Journal of Microbiology

Hee-Mock Oh

10 Articles

Flavihumibacter profundi sp. nov., isolated from eutrophic freshwater sediment: Ting-Ting Ren , Chun-Zhi Jin , Feng-Jie Jin , Taihua Li , Chang-Jin Kim , Hee-Mock Oh , Hyung-Gwan Lee , Long Jin; J. Microbiol. 2018;56(7):467-471. Published online June 28, 2018; DOI: https://doi.org/10.1007/s12275-018-7567-8

1,089 View
0 Download
11 Crossref

A Gram-stain-positive, aerobic, non-motile, non-spore-forming, and rod-shaped bacterium, designated strain CHu64- 6-1T, was isolated from a 67-cm-long sediment core collected from the Daechung Reservoir at a water depth of 17-m in Daejeon, Republic of Korea. Comparative 16S rRNA gene sequence studies placed the new isolate in the class Sphingobacteriia, and the isolate is notably most closely related to Flavihumibacter sediminis CJ663T (98.1% similarity), Flavihumibacter solisilvae 3-3T (97.8%), Flavihumibacter petaseus T41T (97.5%), Flavihumibacter cheonanensis WS16T (97.4%), and Flavihumibacter stibioxidans YS-17T (97.2%). The cells of strain CHu64-6-1T formed yellow colonies on R2A agar and contained MK-7 as the only menaquinone, phosphatidylethanolamine, an unidentified phospholipid, and two unidentified aminolipids as the major polar lipids, and C15:0 iso, C17:0 iso 3-OH, C15:1 iso G, and C16:1 ω5c as the major fatty acids (> 5%). The DNA G + C content of the genome was determined to be 46.5 mol%. The DNA-DNA hybridization values of strain CHu64-6-1T with F. sediminis CJ663T, F. solisilvae 3-3T, F. petaseus T41T, F. cheonanensis WS16T, and F. stibioxidans YS-17T were 12.4–33.2%. Based on the combined genotypic and phenotypic data, we propose that strain CHu64-6-1T represents a novel species of the genus Flavihumibacter, for which the name Flavihumibacter profundi sp. nov. is proposed. The type strain is CHu64-6-1T (= KCTC 62290T = CCTCC AB 2018060T).

Citations

Citations to this article as recorded by

Flavihumibacter fluminis sp. nov., a novel thermotolerant bacterium isolated from river silt
Bai Guo, Weidong Mu, Sidi Mao, Shucheng Li, Shaomei Yang, Aijv Liu, Shuzhen Wei, Xiuyun Li, Feng Sang, Hongkuan Deng, Yuling Dong, Hongliang Liu, Zhiwei Chen
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Lacibacter sediminis sp. nov., isolated from contaminated freshwater sediment
Ye Zhuo, Chun-Zhi Jin, Feng-Jie Jin, Hee-Mock Oh, Hyung-Gwan Lee, Taihua Li, Long Jin
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Flavihumibacter fluminis sp. nov. and Flavihumibacter rivuli sp. nov., isolated from a freshwater stream
Miri S. Park, Hyeonuk Sa, Ilnam Kang, Jang-Cheon Cho
Journal of Microbiology.2022; 60(8): 806. CrossRef
Responses of bacterial communities and organic matter degradation in surface sediment to Macrobrachium nipponense bioturbation
Yiran Hou, Bing Li, Gongcheng Feng, Chengfeng Zhang, Jie He, Haidong Li, Jian Zhu
Science of The Total Environment.2021; 759: 143534. CrossRef
Description of desferrioxamine-producing bacterium Chitinophaga agrisoli sp. nov., isolated from soil
Chun-Zhi Jin, Long Jin, Dong Hyo Kang, Min-Jiao Liu, Jong Min Lee, Dong-Jin Park, Chang-Jin Kim
Antonie van Leeuwenhoek.2021; 114(6): 741. CrossRef
Reactivation of Frozen Stored Microalgal-Bacterial Granular Sludge under Aeration and Non-Aeration Conditions
Yao Shen, Lin Zhu, Bin Ji, Siqi Fan, Yabin Xiao, Yingqun Ma
Water.2021; 13(14): 1974. CrossRef
Positive effects of zeolite powder on aerobic granulation: Nitrogen and phosphorus removal and insights into the interaction mechanisms
Huihua Lin, Rui Ma, Junhao Lin, Shichang Sun, Xiangli Liu, Peixin Zhang
Environmental Research.2020; 191: 110098. CrossRef
Caulobacter soli sp. nov., isolated from soil sampled at Jiri Mountain, Republic of Korea
Yuanyuan Yang, Chun-Zhi Jin, Feng-Jie Jin, Taihua Li, Jong-Min Lee, Chang-Jin Kim, Hyung-Gwan Lee, Long Jin
International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4158. CrossRef
Lysobacter profundi sp. nov., isolated from freshwater sediment and reclassification of Lysobacter panaciterrae as Luteimonas panaciterrae comb. nov.
Chun-Zhi Jin, Xiuli Song, Yun Ju Sung, Feng-Jie Jin, Taihua Li, Hee-Mock Oh, Hyung-Gwan Lee, Long Jin
International Journal of Systematic and Evolutionary Microbiology .2020; 70(6): 3878. CrossRef
Lacisediminihabitans profunda gen. nov., sp. nov., a member of the family Microbacteriaceae isolated from freshwater sediment
Ye Zhuo, Chun-Zhi Jin, Feng-Jie Jin, Taihua Li, Dong Hyo Kang, Hee-Mock Oh, Hyung-Gwan Lee, Long Jin
Antonie van Leeuwenhoek.2020; 113(3): 365. CrossRef
List of new names and new combinations that have appeared in effective publications outside of the IJSEM and are submitted for valid publication
Aharon Oren, George M. Garrity
International Journal of Systematic and Evolutionary Microbiology .2019;[Epub] CrossRef

