Yang
International Journal of Environmental Research and Public Health.2019; 16(2): 205. CrossRef - A preliminary examination of bacterial, archaeal, and fungal communities inhabiting different rhizocompartments of tomato plants under real-world environments
Shin Ae Lee, Yiseul Kim, Jeong Myeong Kim, Bora Chu, Jae-Ho Joa, Mee Kyung Sang, Jaekyeong Song, Hang-Yeon Weon
Scientific Reports.2019;[Epub] CrossRef - Soil Salinity and pH Drive Soil Bacterial Community Composition and Diversity Along a Lateritic Slope in the Avon River Critical Zone Observatory, Western Australia
Flora J. M. O’Brien, Maya Almaraz, Melissa A. Foster, Alice F. Hill, David P. Huber, Elizabeth K. King, Harry Langford, Mary-Anne Lowe, Bede S. Mickan, Valerie S. Miller, Oliver W. Moore, Falko Mathes, Deirdre Gleeson, Matthias Leopold
Frontiers in Microbiology.2019;[Epub] CrossRef - Effect of aridity and dune type on rhizosphere soil bacterial communities of Caragana microphylla in desert regions of northern China
Jiangli Gao, Yang Luo, Yali Wei, Yaolong Huang, Hua Zhang, Wenliang He, Hongmei Sheng, Lizhe An, Marie-Joelle Virolle
PLOS ONE.2019; 14(10): e0224195. CrossRef - Temporal variation of Q 10 values in response to changes in soil physiochemical properties caused by fairy rings
Chao Yang, Yingjun Zhang, Yuping Rong, Yixian Bei, Yuqi Wei, Nan Liu
European Journal of Soil Biology.2018; 86: 42. CrossRef - Soil productivity and structure of bacterial and fungal communities in unfertilized arable soil
Boxi Wang, Yoichi Adachi, Shuichi Sugiyama, Lorenzo Brusetti
PLOS ONE.2018; 13(9): e0204085. CrossRef - Effect of reclamation of abandoned salinized farmland on soil bacterial communities in arid northwest China
Zhibo Cheng, Yun Chen, Fenghua Zhang
Science of The Total Environment.2018; 630: 799. CrossRef - Composition and diversity of cyanobacteria-associated and free-living bacterial communities during cyanobacterial blooms
Leighannah N. Akins, Paul Ayayee, Laura G. Leff
Annals of Microbiology.2018; 68(8): 493. CrossRef - Modeling soil acidification in typical Chinese cropping systems
Qichao Zhu, Xuejun Liu, Tianxiang Hao, Mufan Zeng, Jianbo Shen, Fusuo Zhang, Wim De Vries
Science of The Total Environment.2018; 613-614: 1339. CrossRef - Macro and Microelements Drive Diversity and Composition of Prokaryotic and Fungal Communities in Hypersaline Sediments and Saline–Alkaline Soils
Kaihui Liu, Xiaowei Ding, Xiaofei Tang, Jianjun Wang, Wenjun Li, Qingyun Yan, Zhenghua Liu
Frontiers in Microbiology.2018;[Epub] CrossRef - Shift of soil bacterial community and decrease of metals bioavailability after immobilization of a multi-metal contaminated acidic soil by inorganic-organic mixed amendments: A field study
Li-min Huang, Guang-wei Yu, Fu-zhen Zou, Xin-xian Long, Qi-tang Wu
Applied Soil Ecology.2018; 130: 104. CrossRef - Wood Ash Induced pH Changes Strongly Affect Soil Bacterial Numbers and Community Composition
Toke Bang-Andreasen, Jeppe T. Nielsen, Jana Voriskova, Janine Heise, Regin Rønn, Rasmus Kjøller, Hans C. B. Hansen, Carsten S. Jacobsen
Frontiers in Microbiology.2017;[Epub] CrossRef - Comparisons of Soil Properties, Enzyme Activities and Microbial Communities in Heavy Metal Contaminated Bulk and Rhizosphere Soils of Robinia pseudoacacia L. in the Northern Foot of Qinling Mountain
Yurong Yang, Miao Dong, Yaping Cao, Jinlong Wang, Ming Tang, Yihui Ban
Forests.2017; 8(11): 430. CrossRef
- Comparative analysis of bacterial diversity in the rhizosphere of tomato by culture-dependent and -independent approaches
-
Shin Ae Lee , Jiyoung Park , Bora Chu , Jeong Myeong Kim , Jae-Ho Joa , Mee Kyung Sang , Jaekyeong Song , Hang-Yeon Weon
-
J. Microbiol. 2016;54(12):823-831. Published online November 26, 2016
-
DOI: https://doi.org/10.1007/s12275-016-6410-3
-
-
943
View
-
0
Download
-
45
Crossref
-
Abstract
PDF
-
The microbiome in the rhizosphere–the region surrounding
plant roots–plays a key role in plant growth and health,
enhancing nutrient availability and protecting plants from
biotic and abiotic stresses. To assess bacterial diversity in the
tomato rhizosphere, we performed two contrasting approaches:
culture-dependent and -independent. In the culturedependent
approach, two culture media (Reasoner’s 2A agar
and soil extract agar) were supplemented with 12 antibiotics
for isolating diverse bacteria from the tomato rhizosphere
by inhibiting predominant bacteria. A total of 689 bacterial
isolates were clustered into 164 operational taxonomic units
(OTUs) at 97% sequence similarity, and these were found to
belong to five bacterial phyla (Proteobacteria, Actinobacteria,
Bacteroidetes, Acidobacteria, and Firmicutes). Of these, 122
OTUs were retrieved from the antibiotic-containing media,
and 80 OTUs were recovered by one specific antibiotic-containing
medium. In the culture-independent approach, we
conducted Illumina MiSeq amplicon sequencing of the 16S
rRNA gene and obtained 19,215 high-quality sequences, which
clustered into 478 OTUs belonging to 16 phyla. Among the
total OTUs from the MiSeq dataset, 22% were recovered in
the culture collection, whereas 41% of OTUs in the culture
collection were not captured by MiSeq sequencing. These
results
showed that antibiotics were effective in isolating
various taxa that were not readily isolated on antibiotic-free
media, and that both contrasting approaches provided complementary
information to characterize bacterial diversity
in the tomato rhizosphere.
