Journal of Microbiology

Hyun-Jung Kim

2 Articles

Leucobacter kyeonggiensis sp. nov., a New Species Isolated from Dye Waste Water: Hyun-jung Kim , Sang-Seob Lee; J. Microbiol. 2011;49(6):1044-1049. Published online December 28, 2011; DOI: https://doi.org/10.1007/s12275-011-1548-5

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A Gram-positive, aerobic, non-motile bacterium designated F3-P9T, was isolated from dye waste water in Korea and was characterized using a polyphasic taxonomic approach. Comparative 16S rRNA gene sequence analysis showed that strain F3-P9T belongs to genus Leucobacter. The 16S rRNA gene sequence similarities
among strain F3-P9T and validated representatives of the genus Leucobacter ranged from 95.9-97.4%. Strain F3-P9T exhibited DNA-DNA relatedness values below 48% with respect to Leucobacter species. The G+C content of the genomic DNA was 67.5 mol%. F3-P9T contained MK-11 as the major respiratory quinone. The major fatty acids were anteiso-C15:0 (48.5%), anteiso-C17:0 (22.7%), and iso-C16:0 (14.5%). The peptidoglycan was composed of L-2,4-diaminbutyric acid, alanine, glycine, and glutamic acid. The polar lipid profile showed a major amount of diphosphatidylglycerol (DPG), a moderate amount of phosphatidylglycerol (PG), and two unknown glycolipids. On the basis of its phenotypic and genotypic properties and its phylogenetic distinctiveness, strain F3-P9T (KEMC 211-128T =KACC 16572T =JCM 17539T) should be classified in the genus Leucobacter as the type strain of a novel species, for which the name Leucobacter kyeonggiensis sp. nov. is proposed.

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Variation of the Intergenic Spacer (IGS) Region of Ribosomal DNA among Fusarium oxysporum formae speciales: Hyun-Jung Kim , Yong-Keel Choi , Byung-Re Min; J. Microbiol. 2001;39(4):265-272.

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Abstract PDF: Variation within the intergenic spacer (IGS) of the ribosomal DNA gene for twenty-two strains of F. oxysporum and its formae speciales was examined by PCR, coupled with RFLP analysis. The length of the amplified IGS region was about 2.6 kb in all strains except F. oxysporum f. sp. cucumerinum from Korea and F. oxysporum f. sp. niveum. Those two strains were 2.5 kb long. Restriction digestion of IGS-RFLP regions by EcoRI, NruI, HincII, SalI, SmaI, BglII, HindIII, XhoI, and KpnI gave rise to nine IGS haplotypes among all strains. Cluster analysis based on the presence or absence of comigrating restriction fragments show the two groups based on 44% genetic similarity. These results demonstrated that analysis of IGS showed some difference within and between F. oxysporum formae speciales.

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