Dynamic variation of toxic and non-toxic Microcystis proportion in the eutrophic Daechung Reservoir in Korea: Seung-Hyun Joung , Hee-Mock Oh , Kyung-A You; J. Microbiol. 2016;54(8):543-550. Published online August 2, 2016; DOI: https://doi.org/10.1007/s12275-016-6141-5

950 View
0 Download
13 Crossref

Abstract PDF

This study was conducted to determine the environmental factors affecting the level of potentially toxic Microcystis. The long-term tendencies of temperature, precipitation, and water quality factors were analyzed to determine the environmental characteristics of the Daechung Reservoir in Korea, and water samples were directly collected to analyze the dynamics of toxic and non-toxic Microcystis at weekly intervals from May to October 2012. Microcystis was the dominant genus during the study period, and it was composed of potentially toxic and non-toxic Microcystis. The fraction of potentially toxic Microcystis ranged from 6.0% to 61.1%. The amount of toxic Microcystis was highly related to the intracellular microcystin concentration (r = 0.760, P < 0.01). Therefore, the fraction of potentially toxic Microcystis is an important concern in Microcystis blooming because the intracellular microcystin concentration may reflect microcystin levels in the water. The prevalence of potentially toxic Microcystis was highly related to water temperature in Daechung Reservoir (r = 0.585, P < 0.01). Thus, temperature increase during Microcystis blooming may lead to more frequent toxic Microcystis blooms in eutrophic water bodies.

Citations

Citations to this article as recorded by

How Extreme Droughts Change the Impact of Eutrophic Reservoir on Its Outflow, with Special References to Planktonic Cyanobacteria and Their Secondary Metabolites?
Magdalena Grabowska, Hanna Mazur-Marzec, Adam Więcko
Water.2025; 17(1): 86. CrossRef
Combined effects of spinetoram and Microcystis aeruginosa on Daphnia pulex offspring: Maternal effects and multigenerational implications
Xuexia Zhu, Yihe Zhan, Xuanhe Jia, Meng Li, Tianchi Yin, Jun Wang
Chemosphere.2024; 352: 141376. CrossRef
Research on the Analysis of and Countermeasures for the Eutrophication of Water Bodies: Waihu Reservoir as a Case Study
Yiting Qi, Xin Cao, Ruisi Cao, Mingjie Cao, Ailan Yan, Erpeng Li, Dong Xu
Processes.2024; 12(4): 796. CrossRef
Water Quality Assessment and Genetic Insights into Cyanobacterial Toxin Presence in Gyeonggi Province Reservoirs
Soon-Mi Go, Yong-Jun Kim, Yeong-Yeon Kim, Kyeong-Hui Kang, Kyu-Seung Shim, Hee-Cheon Moon, Ju-Yong Jeong
Journal of Environmental Analysis, Health and Toxicology.2024; 27(3): 132. CrossRef
Nitrogen availability controls response of microcystin concentration to phosphorus reduction: Evidence from model application to multiple lakes
Charlotte Schampera, Ferdi L. Hellweger
Harmful Algae.2024; 139: 102711. CrossRef
Toxicity Reduction of Microcystis Aeruginosa Using Microbubble Ozonation
Gwiwoong Nam, Min-Seo Jeon, Yoon-E Choi, Jinho Jung
Ozone: Science & Engineering.2023; 45(2): 182. CrossRef
Chemodiversity of Cyanobacterial Toxins Driven by Future Scenarios of Climate Warming and Eutrophication
Yalan Yang, Huan Wang, Shuwen Yan, Tao Wang, Peiyu Zhang, Huan Zhang, Hongxia Wang, Lars-Anders Hansson, Jun Xu
Environmental Science & Technology.2023; 57(32): 11767. CrossRef
Autonomous calibration of EFDC for predicting chlorophyll-a using reinforcement learning and a real-time monitoring system
Seok Min Hong, Ather Abbas, Soobin Kim, Do Hyuck Kwon, Nakyung Yoon, Daeun Yun, Sanguk Lee, Yakov Pachepsky, JongCheol Pyo, Kyung Hwa Cho
Environmental Modelling & Software.2023; 168: 105805. CrossRef
Relationship between freshwater harmful algal blooms and neurodegenerative disease incidence rates in South Korea
Seungjun Lee, Boseung Choi, Sung Jae Kim, Jinnam Kim, Dayun Kang, Jiyoung Lee
Environmental Health.2022;[Epub] CrossRef
Environmental factors associated with cyanobacterial assemblages in a mesotrophic subtropical plateau lake: A focus on bloom toxicity
Lili Hu, Kun Shan, Licheng Huang, Yuanrui Li, Lei Zhao, Qichao Zhou, Lirong Song
Science of The Total Environment.2021; 777: 146052. CrossRef
High Diversity of Microcystin Chemotypes within a Summer Bloom of the Cyanobacterium Microcystis botrys
Emma Johansson, Catherine Legrand, Caroline Björnerås, Anna Godhe, Hanna Mazur-Marzec, Torbjörn Säll, Karin Rengefors
Toxins.2019; 11(12): 698. CrossRef
Harmful algal blooms and liver diseases: focusing on the areas near the four major rivers in South Korea
Seungjun Lee, Jinnam Kim, Boseung Choi, Gijung Kim, Jiyoung Lee
Journal of Environmental Science and Health, Part C.2019; 37(4): 356. CrossRef
Development of Algal Bloom Removal System Using Unmanned Aerial Vehicle and Surface Vehicle
Sungwook Jung, Hoon Cho, Donghoon Kim, Kyukwang Kim, Jong-In Han, Hyun Myung
IEEE Access.2017; 5: 22166. CrossRef