-
Citations
Citations to this article as recorded by - In situ similis culturomic strategies based on vegetable (veggie)-discs extend diversity of in vitro-cultivated microbiota of vegetables
Randa M. Abdel-Fatah, Nada A. Moner, Eman H. Nour, Tarek R. Elsayed, Mohamed T. Abbas, Mahmoud S. Abdelwahab, Mervat A. Hamza, Hanan H. Youssef, Ahmed S. Shehata, Omar M. Shahat, Mohamed Fayez, Silke Ruppel, Nabil A. Hegazi
Plant and Soil.2026; 523(2): 991. CrossRef - Rhizosphere Microbiome Responses to Root-Knot Nematode Infection in Fagopyrum tataricum: Diversity, Network Dynamics, and Potential Biocontrol Taxa
Chengpeng Li, Cuifeng Tang, Duanyong Zhou, Min Rao, Yanjun Zhang, Zhilong Wang, Xiaoyang Wu
Diversity.2026; 18(5): 240. CrossRef - Apocarotenoid application differentially shape leaf molecular composition and associated rhizosphere soil microbial communities in tomato plants
Pierpaolo Del Boccio, Chiara D'Errico, Fabiano Sillo, Vincenzo Montesano, Chiara Pagliarani, Stefano D'Alessandro, Raffaella Balestrini, Elisa Zampieri
Rhizosphere.2026; 38: 101325. CrossRef - Linking microbiome structure to functional analysis identifies resilient Pseudarthrobacter, Pseudomonas, and Streptomyces antagonists of Phytophthora infestans in tomato
Philemon Orwa, Theresa Kuhl-Nagel, Rosa Meinhold-Ernst, Johannes A. Jehle, Romano Mwirichia, Ada Linkies
Frontiers in Microbiology.2026;[Epub] CrossRef - Accessing rare bacterial biosphere of soil through culturing: A comparative study of culture media effectiveness integrated with metataxonomics
José A. Siles, Norman Terry
Applied Soil Ecology.2026; 226: 107301. CrossRef - Complementing culture-dependent and -independent approaches is essential when assessing bacterial community potential functions in chronically polycyclic aromatic hydrocarbon-contaminated soils
Sabrina FESTA, Esteban Emanuel NIETO, Penélope RAPOSEIRAS ALDORINO, Sara CUADROS-ORELLANA, José Matías IRAZOQUI, Claudio QUEVEDO, Bibiana Marina COPPOTELLI, Irma Susana MORELLI
Pedosphere.2025; 35(6): 931. CrossRef - Preliminary Studies on the Effect of Soil Conditioner (AMP) Application on the Chemical and Microbiological Properties of Soil under Winter Oilseed Rape Cultivation
Piotr Szulc, Marek Selwet, Tomasz Kaczmarek, Katarzyna Ambroży-Deręgowska, Małgorzata Neumann
Agronomy.2024; 14(10): 2308. CrossRef - Metagenomic evaluation of peanut rhizosphere microbiome from the farms of Saurashtra regions of Gujarat, India
Krunal R. Hirpara, Ankit T. Hinsu, Ramesh K. Kothari
Scientific Reports.2024;[Epub] CrossRef - Diversity and Functionality of Bacteria Associated with Different Tissues of Spider Heteropoda venatoria Revealed through Integration of High-Throughput Sequencing and Culturomics Approaches
Likun Zhao, Shanfeng Zhang, Ruoyi Xiao, Chao Zhang, Zhitang Lyu, Feng Zhang
Microbial Ecology.2024;[Epub] CrossRef - The Tomato's Tale: Exploring Taxonomy, Biogeography, Domestication, and Microbiome for Enhanced Resilience
Stalin Sarango Flores, Viviane Cordovez, Ben Oyserman, Nejc Stopnisek, Jos M. Raaijmakers, Pieter van ‘t Hof
Phytobiomes Journal.2024; 8(1): 5. CrossRef - Community assembly and potential function analysis of the endophyte in Eucommia ulmoides
Yunzhe Tang, Chunlian Tian, Di Yao, Shuai Yang, Linfang Shi, Langbo Yi, Qingzhong Peng
BMC Microbiology.2024;[Epub] CrossRef - Diversity and plant growth promoting ability of rice root-associated bacteria in Burkina-Faso and cross-comparison with metabarcoding data
Moussa Sondo, Issa Wonni, Kadidia Koïta, Isabelle Rimbault, Mariam Barro, Charlotte Tollenaere, Lionel Moulin, Agnieszka Klonowska, Kandasamy Ulaganathan
PLOS ONE.2023; 18(11): e0287084. CrossRef - Unraveling the functional genes present in rhizosphere microbiomes of Solanum lycopersicum
Afeez Adesina Adedayo, Ayomide Emmanuel Fadiji, Olubukola Oluranti Babalola
PeerJ.2023; 11: e15432. CrossRef - Structure and ecological function of the soil microbiome associated with ‘Sanghuang’ mushrooms suffering from fungal diseases
Weifang Xu, Tao Sun, Jiahui Du, Shuqing Jin, Ying Zhang, Guofa Bai, Wanyu Li, Dengke Yin
BMC Microbiology.2023;[Epub] CrossRef - Cultivation strategies for prokaryotes from extreme environments
Zi‐Wen Yang, Zheng‐Han Lian, Lan Liu, Bao‐Zhu Fang, Wen‐Jun Li, Jian‐Yu Jiao
iMeta.2023;[Epub] CrossRef - Insights into the Methodological, Biotic and Abiotic Factors Influencing the Characterization of Xylem-Inhabiting Microbial Communities of Olive Trees
Manuel Anguita-Maeso, Juan A. Navas-Cortés, Blanca B. Landa
Plants.2023; 12(4): 912. CrossRef - Coupling of metataxonomics and culturing improves bacterial diversity characterization and identifies a novel Rhizorhapis sp. with metal resistance potential in a multi-contaminated waste sediment
José A. Siles, Andrew J. Hendrickson, Norman Terry
Journal of Environmental Management.2022; 322: 116132. CrossRef - Microbial Genes of Agricultural Importance in Maize Rhizosphere Unveiled Through Shotgun Metagenomics
Oluwadara Pelumi Omotayo, Ozede Nicholas Igiehon, Olubukola Oluranti Babalola
Spanish Journal of Soil Science.2022;[Epub] CrossRef - Soil and Soilless Tomato Cultivation Promote Different Microbial Communities That Provide New Models for Future Crop Interventions
Alice Anzalone, Alexandros Mosca, Giulio Dimaria, Daniele Nicotra, Matilde Tessitori, Grete Francesca Privitera, Alfredo Pulvirenti, Cherubino Leonardi, Vittoria Catara
International Journal of Molecular Sciences.2022; 23(15): 8820. CrossRef - To culture or not to culture: a snapshot of culture-dependent and culture-independent bacterial diversity from peanut rhizosphere
Ankit Hinsu, Ashvin Dumadiya, Anjali Joshi, Rohitkumar Kotadiya, Kavan Andharia, Prakash Koringa, Ramesh Kothari
PeerJ.2021; 9: e12035. CrossRef - Exploring untapped potential of Streptomyces spp. in Gurbantunggut Desert by use of highly selective culture strategy
Shuai Li, Lei Dong, Wen-Hui Lian, Zhi-Liang Lin, Chun-Yan Lu, Lu Xu, Li Li, Wael N. Hozzein, Wen-Jun Li
Science of The Total Environment.2021; 790: 148235. CrossRef - Metagenomic Study of the Community Structure and Functional Potentials in Maize Rhizosphere Microbiome: Elucidation of Mechanisms behind the Improvement in Plants under Normal and Stress Conditions
Oluwadara Omotayo, Ozede Igiehon, Olubukola Babalola
Sustainability.2021; 13(14): 8079. CrossRef -
Cultivating the Bacterial Microbiota of
Populus
Roots
Dana L. Carper, David J. Weston, Aditya Barde, Collin M. Timm, Tse-Yuan Lu, Leah H. Burdick, Sara S. Jawdy, Dawn M. Klingeman, Michael S. Robeson, Allison M. Veach, Melissa A. Cregger, Udaya C. Kalluri, Christopher W. Schadt, Mircea Podar, Mitchel J. Dokt
mSystems.2021;[Epub] CrossRef - IDENTIFICATION OF ENDOPHYTIC BACTERIA OF SEEDS FROM Cedrela odorata L. (Meliaceae) WITH BIOTECHNOLOGICAL CHARACTERISTICS
Saúl Espinosa Zaragoza, Ricardo Sánchez Cruz, Diana Sanzón Gómez, Margarita C Escobar Sandoval, Gustavo Yañez Ocampo, Mario A Morales Constantino, Arnoldo Wong Villarreal
Acta Biológica Colombiana.2021; 26(2): 196. CrossRef - Manure-Based Amendments Influence Surface-Associated Bacteria and Markers of Antibiotic Resistance on Radishes Grown in Soils with Different Textures
Giselle K. P. Guron, Chaoqi Chen, Pang Du, Amy Pruden, Monica A. Ponder, Johanna Björkroth
Applied and Environmental Microbiology.2021;[Epub] CrossRef - Formation, characterization and modeling of emergent synthetic microbial communities
Jia Wang, Dana L. Carper, Leah H. Burdick, Him K. Shrestha, Manasa R. Appidi, Paul E. Abraham, Collin M. Timm, Robert L. Hettich, Dale A. Pelletier, Mitchel J. Doktycz
Computational and Structural Biotechnology Journal.2021; 19: 1917. CrossRef - Isolation of lindane- and endosulfan-degrading bacteria and dominance analysis in the microbial communities by culture-dependent and independent methods
Siang Chen Wu, Jian-Kai Gao, Bo-Sheng Chang
Microbiological Research.2021; 251: 126817. CrossRef - Nutrient concentrations affect the antimicrobial resistance profiles of cattle manures
Vijay Laxmi Shrivas, Anil Kumar Choudhary, Puttaswamy Hariprasad, Shilpi Sharma
Environmental Science and Pollution Research.2021; 30(10): 25141. CrossRef - Bioprospecting of Beneficial Bacteria Traits Associated With Tomato Root in Greenhouse Environment Reveals That Sampling Sites Impact More Than the Root Compartment
Alice Anzalone, Mario Di Guardo, Patrizia Bella, Farideh Ghadamgahi, Giulio Dimaria, Rosario Zago, Gabriella Cirvilleri, Vittoria Catara
Frontiers in Plant Science.2021;[Epub] CrossRef - Comparison of the diversity of cultured and total bacterial communities in marine sediment using culture-dependent and sequencing methods
Meng Wang, Samina Noor, Ran Huan, Congling Liu, JiaYi Li, Qingxin Shi, Yan-Jiao Zhang, Cuiling Wu, Hailun He
PeerJ.2020; 8: e10060. CrossRef - Phylogenetic farming: Can evolutionary history predict crop rotation via the soil microbiome?