Aeration Effects on Metabolic Events during Sporulation of Bacillus thuringiensis: Mohammad H. Sarrafzadeh , Sabine Schorr-Galindo , Hyun-Joon La , Hee-Mock Oh; J. Microbiol. 2014;52(7):597-603. Published online June 28, 2014; DOI: https://doi.org/10.1007/s12275-014-3547-9

1,045 View
1 Download
9 Crossref

Abstract PDF

The metabolism of Bacillus thuringiensis during its sporulation process was investigated under different concentrations of oxygen. At the beginning of sporulation, the aeration conditions were regulated to obtain different oxygen transfer rates (OTR) in four separate fermentations, representing interrupted, limited, non-limited, and saturated oxygenation, respectively. A higher OTR resulted in a higher pH, up to about 9 in the case of saturated oxygenation, while the interrupted oxygenation resulted in a significantly acidic culture. In contrast, the absence of oxygen resulted in rapid sporangia lysis and caused acidification of the medium, indicating a distinctly different sporangia composition and different metabolism. The bacterium also showed different CO2 production rates during sporulation, although amaximum point was observed in every case.With a higher OTR, the maximal value was observed after a longer time and at a lower value (40, 26, and 13 mmol/L/h for limited, non-limited, and saturated cases, respectively). Despite the exhaustion of glucose prior to the sporulation phase, the interrupted oxygenation resulted in acetate, lactate, and citrate in the medium with a maximum concentration of 4.8, 1.3, and 5.0 g/L, respectively. Notwithstanding, while the metabolic events differed visibly in the absence of oxygen, once sporulation was triggered, it was completed, even in the case of an interrupted oxygen supply.

Citations

Citations to this article as recorded by

Delta-endotoxin production and toxicity enhancement by using vegetable oils as oxygen vectors
Túlio Alexandre Freire da Silva, Beatriz Rayana Damásio de Andrade, Lívia Santos de Freitas, Evelyn Geovanna Gomes Carvalho e Silva, Emmily Vitoria Gomes da Silva, Leandro Fragoso Lins, José de Paula Oliveira, Raquel Pedrosa Bezerra, Ana Lúcia Figueiredo
World Journal of Microbiology and Biotechnology.2026;[Epub] CrossRef
Current advances in Bacillus spp. fermentation and scale-up for the production of industrial enzymes and biosurfactants
Tatyana S Tikhomirova, Georgy D Milovidov, Sergey Y But, Vitaly A Nemashkalov
Journal of Applied Microbiology.2026;[Epub] CrossRef
The Sporulation Process of Bacillus thuringiensis as an Adaptive Response in Different Culture Systems: Analysis of the Respiratory Activity, spoIIA/cry1Ac Expression and Cell Aggregation
J. Lima-Pérez, M. López-Pérez, D. G. Pérez-Solís, J. G. Rocha-Estrada, G. Viniegra-González, O. Loera
Microbiology.2025; 94(4): 608. CrossRef
High cell density cultivation of Bacillus subtilis NCIM 2063: Modeling, optimization and a scale-up procedure
Sandra Stamenkovic-Stojanovic, Ivana Karabegovic, Bojana Danilovic, Stojan Mancic, Miodrag Lazic
Journal of the Serbian Chemical Society.2023; 88(11): 1103. CrossRef
Effect of the volumetric oxygen mass transfer coefficient on producing δ-endotoxins by Bacillus thuringiensis in culture medium based on forage palm
Túlio Alexandre Freire da Silva, Lívia Santos de Freitas, Larita Veruska José Bezerra da Silva, José Manoel Wanderley Duarte Neto, Gilvanda Ribeiro da Silva, Liane Maria de Almeida Castro Maranhão, Cynthia Araújo de Lacerda, José de Paula Oliveira, Raquel
Biocatalysis and Agricultural Biotechnology.2021; 32: 101960. CrossRef
Review on biopesticide production by Bacillus thuringiensis subsp. kurstaki since 1990: Focus on bioprocess parameters
Wafa Jallouli, Fatma Driss, Luc Fillaudeau, Souad Rouis
Process Biochemistry.2020; 98: 224. CrossRef
Solid-state fermentation of Bacillus thuringiensis var kurstaki HD-73 maintains higher biomass and spore yields as compared to submerged fermentation using the same media
Jorge Lima-Pérez, Marcos López-Pérez, Gustavo Viniegra-González, Octavio Loera
Bioprocess and Biosystems Engineering.2019; 42(9): 1527. CrossRef
Modeling of Fermentation Process of Bacillus Thuringiensis as a Sporulating Bacterium
Soroush Soleymani, Mohammad-Hossein Sarrafzadeh, Navid Mostoufi
Chemical Product and Process Modeling.2019;[Epub] CrossRef
Optimal strategies for bioremediation of nitrate-contaminated groundwater and microalgae biomass production
Fariba Rezvani, Mohammad-Hossein Sarrafzadeh, Seong-Hyun Seo, Hee-Mock Oh
Environmental Science and Pollution Research.2018; 25(27): 27471. CrossRef

Henriciella marina gen. nov., sp. nov., a Novel Member of the Family Hyphomonadaceae Isolated from the East Sea: Zhe-Xue Quan , Dan-Ning Zeng , Yi-Ping Xiao , Seong Woon Roh , Young-Do Nam , Ho-Won Chang , Jung-Hoon Yoon , Hee-Mock Oh , Jin-Woo Bae; J. Microbiol. 2009;47(2):156-161. Published online May 2, 2009; DOI: https://doi.org/10.1007/s12275-008-0290-0

897 View
0 Download
15 Crossref

Abstract PDF

A bacterial strain, designated Iso4T, was isolated from the East Sea of Korea and was subjected to a polyphasic taxonomy study including phenotypic and chemotaxonomic characteristics as well as 16S rRNA gene sequence analysis. Cells of the strain were Gram-negative, motile, non-budding, non-stalked, and strictly aerobic. Strain Iso4T grew optimally at 20°C in the presence of 1~2% (w/v) NaCl and at pH 6.9~7.6. The major respiratory quinone was Q-10 and the major cellular fatty acids were C18:1 ω7c (53.5%), C17:1 ω5c (11.7%), C17:1 ω6c (8.1%), C16:0 (7.8%), C17:0 (4.8%), C15:0 (2.9%), and C16:1 ω5c (2.2%). The DNA G+C content of strain Iso4T was 56.2 mol%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain Iso4T formed a monophyletic clade in the family Hyphomonadaceae, supported by high bootstrap value and was most closely related to the genus Hyphomonas (92~94%), a member of marine bacteria in the family. The phenotypic, genotypic, and chemotaxonomic evidences also suggest strain Iso4T represents a novel genus and species in the family Hyphomonadaceae, for which the name Henriciella gen. nov., sp. nov. is proposed. The type strain is Iso4T (=KCTC 12513T =DSM 19595T =JCM 15116T).