Ian Kaplan, Nicholas A. Bokulich, J. Gregory Caporaso, Laramy S. Enders, Wadih Ghanem, Kathryn S. Ingerslew
Evolutionary Applications.2020; 13(8): 1984. CrossRef - Revealing the Variation and Stability of Bacterial Communities in Tomato Rhizosphere Microbiota
Zhiqiang Cheng, Shaonan Lei, Ye Li, Wei Huang, Rongqin Ma, Juan Xiong, Ting Zhang, Lingyue Jin, Hafeez ul Haq, Xiaohong Xu, Baoyu Tian
Microorganisms.2020; 8(2): 170. CrossRef - Diversity and plant growth-promoting functions of diazotrophic/N-scavenging bacteria isolated from the soils and rhizospheres of two species of Solanum
Mónica Yorlady Alzate Zuluaga, Karina Maria Lima Milani, Leandro Simões Azeredo Gonçalves, André Luiz Martinez de Oliveira, Luigimaria Borruso
PLOS ONE.2020; 15(1): e0227422. CrossRef - Testing the Two-Step Model of Plant Root Microbiome Acquisition Under Multiple Plant Species and Soil Sources
Hugo R. Barajas, Shamayim Martínez-Sánchez, Miguel F. Romero, Cristóbal Hernández Álvarez, Luis Servín-González, Mariana Peimbert, Rocío Cruz-Ortega, Felipe García-Oliva, Luis D. Alcaraz
Frontiers in Microbiology.2020;[Epub] CrossRef - Tailoring plant-associated microbial inoculants in agriculture: a roadmap for successful application
Maged M Saad, Abdul Aziz Eida, Heribert Hirt, Peter Doerner
Journal of Experimental Botany.2020; 71(13): 3878. CrossRef - Bacterial communities in the rhizosphere, phyllosphere and endosphere of tomato plants
Chun-Juan Dong, Ling-Ling Wang, Qian Li, Qing-Mao Shang, Marie-Joelle Virolle
PLOS ONE.2019; 14(11): e0223847. CrossRef - Microbiota and Antibiotic Resistome of Lettuce Leaves and Radishes Grown in Soils Receiving Manure-Based Amendments Derived From Antibiotic-Treated Cows
Kendall Fogler, Giselle K. P. Guron, Lauren L. Wind, Ishi M. Keenum, W. Cully Hession, Leigh-Anne Krometis, Laura K. Strawn, Amy Pruden, Monica A. Ponder
Frontiers in Sustainable Food Systems.2019;[Epub] CrossRef - Rhizosphere Bacteriobiome of the Husk Tomato Grown in the Open Field in West Siberia
Natalia B. Naumova, Oleg A. Savenkov, Tatiana Y. Alikina, Marsel R. Kabilov
Agriculture (Pol'nohospodárstvo).2019; 65(4): 147. CrossRef - Assessment of the non-lactic acid bacteria microbiota in fresh cucumbers and commercially fermented cucumber pickles brined with 6% NaCl
Ilenys M. Pérez-Díaz, Janet S. Hayes, Eduardo Medina, Ashlee M. Webber, Natasha Butz, Allison N. Dickey, Zhongjing Lu, Maria A. Azcarate-Peril
Food Microbiology.2019; 77: 10. CrossRef - Reductionist synthetic community approaches in root microbiome research
Yong-Xin Liu, Yuan Qin, Yang Bai
Current Opinion in Microbiology.2019; 49: 97. CrossRef - Effects of chitosan oligosaccharides on microbiota composition of silver carp (Hypophthalmichthys molitrix) determined by culture-dependent and independent methods during chilled storage
Shiliang Jia, Xiaochang Liu, Zhan Huang, Yan Li, Longteng Zhang, Yongkang Luo
International Journal of Food Microbiology.2018; 268: 81. CrossRef - Diversity of culturable methylotrophic bacteria in different genotypes of groundnut and their potential for plant growth promotion
R. Krishnamoorthy, Soon-Wo Kwon, K. Kumutha, M. Senthilkumar, S. Ahmed, Tongmin Sa, R. Anandham
3 Biotech.2018;[Epub] CrossRef - Roots and Panicles of the C4 Model Grasses Setaria viridis (L). and S. pumila Host Distinct Bacterial Assemblages With Core Taxa Conserved Across Host Genotypes and Sampling Sites
Carolina Escobar Rodríguez, Birgit Mitter, Livio Antonielli, Friederike Trognitz, Stéphane Compant, Angela Sessitsch
Frontiers in Microbiology.2018;[Epub] CrossRef - Interaction of plant growth promoting bacteria with tomato under abiotic stress: A review
Vipin Kumar Singh, Amit Kishore Singh, Prem Pratap Singh, Ajay Kumar
Agriculture, Ecosystems & Environment.2018; 267: 129. CrossRef -
Parapedobacter lycopersici sp. nov., isolated from the rhizosphere soil of tomato plants (Solanum lycopersicum L.)
Jeong Myeong Kim, Shin Ae Lee, Hayoung Cho, Soo-Jin Kim, Jae-Ho Joa, Soon-Wo Kwon, Hang-Yeon Weon
International Journal of Systematic and Evolutionary Microbiology
.2017; 67(10): 3728. CrossRef
- Siphonobacter intestinalis sp. nov., a bacterium isolated from the feces of Pseudorhynchus japonicus
-
Shin Ae Lee , Jeong Myeong Kim , Jae-Hyung Ahn , Jae-Ho Joa , Soo-Jin Kim , Mee-Kyung Sang , Jaekyeong Song , Soon-Wo Kwon , Hang-Yeon Weon
-
J. Microbiol. 2016;54(11):709-712. Published online October 29, 2016
-
DOI: https://doi.org/10.1007/s12275-016-6451-7
-
-
936
View
-
0
Download
-
3
Crossref
-
Abstract
PDF
-
Strain 63MJ-2T was isolated from the feces of broad-winged
katydid (Pseudorhynchus japonicus) collected in Korea. The
16S rRNA gene sequence of this strain showed the highest
sequence similarity with that of Siphonobacter aquaeclarae
P2T (96.1%) and had low similarities (below 86.3%) with those
of other members of family ‘Flexibacteraceae’. The strain
63MJ-2T is a strictly aerobic, Gram-stain-negative, non-motile,
rod-shaped bacterium. The strain grew at 4–35°C (optimum,
25–30°C), pH of 5.0–9.0 (optimum, 6.0–7.0), and
0–2.0% (optimum, 1.0–2.0) (w/v) NaCl. The DNA G+C content
of strain 63MJ-2T was 43.5 mol%. The major fatty acids
were C16:1 ω5c (42.5%), iso-C17:0 3-OH (18.7%), and summed
feature 3 (iso-C15:0 2-OH and/or C16:1 ω7c, 18.0%). The major
menaquinone was MK-7 and polar lipids were phosphatidylethanolamine,
six unknown aminolipids, and five unknown
lipids. Based on the evidence from our polyphasic
taxonomic study, we conclude that strain 63MJ-2T should be
classified as a novel species of the genus Siphonobacter, and
propose the name Siphonobacter intestinalis sp. nov. The
type strain is 63MJ-2T (=KACC 18663T =NBRC 111883T).
-
Citations
Citations to this article as recorded by - Notification of changes in taxonomic opinion previously published outside the IJSEM: List of Changes in Taxonomic Opinion no. 43
Aharon Oren, Markus Göker
International Journal of Systematic and Evolutionary Microbiology
.2026;[Epub] CrossRef - Validation List no. 227: valid publication of new names and new combinations effectively published outside the IJSEM
Aharon Oren, Markus Göker
International Journal of Systematic and Evolutionary Microbiology
.2026;[Epub] CrossRef -
Siphonobacter curvatus sp. nov., isolated from a freshwater river
Yunho Lee, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2018; 68(6): 1925. CrossRef
- Characterization of the Bacterial and Archaeal Communities in Rice Field Soils Subjected to Long-Term Fertilization Practices
-
Jae-Hyung Ahn , Jaekyeong Song , Byung-Yong Kim , Myung-Sook Kim , Jae-Ho Joa , Hang-Yeon Weon
-
J. Microbiol. 2012;50(5):754-765. Published online November 4, 2012
-
DOI: https://doi.org/10.1007/s12275-012-2409-6
-
-
781
View
-
2
Download
-
123
Crossref
-
Abstract
PDF
-
The bacterial and archaeal communities in rice field soils subjected to different fertilization regimes for 57 years were investigated in two different seasons, a non-planted, drained season (April) and a rice-growing, flooded season (August), by performing soil dehydrogenase assay, real-time PCR assay and pyrosequencing analysis. All fertilization regimes increased the soil dehydrogenase activity while the abundances of bacteria and archaea increased in the plots receiving inorganic fertilizers plus compost and not in those receiving inorganic fertilizers only. Rice-growing and flooding decreased the soil dehydrogenase activity while they increased the bacterial diversity in rice field soils. The bacterial communities were dominated by Chloroflexi, Proteobacteria, and Actinobacteria and the archaeal communities by Crenarchaeota at the phylum level. In principal coordinates analysis based on the weighted Fast UniFrac metric, the bacterial and archaeal communities were separated primarily by season, and generally distributed along with soil pH, the variation of which had been caused by long-term fertilization. Variations in the relative abundance according to the season or soil pH were observed for many bacterial and archaeal groups. In conclusion, the microbial activity, prokaryotic abundance and diversity, and prokaryotic community structure in the rice field soils were changed by season and long-term fertilization.