Citations

Citations to this article as recorded by

Judicial Opinions 103–111
David R. Arahal, Hans-Jürgen Busse, Carolee T. Bull, Henrik Christensen, Maria Chuvochina, Svetlana N. Dedysh, Pierre-Edouard Fournier, Konstantinos T. Konstantinidis, Charles T. Parker, Ramon Rosselló-Móra, Antonio Ventosa, Markus Göker
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Pseudaquidulcibacter saccharophilus gen. nov., sp. nov., a novel member of family Caulobacteraceae, isolated from a water purification facility with supplement of starch as a carbon source
Yaqi Liu, Shuyang Li, Jing Lin, Shuangyuan Liu, Hehong Wei, Jingcheng Dai, Dongru Qiu
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Alkalicaulis satelles gen. nov., sp. nov., a novel haloalkaliphile isolated from a laboratory culture cyanobacterium Geitlerinema species and proposals of Maricaulaceae fam. nov., Robiginitomaculaceae fam. nov., Maricaulales ord. nov. and Hyphomonadales o
Vadim Kevbrin, Yulia Boltyanskaya, Veronika Koziaeva, Maria Uzun, Denis Grouzdev
International Journal of Systematic and Evolutionary Microbiology.2021;[Epub] CrossRef
Physiological and genomic features of Henriciella with the description of Henriciella mobilis sp. nov.
Wen-Ting Ren, Hong Cheng, Chun-Sheng Wang, Xue-Wei Xu, Peng Zhou, Yue-Hong Wu
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
The Saltpan Microbiome Is Structured by Sediment Depth and Minimally Influenced by Variable Hydration
Eric A. Weingarten, Lauren A. Lawson, Colin R. Jackson
Microorganisms.2020; 8(4): 538. CrossRef
Vitreimonas flagellata gen. nov., sp. nov., a novel member of the family Hyphomonadaceae isolated from an activated sludge sample
Mipeshwaree Devi Asem, Nimaichand Salam, Wei Zheng, Li-Hua Liao, Xiao-Tong Zhang, Ming-Xian Han, Jian-Yu Jiao, Feng Guo, Wen-Jun Li
International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2632. CrossRef
Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria
Anton Hördt, Marina García López, Jan P. Meier-Kolthoff, Marcel Schleuning, Lisa-Maria Weinhold, Brian J. Tindall, Sabine Gronow, Nikos C. Kyrpides, Tanja Woyke, Markus Göker
Frontiers in Microbiology.2020;[Epub] CrossRef
Proposal of Henriciella barbarensis sp. nov. and Henriciella algicola sp. nov., stalked species of the genus and emendation of the genus Henriciella
Wolf-Rainer Abraham, Maira Peres de Carvalho, Thais Souto Paula da Costa Neves, Marina Torquato Memoria, Iago Toledo Tartuci, Marc Vancanneyt, John Smit, Manfred Rohde
International Journal of Systematic and Evolutionary Microbiology.2017; 67(8): 2804. CrossRef
Hyphobacterium vulgare gen. nov., sp. nov., a novel alphaproteobacterium isolated from seawater
Cong Sun, Rui-jun Wang, Yue Su, Ge-yi Fu, Zhe Zhao, Xiao-yun Yu, Chong-ya Zhang, Can Chen, Shuai-bo Han, Meng-meng Huang, Zheng-bing Lv, Min Wu
International Journal of Systematic and Evolutionary Microbiology.2017; 67(5): 1169. CrossRef
Henriciella pelagia sp. nov., isolated from seawater
Yue-Hong Wu, Hong Cheng, Ying-Yi Huo, Xiong-Bin Jin, Chun-Sheng Wang, Xue-Wei Xu
International Journal of Systematic and Evolutionary Microbiology.2017; 67(8): 3020. CrossRef
Marinicauda pacifica gen. nov., sp. nov., a prosthecate alphaproteobacterium of the family Hyphomonadaceae isolated from deep seawater
Xi-Ying Zhang, Guo-Wei Li, Chun-Sheng Wang, Yan-Jiao Zhang, Xue-Wei Xu, Hai Li, Ang Liu, Chang Liu, Bin-Bin Xie, Qi-Long Qin, Zhong Xu, Xiu-Lan Chen, Bai-Cheng Zhou, Yu-Zhong Zhang
International Journal of Systematic and Evolutionary Microbiology .2013; 63(Pt_6): 2248. CrossRef
Euryhalocaulis caribicus gen. nov., sp. nov., a New Members of the Family Hyphomonadaceae Isolated from the Caribbean Sea
Wenchao Deng, Yao Zhang, Xiabing Xie, Zihao Zhao, Yingnan Fu
Current Microbiology.2013; 66(6): 606. CrossRef
Henriciella litoralis sp. nov., isolated from a tidal flat, transfer of Maribaculum marinum Lai et al. 2009 to the genus Henriciella as Henriciella aquimarina nom. nov. and emended description of the genus Henriciella
Se Hee Lee, Jae Kuk Shim, Jeong Myeong Kim, Hyung-Kyoon Choi, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology .2011; 61(4): 722. CrossRef
Genome Sequence of Oceanicaulis sp. Strain HTCC2633, Isolated from the Western Sargasso Sea
Hyun-Myung Oh, Ilnam Kang, Kevin L. Vergin, Kiyoung Lee, Stephen J. Giovannoni, Jang-Cheon Cho
Journal of Bacteriology.2011; 193(1): 317. CrossRef
List of new names and new combinations previously effectively, but not validly, published

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY.2009; 59(9): 2129. CrossRef

Aliihoeflea aestuarii gen. nov., sp. nov., a Novel Bacterium Isolated from Tidal Flat Sediment: Seong Woon Roh , Kyoung-Ho Kim , Young-Do Nam , Ho-Won Chang , Min-Soo Kim , Kee-Sun Shin , Jung-Hoon Yoon , Hee-Mock Oh , Jin-Woo Bae; J. Microbiol. 2008;46(5):594-598. Published online October 31, 2008; DOI: https://doi.org/10.1007/s12275-008-0196-x

1,003 View
0 Download
20 Crossref

Abstract PDF

A novel Gram-negative and rod-shaped bacterium, designated N8T, was isolated from tidal flat sediment. Phylogenetic analysis based on 16S rRNA gene sequences showed that N8T strain is associated with the family Phyllobacteriaceae: two uncultured clones (98.4 and 99.8% 16S rRNA gene sequence similarity) and the genus Mesorhizobium (≤97.0%). The novel strain formed a separate clade with uncultured clones in the phylogenetic tree based on 16S rRNA gene sequences. Cellular fatty acid profiles predominately comprised C18:1 ω7c and C19:0 cyclo ω8c. The major isoprenoid quinone is ubiquinone-10 and genomic DNA G+C content is 53.4 mol%. The polyphasic taxonomic study indicates that the novel strain N8T represents a novel species of the new genus in the family Phyllobacteriaceae, named Aliihoeflea aestuarii. The type strain is N8T (= KCTC 22052T= JCM 15118T= DSM 19536T).