-
Citations
Citations to this article as recorded by - Ammoniated-decomposed rice straw return improves tobacco yield and reshapes the soil microbial community
Ping Wang, Ping Cong, Xiangyun Li, Changzheng Wu, Zubin Lin, Jianxin Dong
Industrial Crops and Products.2026; 243: 123155. CrossRef - Nitrogen and phosphorus limitation patterns of microbial nitrogen cycling traits in an arid soil
Hongfei Ji, Ying Wang, Rui Wang, Shengli Guo
Journal of Soils and Sediments.2026;[Epub] CrossRef - Integrated Rice Management Changes Soil Physicochemical Properties and Affects Rhizosphere Microbial-Community Diversity
Qianli Li, Yue Hu, Yukun Guo, Jiaqing Li, Fujing Sun, Yandong Lv, Hongyu Li, Lihua Liu, Xiaohong Guo
Journal of Soil Science and Plant Nutrition.2026; 26(1): 3274. CrossRef - Effects of different harvesting methods on soil bacterial diversity in Betula platyphylla secondary forest in Daxing 'an Mountains, inner Mongolia
Kaitao Zhai, Shengwei Liu, Hao Zhang, Rula Sa
Frontiers in Microbiology.2026;[Epub] CrossRef - Valorization of allelochemical-rich olive pomace: Comprehensive effect microbial nutrient release and ursolic acid-enhanced uptake improve crop growth and quality
Xisi Sun, Shuyang Wang, Fangzhu Guo, Junkai Wang, Guoqing Xiao, Qingfeng Wu, Yuhong Liu
Journal of Cleaner Production.2026; 571: 148774. CrossRef - Morphological and biochemical characterization of bacterial isolates from diverse soil habitats in the Amhara region, Ethiopia
Tirusew Sema Kebede, Destaw Damtie, Mulugeta Kibert, Fasika Melese, Amare Bitew, Mastewal Alehegn
Open Life Sciences.2026;[Epub] CrossRef - Fertilization enhances microbial-driven N2O emissions while film mulching mitigates fertilization-driven emissions
Linrong Han, Fuping Tian, Xiaogang Li, Jun Zhu, Zhongke Zhou, Wucheng Zhao, Yifan Yang, Feng Zhang
European Journal of Agronomy.2025; 171: 127804. CrossRef - Effects of rice cropping method and growth stage on rhizosphere bacterial diversity and soil biological attributes
Surathi ADITHYA, Sai Aparna Devi NUNNA, Chinnappan CHINNADURAI, Dananjeyan BALACHANDAR
Pedosphere.2025; 35(6): 983. CrossRef - Effects of Three Fertilizers on Improving Soil Characteristics and Growth Performance of Mahonia fortunei (Lindl.) Fedde in Rocky Desertification Areas
Xiuwen Fang, Yue Sun, Xiangxiang Huang, Bo Pan, Haiying Gao, Zhishui Liang
Land.2025; 14(5): 1090. CrossRef - Elucidating the impact of organic amendments on soil bacterial communities and strawberry yield in North Carolina
Tika B. Adhikari, Ashley N. Philbrick, Frank J. Louws
Frontiers in Sustainable Food Systems.2025;[Epub] CrossRef - Effect of molybdenum supply on crop performance through rhizosphere soil microbial diversity and metabolite variation
Muhammad Shoaib Rana, Dikhnah Alshehri, Rui-Long Wang, Muhammad Imran, Yousif Abdelrahman Yousif Abdellah, Faiz Ur Rahman, Marfat Alatawy, Hanaa Ghabban, Amany H. A. Abeed, Cheng-xiao Hu
Frontiers in Plant Science.2025;[Epub] CrossRef - Integrated ammonium and nitrate nitrogen supply alters the composition and functionalities of rice rhizosphere bacterial communities and enhances nitrogen use efficiency
Zaid KHAN, Xujian YANG, Xianting FAN, Songpo DUAN, Chunmei YANG, Mohammad Nauman KHAN, Anas IQBAL, Hong SHEN, Youqiang FU
Pedosphere.2025; 35(5): 914. CrossRef - Long-term straw retention with reducing chemical fertilizers application improves soil carbon and nitrogen fractions and microbial community composition in a double rice-cropping system
ShiQi YANG, LiMing CHEN, Wan HUANG, YanHong YI, TaoTao YANG, XueMing TAN, YongJun ZENG, XiaoHua PAN, Shan HUANG, YanHua ZENG
SCIENTIA SINICA Vitae.2025; 55(11): 2325. CrossRef -
Solicola agrisoli sp. nov., a novel actinobacterium isolated from agricultural soil in Republic of South Korea
Syed Muhammad Khizar Shah, Cong Li, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
International Journal of Systematic and Evolutionary Microbiology
.2025;[Epub] CrossRef - Biofertilizers Enhance Soil Fertility and Crop Yields Through Microbial Community Modulation
Xu Zhang, Lei Zhang, Junjie Liu, Zongzuan Shen, Zhuxiu Liu, Haidong Gu, Xiaojing Hu, Zhenhua Yu, Yansheng Li, Jian Jin, Guanghua Wang
Agronomy.2025; 15(7): 1572. CrossRef - Effects of Continuous Straw Return on Soil Nutrients and Microbial Community Structure of Paddy Fields in Northeast China
Juntao Ma, Qiuju Wang, Jiahe Zou
Agronomy.2025; 15(6): 1404. CrossRef - The Influence of Planting Method and Short-Term Organic Amendments on Rhizosphere Microbial Communities in Paddies: Preliminary Results
Ziqi Liu, Zhiqiang Tang, Lili Wang, Li Wen, Yi Liang, Changhua Wang, Hui Wang
Agronomy.2025; 15(3): 540. CrossRef - Diversity of rhizosphere microbial communities in different rice varieties and their diverse adaptive responses to saline and alkaline stress
Yu Zhong, Hai Chi, Tao Wu, Wenbo Fan, Haoyu Su, Ruoyu Li, Wenzhu Jiang, Xinglin Du, Ziming Ma
Frontiers in Microbiology.2025;[Epub] CrossRef - The Archaea domain: Exploring historical and contemporary perspectives with in silico primer coverage analysis for future research in Dentistry
Jéssica Alves de Cena, Aline Belmok, Cynthia Maria Kyaw, Naile Dame-Teixeira
Archives of Oral Biology.2024; 161: 105936. CrossRef - Seasonal and spatial characteristics of microbial community in intertidal wetlands: Aspect of microbial coupling
Qian Wang, Kejin Zong, Yinghui Wang, Guoying Zhou, Huiyu Li, Xiaohan Sun, Congcong Zhao, Yi Lv, Yinli Ji, Shuai Wang, Xianrui Song, Qiang Kong
Process Safety and Environmental Protection.2024; 188: 268. CrossRef - Effects of urban green space habitats and tree species on ectomycorrhizal fungal diversity
Qian-Cai Lin, Ying-Qing Cen, Ming Xu, Dan-Dan Jiang, Jian Zhang
Scientific Reports.2024;[Epub] CrossRef - Effects of flue gas desulfurization gypsum and clover planting on qualities of soil and winter jujube in coastal saline-alkali orchard of north China
Qi Shao, Xuejing Xia, Guihua Li, Hui Li, Jitong Lin, Yanhong Lou, Quangang Yang, Hui Wang, Zhongchen Yang, Hong Pan, Yuping Zhuge
Soil Ecology Letters.2024;[Epub] CrossRef - A study of different agricultural practices over a dozen years: Influence on soil CO2 fixation rates and soil autotrophic microbial communities
Qingfeng Wang, Changbin Chu, Zheng Zhao, Deping Zhou, Shuhang Wu
Soil and Tillage Research.2024; 239: 106067. CrossRef - Varying nitrogen fertilization and soil bacterial community dynamics at three growth phases of winter wheat production
Gabriel Hopla Akwakwa, Kem Senou Pavel Daryl, Adeel Riaz, Wang Xiaoyan
Plant Growth Regulation.2024; 104(3): 1383. CrossRef - Long-term maintenance rate fertilisation increases soil bacterial-archaeal community diversity in the subsoil and N-cycling potentials in a humid crop season
Natalia Pin Viso, Jimena Ortiz, Mariana Maury, Juan Pablo Frene, Gastón A. Iocoli, Claudio Lorenzon, Máximo Rivarola, Fernando O. García, Vicente Gudelj, Valeria S. Faggioli
Applied Soil Ecology.2024; 193: 105149. CrossRef - Bacterial communities in cropland soils: Taxonomy and functions
Ling Li, Yakov Kuzyakov, Qicheng Xu, Hanyue Guo, Chen Zhu, Junjie Guo, Shiwei Guo, Qirong Shen, Ning Ling
Plant and Soil.2024; 497(1-2): 297. CrossRef - Fertilization regime changes rhizosphere microbial community assembly and interaction in Phoebe bournei plantations
Haoyu Yan, Yang Wu, Gongxiu He, Shizhi Wen, Lili Yang, Li Ji
Applied Microbiology and Biotechnology.2024;[Epub] CrossRef - Differential effects of fresh and composted organic wastes on soil bacterial community and maize growth
Guilherme Lucio Martins, Thierry Alexandre Pellegrinetti, Anderson Santos de Freitas, Gabriel Silvestre Rocha, Gabriel Gustavo Tavares Nunes Monteiro, Lucas William Mendes, Siu Mui Tsai, Fernando Carvalho Oliveira, Jussara Borges Regitano
Applied Soil Ecology.2024; 204: 105715. CrossRef - Effect of Rice Straw and Stubble Burning on Soil Physicochemical Properties and Bacterial Communities in Central Thailand
Noppol Arunrat, Sukanya Sereenonchai, Chakriya Sansupa, Praeploy Kongsurakan, Ryusuke Hatano
Biology.2023; 12(4): 501. CrossRef - Soil microbial diversity under different types of interference in birch secondary forest in the Greater Khingan Mountains in China
Kaitao Zhai, Yongchun Hua, Jingwen Liang, Jing Li, Zirui Wang, Lei Liu, Minglong Gao, Rula Sa, Mingmin Zhao
Frontiers in Microbiology.2023;[Epub] CrossRef - Global biogeographic distribution of Bathyarchaeota in paddy soils
Shu-Dan Xue, Xing-Yun Yi, Hui-Ling Cui, Meng Li, Jing-Jing Peng, Yong-Guan Zhu, Gui-Lan Duan, Nick Bouskill
mSystems.2023;[Epub] CrossRef - Response of soils properties and archaea community to saline-sodic soils under long-term rice-based cropping system
Xuejun Du, Shunyi Wang, Zijun Xu, Jin Liu, Zideng Gao, Xueqin Ren, Ke Ma, Shuwen Hu
Archives of Agronomy and Soil Science.2023; 69(4): 533. CrossRef - Response of microbial community diversity and subsoil properties to cow manure amendment in mollisols
Juan Hu, Daowei Zhou, Rongzhen Zhong, Chengzhen Zhao, Qiang Li
Archives of Agronomy and Soil Science.2023; 69(5): 785. CrossRef - Evaluation of a subtropical maize-rice rotation system maintained under long-term fertilizer inputs for sustainable intensification of agriculture
Asif Hameed, Yu-Pei Chen, Fo-Ting Shen, Shih-Yao Lin, Hsin-I Huang, Yu-Wen Lin, Chiu-Chung Young
Applied Soil Ecology.2023; 184: 104772. CrossRef - Effects of shining pondweed (Potamogeton lucens) on fungal communities in water and rhizosphere sediments in Nansi Lake, China
Weilai Sha, Nianxin Zhang, Jing Zhou, Zihan Zhang, Yong Kong, Lei Wang, Fengyue Shu, Lei Chen, Zhijin Gong
Community Ecology.2023; 24(2): 273. CrossRef - Effects of tillage practice on fungal and actinobacterial cellulolytic community with different humified particle‐size fractions in a double‐cropping paddy field
Haiming Tang, Lihong Shi, Li Wen, Kaikai Cheng, Chao Li, Weiyan Li, Xiaoping Xiao
Land Degradation & Development.2023; 34(13): 3943. CrossRef - Rice developmental stages modulate rhizosphere bacteria and archaea co-occurrence and sensitivity to long-term inorganic fertilization in a West African Sahelian agro-ecosystem
Donald Tchouomo Dondjou, Abdala Gamby Diedhiou, Daouda Mbodj, Marie-Thérèse Mofini, Sarah Pignoly, Cheikh Ndiaye, Issa Diedhiou, Komi Assigbetse, Baboucarr Manneh, Laurent Laplaze, Aboubacry Kane
Environmental Microbiome.2023;[Epub] CrossRef - RETRACTED:<i>Effect of Long-Term Inorganic Fertilization on Diversity and Abundance of Bacterial and Archaeal Communities at Tillage in Irrigated Rice Field</i>
Donald Tchouomo Dondjou, Henri Fankem, Abdala Gamby Diedhiou, Marie-Thérèse Mofini, Daouda Mbodj, Sarah Pignoly, Baboucarr Manneh, Laurent Laplaze, Aboubacry Kane, Victor Désiré Taffouo
Advances in Bioscience and Biotechnology.2023; 14(01): 18. CrossRef - Continuous straw return for 8 years mitigates the negative effects of inorganic fertilisers on C‐cycling soil bacteria
Qian Zhang, Tengfei Guo, Kai Sheng, Wenxuan Shi, Yanlai Han, Yilun Wang, Hui Li
European Journal of Soil Science.2022;[Epub] CrossRef - Distinct responses of active and total bacterial communities to inorganic fertilization in a 30-year experimental site
Kai Ding, Xiao-Xuan Su, Hu Li, Qing-Xia Dai, Oriol Grau, Josep Peñuelas
Applied Soil Ecology.2022; 179: 104584. CrossRef - Effects of shining pondweed (Potamogeton lucens) on bacterial communities in water and rhizosphere sediments in Nansi Lake, China
Nianxin Zhang, Mengmeng Wu, Yuying Che, Yong Kong, Fengyue Shu, Qingfeng Wang, Weilai Sha, Zhijin Gong, Jing Zhou
Environmental Science and Pollution Research.2022; 29(34): 51665. CrossRef - Effects of N Application Rate and Dicyandiamide on the Fate of 15N Fertilizer and the Abundance of Microbial Genes in a Sandy Soil Amended with Sugarcane Litter
Eduardo Mariano, Beatriz N. Boschiero, Luis F. Merloti, Alexandre Pedrinho, Miriam G. Chaves, Siu M. Tsai, Paulo C. O. Trivelin
Journal of Soil Science and Plant Nutrition.2022; 22(1): 359. CrossRef - Organic amendments enhance soil microbial diversity, microbial functionality and crop yields: A meta-analysis
Xiangyang Shu, Jia He, Zhenghu Zhou, Longlong Xia, Yufu Hu, Yulin Zhang, Yanyan Zhang, Yiqi Luo, Haiyan Chu, Weijia Liu, Shu Yuan, Xuesong Gao, Changquan Wang
Science of The Total Environment.2022; 829: 154627. CrossRef - Effects of Land Reclamation on Soil Bacterial Community and Potential Functions in Bauxite Mining Area
Xuesong Li, Zhenjiang Jin, Liyuan Xiong, Lingchen Tong, Hongying Zhu, Xiaowen Zhang, Guangfa Qin
International Journal of Environmental Research and Public Health.2022; 19(24): 16921. CrossRef - Long-Term Organic–Inorganic Fertilization Regimes Alter Bacterial and Fungal Communities and Rice Yields in Paddy Soil
Tengfei Ma, Xiaohui He, Shanguo Chen, Yujia Li, Qiwei Huang, Chao Xue, Qirong Shen
Frontiers in Microbiology.2022;[Epub] CrossRef - Long-term cultivation alter soil bacterial community in a forest-grassland transition zone
Zhenyin Bai, Lingbo Zheng, Zhenjian Bai, Aomei Jia, Mingjun Wang
Frontiers in Microbiology.2022;[Epub] CrossRef - The effect of environmental parameters and fertilization practices on yield and soil microbial diversity in a Kenyan paddy rice field
Markus Gorfer, Luigimaria Borruso, Evi Deltedesco, Emily W. Gichuhi, Daniel M. Menge, Daigo Makihara, Nadine Praeg, Stefano Cesco, Tanja Mimmo, Lutz Merbold, Sonja Leitner
Applied Soil Ecology.2022; 176: 104495. CrossRef - Higher pH is associated with enhanced co‐occurrence network complexity, stability and nutrient cycling functions in the rice rhizosphere microbiome
Yaping Guo, Bin Song, Anqi Li, Qi Wu, Haili Huang, Na Li, Ying Yang, Jonathan Miles Adams, Lin Yang
Environmental Microbiology.2022; 24(12): 6200. CrossRef - Manure Application Increases Soil Bacterial and Fungal Network Complexity and Alters Keystone Taxa
Peixin Wang, Xiquan Wang, Jiangwen Nie, Yue Wang, Huadong Zang, Leanne Peixoto, Yadong Yang, Zhaohai Zeng
Journal of Soil Science and Plant Nutrition.2022; 22(1): 607. CrossRef - Pre-flooding soil used in monocropping increased strawberry biomass and altered bacterial community composition
Qingfeng Wang, Changbin Chu, Zheng Zhao, Shuhang Wu, Deping Zhou
Soil Science and Plant Nutrition.2021; 67(6): 643. CrossRef - Research Progress on the Effects of Logging and Burning on Forest Soil Microorganisms