Citations

Citations to this article as recorded by

Draft genome sequence of Aliihoeflea sp. strain PC F10.4, isolated from the Antarctic red alga Plocamium cartilagineum
Waldo Acevedo, Fuad Mobarec, Jenifer Alvarez, Edith González-Ramos, Francisco Morera, Luis Vargas-Chacoff, Sergio Leiva Poveda, Frank J. Stewart
Microbiology Resource Announcements.2026;[Epub] CrossRef
Geochemical and microbial indicators of smectite and zeolite formation in volcanic tuff from Pohang, South Korea
Wan Hyoung Cho, Dawoon Jeong, Yoonah Bang, Geon Young Kim, Ji-Hun Ryu, Ho Young Jo
Clays and Clay Minerals.2026;[Epub] CrossRef
Ancient truncated FtsZ paralogs likely tune cell division in Hyphomicrobiales
Brody Aubry, Amelia M Randich, Bailey Hudson, Elizabet Horton, Pamela J B Brown, D Baltrus
G3: Genes, Genomes, Genetics.2026;[Epub] CrossRef
Validation List no. 226: valid publication of new names and new combinations effectively published outside the IJSEM
Aharon Oren, Markus Göker
International Journal of Systematic and Evolutionary Microbiology .2025;[Epub] CrossRef
Insight into the quality deterioration induced by microorganisms in Litopenaeus vannamei during superchilling storage
Chuang Pan, Kaiying Yang, Xianqing Yang, Haiyun Wu, Chunsheng Li, Shuxian Hao, Yongqiang Zhao, Shengjun Chen, Xiaoshan Long
Food Science and Human Wellness.2024; 13(6): 3461. CrossRef
Coal mining activities driving the changes in bacterial community
Runjie Zhang, Lianman Xu, Da Tian, Linlin Du, Fengshuo Yang
Scientific Reports.2024;[Epub] CrossRef
Low Abundant Bacteria Reflect Soil Specificity—Analysis of Bacterial Communities from Archaeological Investigation of Pre-Industrial Saline Ash Deposits of Bad Dürrenberg (Germany)
Johann Michael Köhler, Linda Ehrhardt, Peter Mike Günther, Manfred Böhme, Jialan Cao
Environments.2024; 11(3): 42. CrossRef
Phyllobacteriaceae: a family of ecologically and metabolically diverse bacteria with the potential for different applications
Saqlain Mustaq, Abdul Moin, Baishali Pandit, Bipransh Kumar Tiwary, Masrure Alam
Folia Microbiologica.2024; 69(1): 17. CrossRef
Microbial communities in carbonate precipitates from drip waters in Nerja Cave, Spain
Valme Jurado, Yolanda Del Rosal, Concepcion Jimenez de Cisneros, Cristina Liñan, Tamara Martin-Pozas, Jose Luis Gonzalez-Pimentel, Bernardo Hermosin, Cesareo Saiz-Jimenez
PeerJ.2022; 10: e13399. CrossRef
Description of Polaribacter batillariae sp. nov., Polaribacter cellanae sp. nov., and Polaribacter pectinis sp. nov., novel bacteria isolated from the gut of three types of South Korean shellfish
Su-Won Jeong, Jeong Eun Han, June-Young Lee, Ji-Ho Yoo, Do-Yeon Kim, In Chul Jeong, Jee-Won Choi, Yun-Seok Jeong, Jae-Yun Lee, So-Yeon Lee, Euon Jung Tak, Hojun Sung, Hyun Sik Kim, Pil Soo Kim, Dong-Wook Hyun, Jin-Woo Bae
Journal of Microbiology.2022; 60(6): 576. CrossRef
Real-Time Culture-Independent Microbial Profiling Onboard the International Space Station Using Nanopore Sequencing
Sarah Stahl-Rommel, Miten Jain, Hang N. Nguyen, Richard R. Arnold, Serena M. Aunon-Chancellor, Gretta Marie Sharp, Christian L. Castro, Kristen K. John, Sissel Juul, Daniel J. Turner, David Stoddart, Benedict Paten, Mark Akeson, Aaron S. Burton, Sarah L.
Genes.2021; 12(1): 106. CrossRef
Oceaniradius stylonematis gen. nov., sp. nov., isolated from a red alga, Stylonema cornu-cervi
Sang Eun Jeong, Kyung Hyun Kim, Duckhyun Lhee, Hwan Su Yoon, Zhe-Xue Quan, En-Young Lee, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology .2019; 69(7): 1967. CrossRef
Zhengella mangrovi gen. nov., sp. nov., a novel member of family Phyllobacteriaceae isolated from mangrove sediment
Hu Liao, Yuqian Li, Xiaolan Lin, Qiliang Lai, Yun Tian
International Journal of Systematic and Evolutionary Microbiology.2018; 68(9): 2819. CrossRef
Roseitalea porphyridii gen. nov., sp. nov., isolated from a red alga, and reclassification of Hoeflea suaedae Chung et al. 2013 as Pseudohoeflea suaedae gen. nov., comb. nov.
Jong Woo Hyeon, Sang Eun Jeong, Kyunghwa Baek, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology .2017; 67(2): 362. CrossRef
Oricola cellulosilytica gen. nov., sp. nov., a cellulose-degrading bacterium of the family Phyllobacteriaceae isolated from surface seashore water, and emended descriptions of Mesorhizobium loti and Phyllobacterium myrsinacearum
Asif Hameed, Mariyam Shahina, Wei-An Lai, Shih-Yao Lin, Li-Sen Young, You-Cheng Liu, Yi-Han Hsu, Chiu-Chung Young
Antonie van Leeuwenhoek.2015; 107(3): 759. CrossRef
Thalassocola ureilytica gen. nov., sp. nov., of the family Phyllobacteriaceae isolated from seawater
Shih-Yao Lin, Asif Hameed, Chiu-Chung Young, You-Cheng Liu, Yi-Han Hsu, Wei-Ching Chung, Li-Sen Young
International Journal of Systematic and Evolutionary Microbiology.2015; 65(Pt_11): 4100. CrossRef
Characterization of the arsenite oxidizer Aliihoeflea sp. strain 2WW and its potential application in the removal of arsenic from groundwater in combination with Pf-ferritin
Anna Corsini, Milena Colombo, Gerard Muyzer, Lucia Cavalca
Antonie van Leeuwenhoek.2015; 108(3): 673. CrossRef
A comprehensive study on volatile fatty acids production from rice straw coupled with microbial community analysis
Gwon Woo Park, Charles Seo, Kwonsu Jung, Ho Nam Chang, Woong Kim, Yeu-Chun Kim
Bioprocess and Biosystems Engineering.2015; 38(6): 1157. CrossRef
A lytic bacterium's potential application in biofuel production through directly lysing the diatom Phaeodactylum tricornutum cell
Zhangran Chen, Bangzhou Zhang, Jingyan Zhang, Xueqian Lei, Huajun Zhang, Yi Li, Luxi Yang, Wei Zheng, Yun Tian, Lisa A. Boughner, Hong Xu, Tianling Zheng
Algal Research.2015; 12: 197. CrossRef
Draft Genome Sequence of the Arsenite-Oxidizing Strain Aliihoeflea sp. 2WW, Isolated from Arsenic-Contaminated Groundwater
Lucia Cavalca, Anna Corsini, Vincenza Andreoni, Gerard Muyzer
Genome Announcements.2013;[Epub] CrossRef