宏林 高
International Journal of Ecology.2021; 10(04): 472. CrossRef - Alternation of soil bacterial and fungal communities by tomato–rice rotation in Hainan Island in Southeast of China
Xiang Ma, Minglun Du, Peng Liu, Yanqiong Tang, Hong Li, Qianhua Yuan, Yunze Ruan, Lei Meng, Jiachao Zhang, Min Lin, Zhu Liu
Archives of Microbiology.2021; 203(3): 913. CrossRef - Effects of Short-Term Rice Straw Return on the Soil Microbial Community
Enze Wang, Xiaolong Lin, Lei Tian, Xinguang Wang, Li Ji, Feng Jin, Chunjie Tian
Agriculture.2021; 11(6): 561. CrossRef - Balanced fertilization over four decades has sustained soil microbial communities and improved soil fertility and rice productivity in red paddy soil
Jia Lin Wang, Kai Lou Liu, Xue Qiang Zhao, Hao Qing Zhang, Dong Li, Jiao Jiao Li, Ren Fang Shen
Science of The Total Environment.2021; 793: 148664. CrossRef - Long-Term Manure Application Changes Bacterial Communities in Rice Rhizosphere and Arsenic Speciation in Rice Grains
Xianjin Tang, Lina Zou, Shiming Su, Yanhong Lu, Weiwei Zhai, Maria Manzoor, Yulin Liao, Jun Nie, Jiyan Shi, Lena Q. Ma, Jianming Xu
Environmental Science & Technology.2021; 55(3): 1555. CrossRef - Comparison of bacterial and archaeal communities in two fertilizer doses and soil compartments under continuous cultivation system of garlic
Jing Zhou, Yong Kong, Wangfeng Zhao, Guangshan Wei, Qingfeng Wang, Longchuan Ma, Taotao Wang, Fengyue Shu, Weilai Sha, Mehdi Rahimi
PLOS ONE.2021; 16(5): e0250571. CrossRef - Relationship between Plant Roots, Rhizosphere Microorganisms, and Nitrogen and Its Special Focus on Rice
Qiangqiang Xiong, Jinlong Hu, Haiyan Wei, Hongcheng Zhang, Jinyan Zhu
Agriculture.2021; 11(3): 234. CrossRef - Long‐term inorganic nitrogen application changes the ammonia‐oxidizing archaeal community composition in paddy soils
Sandipan Samaddar, Jaak Truu, Poulami Chatterjee, Kristjan Oopkaup, Marika Truu, Kiyoon Kim, Sookjin Kim, Radomir Schmidt, Aritra Roy Choudhury, Jeongyun Choi, Tongmin Sa
European Journal of Soil Science.2021; 72(5): 2246. CrossRef - Unraveling Mechanisms and Impact of Microbial Recruitment on Oilseed Rape (Brassica napus L.) and the Rhizosphere Mediated by Plant Growth-Promoting Rhizobacteria
Ying Liu, Jie Gao, Zhihui Bai, Shanghua Wu, Xianglong Li, Na Wang, Xiongfeng Du, Haonan Fan, Guoqiang Zhuang, Tsing Bohu, Xuliang Zhuang
Microorganisms.2021; 9(1): 161. CrossRef - Different responses of soil carbon chemistry to fertilization regimes in the paddy soil and upland soil were mainly reflected by the opposite shifts of OCH and alkyl C
Dandan Li, Kailou Liu, Qinghai Huang, Jiabao Zhang, Bingzi Zhao
Geoderma.2021; 385: 114876. CrossRef - Responses of archaeal, bacterial, and functional microbial communities to growth season and nitrogen fertilization in rice fields
Yang Ji, Ralf Conrad, Hua Xu
Biology and Fertility of Soils.2020; 56(1): 81. CrossRef - Shifts in microbial communities and networks are correlated with the soil ionome in a kiwifruit orchard under different fertilization regimes
Zhe Liu, Xuemiao Ma, Nan He, Jia Zhang, Juan Wu, Cunshou Liu
Applied Soil Ecology.2020; 149: 103517. CrossRef - Phosphorus Input Alters the Assembly of Rice (Oryza sativa L.) Root-Associated Communities
Xi-En Long, Huaiying Yao
Microbial Ecology.2020; 79(2): 357. CrossRef - Re-Analysis of 16S Amplicon Sequencing Data Reveals Soil Microbial Population Shifts in Rice Fields under Drought Condition
Seok-Won Jang, Myeong-Hyun Yoou, Woo-Jong Hong, Yeon-Ju Kim, Eun-Jin Lee, Ki-Hong Jung
Rice.2020;[Epub] CrossRef - Land use change from upland to paddy field in Mollisols drives soil aggregation and associated microbial communities
Xin Li, Huihui Zhang, Minglong Sun, Nan Xu, Guangyu Sun, Meichun Zhao
Applied Soil Ecology.2020; 146: 103351. CrossRef - Combined Application of Organic and Inorganic Nitrogen Fertilizers Affects Soil Prokaryotic Communities Compositions
Liyuan Liu, Chuanzong Li, Shuhao Zhu, Yan Xu, Houyu Li, Xiangqun Zheng, Rongguang Shi
Agronomy.2020; 10(1): 132. CrossRef - Effects of rice straw and rice straw ash on rice growth and α-diversity of bacterial community in rare-earth mining soils
Shulan Jin, Wei Jin, Chengxu Dong, Yijun Bai, Decai Jin, Zhongjun Hu, Yizong Huang
Scientific Reports.2020;[Epub] CrossRef - Discovering the bacteriome of Vitis vinifera cv. Pinot Noir in a conventionally managed vineyard
Elisa Gamalero, Elisa Bona, Giorgia Novello, Lara Boatti, Flavio Mignone, Nadia Massa, Patrizia Cesaro, Graziella Berta, Guido Lingua
Scientific Reports.2020;[Epub] CrossRef - Nitrogen leaching greatly impacts bacterial community and denitrifiers abundance in subsoil under long-term fertilization
Mengshuai Liu, Wenhui Zhang, Xiaogai Wang, Fenghua Wang, Wenxu Dong, Chunsheng Hu, Binbin Liu, Ruibo Sun
Agriculture, Ecosystems & Environment.2020; 294: 106885. CrossRef - Diversity and structure of bacterial community in rhizosphere of lima bean
Regina Maria Silva Sousa, Lucas William Mendes, Jadson Emanuel Lopes Antunes, Louise Melo de Souza Oliveira, Antonia Maria de Cassia Batista Sousa, Regina Lucia Ferreira Gomes, Angela Celis de Almeida Lopes, Fábio Fernando Araújo, Vania Maria Maciel Melo,
Applied Soil Ecology.2020; 150: 103490. CrossRef - Comparison of soil bacterial diversity and community composition between clear-cut logging and control sites in a temperate deciduous broad-leaved forest in Mt. Sambong, South Korea
Byeong-Ju Lee, Soo Hyung Eo
Journal of Forestry Research.2020; 31(6): 2367. CrossRef - Microbial Communities Associated With Long-Term Tillage and Fertility Treatments in a Corn-Soybean Cropping System
Ali Y. Srour, Hala A. Ammar, Arjun Subedi, Mirian Pimentel, Rachel L. Cook, Jason Bond, Ahmad M. Fakhoury
Frontiers in Microbiology.2020;[Epub] CrossRef - Biochar Effects on Bacterial Community and Metabolic Pathways in Continuously Cotton-Cropped Soil
Guangming Han, Quanqiu Chen, Shengxi Zhang, Guorong Li, Xianda Yi, Changhui Feng, Xiaogang Wang, Cui Yu, Jiayang Lan
Journal of Soil Science and Plant Nutrition.2019; 19(2): 249. CrossRef - The 19-years inorganic fertilization increased bacterial diversity and altered bacterial community composition and potential functions in a paddy soil
Qiong Huang, Jianlei Wang, Cong Wang, Qing Wang
Applied Soil Ecology.2019; 144: 60. CrossRef - Dynamics of Bacterial Communities in a 30-Year Fertilized Paddy Field under Different Organic–Inorganic Fertilization Strategies
Yadong Yang, Peixin Wang, Zhaohai Zeng
Agronomy.2019; 9(1): 14. CrossRef - Utilization of carbon sources in the rice rhizosphere and nonrhizosphere soils with different long‐term fertilization management
Haiming Tang, Xiaoping Xiao, Yilan Xu, Chao Li, Kaikai Cheng, Xiaochen Pan, Weiyan Li
Journal of Basic Microbiology.2019; 59(6): 621. CrossRef - Taking insight into the gut microbiota of three spider species: No characteristic symbiont was found corresponding to the special feeding style of spiders
Guowen Hu, Lihua Zhang, Yueli Yun, Yu Peng
Ecology and Evolution.2019; 9(14): 8146. CrossRef - Long-term application of manure over plant residues mitigates acidification, builds soil organic carbon and shifts prokaryotic diversity in acidic Ultisols
Guiping Ye, Yongxin Lin, Deyan Liu, Zengming Chen, Jiafa Luo, Nanthi Bolan, Jianbo Fan, Weixin Ding
Applied Soil Ecology.2019; 133: 24. CrossRef - Short-term response of the soil bacterial community to differing wildfire severity in Pinus tabulaeformis stands
Weike Li, Shukui Niu, Xiaodong Liu, Jianming Wang
Scientific Reports.2019;[Epub] CrossRef - Integrating environmental parameters and economic benefits to analyze the ecological agriculture (EA) application in the mountain rice paddy system of Chongqing, China
Ying Shao, Zhongli Chen, Hongyan Xiao, Zihan Zhu, Bo Li
Environmental Sciences Europe.2019;[Epub] CrossRef - Effects of Long-Term Application of Vinasse on Physicochemical Properties, Heavy Metals Content and Microbial Diversity in Sugarcane Field Soil
Juan Yin, Chao-Bing Deng, Xiao-Fei Wang, Gan-lin Chen, Viktor Gábor Mihucz, Gui-Ping Xu, Qu-Cheng Deng
Sugar Tech.2019; 21(1): 62. CrossRef - Long-term N fertilization altered 13C-labeled fungal community composition but not diversity in wheat rhizosphere of Chinese black soil
Qingfeng Wang, Mingchao Ma, Xin Jiang, Baoku Zhou, Dawei Guan, Fengming Cao, Sanfeng Chen, Jun Li
Soil Biology and Biochemistry.2019; 135: 117. CrossRef - Decrease in diversity and shift in composition of the soil bacterial community were closely related to high available phosphorus in agricultural Fluvisols of North China
Chenxu Liu, Xiaorong Zhao, Qimei Lin, Guitong Li
Acta Agriculturae Scandinavica, Section B — Soil & Plant Science.2019; 69(7): 618. CrossRef - Bacterial and Fungal Communities Are Differentially Modified by Melatonin in Agricultural Soils Under Abiotic Stress
Andrew P. Madigan, Eleonora Egidi, Frank Bedon, Ashley E. Franks, Kim M. Plummer
Frontiers in Microbiology.2019;[Epub] CrossRef - The stabilizing mechanism of cadmium in contaminated soil using green synthesized iron oxide nanoparticles under long-term incubation
Jiajiang Lin, Fengxin He, Binglin Su, Mengqiang Sun, Gary Owens, Zuliang Chen
Journal of Hazardous Materials.2019; 379: 120832. CrossRef - Application of phosphate-containing materials affects bioavailability of rare earth elements and bacterial community in soils
ShuLan Jin, ZhongJun Hu, BaiYing Man, HuaHua Pan, Xiao Kong, DeCai Jin
Science China Technological Sciences.2019; 62(9): 1616. CrossRef - Long-term silicate fertilization increases the abundance of Actinobacterial population in paddy soils
Sandipan Samaddar, Jaak Truu, Poulami Chatterjee, Marika Truu, Kiyoon Kim, Sukjin Kim, Sundaram Seshadri, Tongmin Sa
Biology and Fertility of Soils.2019; 55(2): 109. CrossRef - Shifts in bacterial community composition increase with depth in three soil types from paddy fields in China
Xu Li, Huanhuan Wang, Xiang Li, Xinyu Li, Huiwen Zhang
Pedobiologia.2019; 77: 150589. CrossRef - Continuous application of inorganic and organic fertilizers over 47 years in paddy soil alters the bacterial community structure and its influence on rice production
Upendra Kumar, Amaresh Kumar Nayak, Mohammad Shahid, Vadakattu V.S.R. Gupta, P. Panneerselvam, Sangita Mohanty, Megha Kaviraj, Anjani Kumar, Dibyendu Chatterjee, B. Lal, P. Gautam, Rahul Tripathi, B.B. Panda
Agriculture, Ecosystems & Environment.2018; 262: 65. CrossRef - Crop Rotation and Straw Application Impact Microbial Communities in Italian and Philippine Soils and the Rhizosphere of Zea mays
Sarah A. Maarastawi, Katharina Frindte, Marius Linnartz, Claudia Knief
Frontiers in Microbiology.2018;[Epub] CrossRef - Differences in rice rhizosphere bacterial community structure by application of lignocellulolytic plant-probiotic bacteria with rapid composting traits
Thounaojam Nevita, G.D. Sharma, Piyush Pandey
Ecological Engineering.2018; 120: 209. CrossRef - Effect of long-term fertilization strategies on bacterial community composition in a 35-year field experiment of Chinese Mollisols
Mingchao Ma, Jing Zhou, Marc Ongena, Wenzheng Liu, Dan Wei, Baisuo Zhao, Dawei Guan, Xin Jiang, Jun Li
AMB Express.2018;[Epub] CrossRef - Long-term fertilization changes bacterial diversity and bacterial communities in the maize rhizosphere of Chinese Mollisols
Qingfeng Wang, Xin Jiang, Dawei Guan, Dan Wei, Baisuo Zhao, Mingchao Ma, Sanfeng Chen, Li Li, Fengming Cao, Jun Li
Applied Soil Ecology.2018; 125: 88. CrossRef - Agriculturally relevant microbial community structure in long-term fertilized paddy soils as revealed by phospholipid fatty acid (PLFA) and pyrosequencing analyses
Saranya Kuppusamy, Aillen Rose Daquiado, Song Yeob Kim, Young-Eun Yoon, Jang Hwan Kim, Sook Jin Kim, Yong Bok Lee
Archives of Agronomy and Soil Science.2018; 64(10): 1379. CrossRef - Insight into the Aggregation Capacity of Anammox Consortia during Reactor Start-Up
Yunpeng Zhao, Ying Feng, Jianqi Li, Yongzhao Guo, Liming Chen, Sitong Liu
Environmental Science & Technology.2018; 52(6): 3685. CrossRef - Effects of reclaimed water irrigation and nitrogen fertilization on the chemical properties and microbial community of soil
Wei GUO, Mathias N Andersen, Xue-bin QI, Ping LI, Zhong-yang LI, Xiang-yang FAN, Yuan ZHOU
Journal of Integrative Agriculture.2017; 16(3): 679. CrossRef - Effect of fertilization on soil microorganisms in paddy rice systems – A meta-analysis
Daniel Geisseler, Bruce A. Linquist, Patricia A. Lazicki
Soil Biology and Biochemistry.2017; 115: 452. CrossRef - The effect of different organic materials amendment on soil bacteria communities in barren sandy loam soil
Hongcui Dai, Yuanquan Chen, Xiaolei Yang, Jixiao Cui, Peng Sui
Environmental Science and Pollution Research.2017; 24(30): 24019. CrossRef - Response of Methanogenic Microbial Communities to Desiccation Stress in Flooded and Rain-Fed Paddy Soil from Thailand
Andreas Reim, Marcela Hernández, Melanie Klose, Amnat Chidthaisong, Monthira Yuttitham, Ralf Conrad
Frontiers in Microbiology.2017;[Epub] CrossRef - Consistent effects of nitrogen fertilization on soil bacterial communities in black soils for two crop seasons in China
Jing Zhou, Xin Jiang, Dan Wei, Baisuo Zhao, Mingchao Ma, Sanfeng Chen, Fengming Cao, Delong Shen, Dawei Guan, Jun Li
Scientific Reports.2017;[Epub] CrossRef - Ammonia Oxidizing Archaea and Bacteria in East Asian Paddy Soils—A Mini Review
Hussnain Mukhtar, Yu-Pin Lin, Johnathen Anthony
Environments.2017; 4(4): 84. CrossRef - Bacterial diversity of the rhizosphere and nearby surface soil of rice (Oryza sativa) growing in the Camargue (France)
Jorge R. Osman, Gustavo Fernandes, Michael S. DuBow
Rhizosphere.2017; 3: 112. CrossRef - Evident variations of fungal and actinobacterial cellulolytic communities associated with different humified particle-size fractions in a long-term fertilizer experiment
Qian Zhang, Guoqing Liang, Tengfei Guo, Ping He, Xiubin Wang, Wei Zhou
Soil Biology and Biochemistry.2017; 113: 1. CrossRef - Stratification of Diversity and Activity of Methanogenic and Methanotrophic Microorganisms in a Nitrogen-Fertilized Italian Paddy Soil
Annika Vaksmaa, Theo A. van Alen, Katharina F. Ettwig, Elisabetta Lupotto, Giampiero Valè, Mike S. M. Jetten, Claudia Lüke