Luteimonas aestuarii sp. nov., Isolated from Tidal Flat Sediment: Seong Woon Roh , Kyoung-Ho Kim , Young-Do Nam , Ho-Won Chang , Min-Soo Kim , Jung-Hoon Yoon , Hee-Mock Oh , Jin-Woo Bae; J. Microbiol. 2008;46(5):525-529. Published online October 31, 2008; DOI: https://doi.org/10.1007/s12275-008-0189-9

834 View
2 Download
39 Crossref

Abstract PDF

A novel bacterium B9T was isolated from tidal flat sediment. Its morphology, physiology, biochemical features, and 16S rRNA gene sequence were characterized. Colonies of this strain are yellow and the cells are Gram-negative, rod-shaped, and do not require NaCl for growth. The 16S rRNA gene sequence similarity indicated that strain B9T is associated with the genus Lysobacter (≤ 97.2%), Xanthomonas (≤ 96.8%), Pseudomonas (≤ 96.7%), and Luteimonas (≤ 96.0%). However, within the phylogenetic tree, this novel strain shares a branching point with the species Luteimonas composti CC-YY255T (96.0%). The DNA-DNA hybridization experiments showed a DNA-DNA homology of 23.0% between strain B9T and Luteimonas mephitis B1953/27.1T. The G+C content of genomic DNA of the type strain is 64.7 mol% (SD, 1.1). The predominant fatty acids are iso-C11:0, iso-C15:0, iso-C16:0, iso-C17:0, iso-C17:1 ω9c, and iso-C11:0 3-OH. Combined analysis of the 16S rRNA gene sequences, fatty acid profile, and results from physiological and biochemical tests indicated that there is genotypic and phenotypic differentiation of the isolate from other Luteimonas species. For these reasons, strain B9T was proposed as a novel species, named Luteimonas aestuarii. The type strain of the new species is B9T (= KCTC 22048T, DSM 19680T).