Frontiers in Microbiology.2017;[Epub] CrossRef - Silica fertilization and nano-MnO2 amendment on bacterial community composition in high arsenic paddy soils
Jihai Shao, Yaxian He, Huiling Zhang, Anwei Chen, Ming Lei, Junfeng Chen, Liang Peng, Ji-Dong Gu
Applied Microbiology and Biotechnology.2016; 100(5): 2429. CrossRef - Dynamics of bacterial communities in rice field soils as affected by different long-term fertilization practices
Jae-Hyung Ahn, Shin Ae Lee, Jeong Myeong Kim, Myung-Sook Kim, Jaekyeong Song, Hang-Yeon Weon
Journal of Microbiology.2016; 54(11): 724. CrossRef - Wheat and Rice Growth Stages and Fertilization Regimes Alter Soil Bacterial Community Structure, But Not Diversity
Jichen Wang, Chao Xue, Yang Song, Lei Wang, Qiwei Huang, Qirong Shen
Frontiers in Microbiology.2016;[Epub] CrossRef - Thirty four years of nitrogen fertilization decreases fungal diversity and alters fungal community composition in black soil in northeast China
Jing Zhou, Xin Jiang, Baoku Zhou, Baisuo Zhao, Mingchao Ma, Dawei Guan, Jun Li, Sanfeng Chen, Fengming Cao, Delong Shen, Jie Qin
Soil Biology and Biochemistry.2016; 95: 135. CrossRef - Distribution and activity of the anaerobic methanotrophic community in a nitrogen-fertilized Italian paddy soil
A. Vaksmaa, C. Lüke, T. van Alen, G. Valè, E. Lupotto, M. S. M Jetten, K. F. Ettwig, Gary King
FEMS Microbiology Ecology.2016; 92(12): fiw181. CrossRef - Crop rotation of flooded rice with upland maize impacts the resident and active methanogenic microbial community
Björn Breidenbach, Martin B. Blaser, Melanie Klose, Ralf Conrad
Environmental Microbiology.2016; 18(9): 2868. CrossRef - Pyrosequencing analysis of bacterial community diversity in long-term fertilized paddy field soil
Aileen Rose Daquiado, Saranya Kuppusamy, Song Yeob Kim, Jang Hwan Kim, Young-Eun Yoon, Pil Joo Kim, Sung-Hwan Oh, Youn-Sig Kwak, Yong Bok Lee
Applied Soil Ecology.2016; 108: 84. CrossRef - Influence of 34-years of fertilization on bacterial communities in an intensively cultivated black soil in northeast China
Jing Zhou, Dawei Guan, Baoku Zhou, Baisuo Zhao, Mingchao Ma, Jie Qin, Xin Jiang, Sanfeng Chen, Fengming Cao, Delong Shen, Jun Li
Soil Biology and Biochemistry.2015; 90: 42. CrossRef - Bacterial diversity in soils subjected to long-term chemical fertilization can be more stably maintained with the addition of livestock manure than wheat straw
Ruibo Sun, Xue-Xian Zhang, Xisheng Guo, Daozhong Wang, Haiyan Chu
Soil Biology and Biochemistry.2015; 88: 9. CrossRef - Microbial community analysis in rice paddy soils irrigated by acid mine drainage contaminated water
Min Sun, Tangfu Xiao, Zengping Ning, Enzong Xiao, Weimin Sun
Applied Microbiology and Biotechnology.2015; 99(6): 2911. CrossRef - Impact of long-term fertilizer treatment on the microeukaryotic community structure of a rice field soil
Jun Murase, Azusa Hida, Kaori Ogawa, Toshihiro Nonoyama, Nanako Yoshikawa, Katsuhiko Imai
Soil Biology and Biochemistry.2015; 80: 237. CrossRef - Patterns of Bacterial Diversity Along a Long-Term Mercury-Contaminated Gradient in the Paddy Soils
Yu-Rong Liu, Jian-Jun Wang, Yuan-Ming Zheng, Li-Mei Zhang, Ji-Zheng He
Microbial Ecology.2014; 68(3): 575. CrossRef - Methane emission and dynamics of methanotrophic and methanogenic communities in a flooded rice field ecosystem
Hyo Jung Lee, Sang Yoon Kim, Pil Joo Kim, Eugene L. Madsen, Che Ok Jeon
FEMS Microbiology Ecology.2014; 88(1): 195. CrossRef - Ammonia oxidizer abundance in paddy soil profile with different fertilizer regimes
Jichen Wang, Li Zhang, Qiang Lu, Waseem Raza, Qiwei Huang, Qirong Shen
Applied Soil Ecology.2014; 84: 38. CrossRef - Effect of long-term different fertilization on bacterial community structures and diversity in citrus orchard soil of volcanic ash
Jae Ho Joa, Hang Yeon Weon, Hae Nam Hyun, Young Chull Jeun, Sang Wook Koh
Journal of Microbiology.2014; 52(12): 995. CrossRef - Analysis of Community Structure of Metabolically Active Bacteria in a Rice Field Subjected to Long-Term Fertilization Practices
Jae-Hyung Ahn, Min-Young Choi, Hye-Won Lee, Byung-Yong Kim, Jaekyeong Song, Myung-Sook Kim, Hang-Yeon Weon
Korean Journal of Soil Science and Fertilizer.2013; 46(6): 585. CrossRef - Structure and function of the methanogenic microbial communities in Uruguayan soils shifted between pasture and irrigated rice fields
Ana Fernandez Scavino, Yang Ji, Judith Pump, Melanie Klose, Peter Claus, Ralf Conrad
Environmental Microbiology.2013; 15(9): 2588. CrossRef - Comparative Analysis of Endophytic Bacterial Communities in the Roots of Rice Grown under Long-term Fertilization Practice using Pyrosequencing Method
Byung-Yong Kim, Jae-Hyung Ahn, Jaekyeong Song, Myung-Sook Kim, Hang-Yeon Weon
Korean Journal of Soil Science and Fertilizer.2012; 45(6): 1100. CrossRef - Application of Amplicon Pyrosequencing in Soil Microbial Ecology
Jae-Hyung Ahn, Byung-Yong Kim, Dae-Hoon Kim, Jaekyeong Song, Hang-Yeon Weon
Korean Journal of Soil Science and Fertilizer.2012; 45(6): 1073. CrossRef
- Gaetbulibacter jejuensis sp. nov., Isolated from Seawater
-
You-Sung Oh , Sang-Bin Lim , Hyung-Yeel Kahng , Byoung-Jun Yoon , Duck-Chul Oh , Jae-Ho Joa , Dong-Heon Lee
-
J. Microbiol. 2010;48(3):307-311. Published online June 23, 2010
-
DOI: https://doi.org/10.1007/s12275-010-9232-8
-
-
751
View
-
0
Download
-
3
Crossref
-
Abstract
PDF
-
A novel marine bacterium, designated strain CNURIC014T was isolated from coastal seawater of Jeju Island in Korea. Strain CNURIC014T formed yellow colonies on marine agar 2216 and the cells were Gram-negative, non-motile, strictly aerobic, rod-shaped. The temperature, pH and NaCl ranges for growth were 15-37°C, pH 6.0-9.0 and 1.0-7.0% NaCl. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain CNURIC014T was most closely related to Gaetbulibacter marinus and Gaetbulibacter saemankumensis, with a sequence similarity of 95.1% and 94.6%, respectively. The DNA G+C content of the strain was 33.1 mol% and the major respiratory quinone was menaquinone-6. The major cellular fatty acids were iso-C15:1 (22.8%), iso-C15:0 (18.8%), summed feature 3 (iso-C15:0 2-OH/C16:1 ω7c, 12.9%) and iso-C17:0 3-OH (11.5%). On the basis of phenotypic, phylogenetic, and genotypic data, strain CNURIC014T represents a novel species within the
genus Geatbulibacter, for which the name Gaetbulibacter jejuensis sp. nov. is proposed. The type strain is CNURIC014T (=KCTC 22615T =JCM 15976T).
-
Citations
Citations to this article as recorded by - Validation List no. 222. Valid publication of new names and new combinations effectively published outside the IJSEM
Aharon Oren, Markus Göker
International Journal of Systematic and Evolutionary Microbiology
.2025;[Epub] CrossRef - Genome sequence of Gaetbulibacter sp. PBL-D1 isolated from a Malaysian beach: insights into glycoside hydrolase repertoires
Ummirul Mukminin Kahar, Najiha Atiqah Md Nor, Wan Nur Izrena Wan Izanni
BMC Genomic Data.2025;[Epub] CrossRef - Analysis of components according to different collecting time and production method in sun-dried salt
Yong-Xie Jin, Haeng-Ryan Kim, So-Young Kim
Korean Journal of Food Preservation.2013; 20(6): 791. CrossRef
|
MSK