Citations

Citations to this article as recorded by

Luteimonas campi sp. nov., a novel species of Luteimonas isolated from campus soil
Yihan Xu, Xinran Du, Qi Chen, Jianing Wang, Yue-zhong Li
International Journal of Systematic and Evolutionary Microbiology .2026;[Epub] CrossRef
Luteimonas salinilitoris sp. nov., isolated from the shore soil of saline lake in Tibet of China
Xuan Zhang, You-Jun Liao, Zi-Xuan Liu, Rui Wang, Hong-Can Liu, Yan-Yan Zheng, Yu-Guang Zhou, Ya-Jing Yu, Lu Xue, Ai-Hua Li
International Journal of Systematic and Evolutionary Microbiology .2025;[Epub] CrossRef
On-site Oxford Nanopore® MinION™ whole genome sequencing analysis to understand the microbiome, resistome and metabolic features of subaerial biofilms on stone monuments
Fabiana Soares, Lídia Catarino, Conceição Egas, João Trovão
Total Environment Microbiology.2025; 1(2): 100011. CrossRef
Familial Reclassification Within Order Lysobacterales and Proposal of Four Novel Species
Tengfei Ma, Haijiao Liu, Yafei Chen, Juan Liu, Chungen Piao, Han Xue, Risheng Xu, Yong Li
Microorganisms.2025; 13(6): 1212. CrossRef
Three novel Luteimonas species from a root and rhizosphere soil of Kalidium cuspidatum: Luteimonas endophytica sp. nov., Luteimonas rhizosphaericola sp. nov. and Luteimonas kalidii sp. nov.
Hua-Mei Wei, Lian Xu, Xu Zhang, Ji-Quan Sun
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Horizontal gene transfer in plant microbiomes: integrons as hotspots for cross-species gene exchange
Timothy M. Ghaly, Michael R. Gillings, Vaheesan Rajabal, Ian T. Paulsen, Sasha G. Tetu
Frontiers in Microbiology.2024;[Epub] CrossRef
Description of Polaribacter batillariae sp. nov., Polaribacter cellanae sp. nov., and Polaribacter pectinis sp. nov., novel bacteria isolated from the gut of three types of South Korean shellfish
Su-Won Jeong, Jeong Eun Han, June-Young Lee, Ji-Ho Yoo, Do-Yeon Kim, In Chul Jeong, Jee-Won Choi, Yun-Seok Jeong, Jae-Yun Lee, So-Yeon Lee, Euon Jung Tak, Hojun Sung, Hyun Sik Kim, Pil Soo Kim, Dong-Wook Hyun, Jin-Woo Bae
Journal of Microbiology.2022; 60(6): 576. CrossRef
Physiological and genomic characterisation of Luteimonas fraxinea sp. nov., a bacterial species associated with trees tolerant to ash dieback
Kristina Ulrich, Regina Becker, Undine Behrendt, Michael Kube, Volker Schneck, Andreas Ulrich
Systematic and Applied Microbiology.2022; 45(4): 126333. CrossRef
Description and genome analysis of Luteimonas viscosa sp. nov., a novel bacterium isolated from soil of a sunflower field
Ya Chen, Ying Zhang, Di Xin, Xiaonan Luo, Huancheng Pang, Yuyi Li, Jianli Zhang
Antonie van Leeuwenhoek.2022; 115(6): 749. CrossRef
Cultured and uncultured microbial community associated with biogas production in anaerobic digestion processes
Júlia Ronzella Ottoni, Suzan Prado Fernandes Bernal, Tiago Joelzer Marteres, Franciele Natividade Luiz, Viviane Piccin dos Santos, Ângelo Gabriel Mari, Juliana Gaio Somer, Valéria Maia de Oliveira, Michel Rodrigo Zambrano Passarini
Archives of Microbiology.2022;[Epub] CrossRef
Luteimonas saliphila sp. nov. and Luteimonas salinisoli sp. nov., two novel strains isolated from saline soils
Ji-Quan Sun, Xiao-Xian Huang, Lian Xu, Hua-Mei Wei
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Luteimonas deserti sp. nov., a novel strain isolated from desert soil
Xiao-Xian Huang, Jia Shang, Lian Xu, Rui Yang, Ji-Quan Sun
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Exploration of heterotrophic bacterial diversity in sediments of the mud volcano in the Andaman and Nicobar Islands, India
Sanjib Kumar Manna, Basanta Kumar Das, Bimal Prasanna Mohanty, Chinmay Bandopadhyay, Nilemesh Das, Raju Baitha, Archan Kanti Das
Environmental Nanotechnology, Monitoring & Management.2021; 16: 100465. CrossRef
Luteimonas gilva sp. nov., isolated from farmland soil
Luo Xiong, Lijin An, Yuanyuan Zong, Mengjie Wang, Gejiao Wang, Mingshun Li
International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3462. CrossRef
Luteimonas yindakuii sp. nov. isolated from the leaves of Dandelion (Taraxacum officinale) on the Qinghai-Tibetan Plateau
Sihui Zhang, Xiaoxia Wang, Jing Yang, Shan Lu, Xin-He Lai, Dong Jin, Ji Pu, Junqin Li, Yuyuan Huang, Gui Zhang, Wentao Zhu, Ying Huang, Zhi Tian, Juan Zhou, Kui Dong, Wenjing Lei, Zhihong Ren, Suping Wang, Jianguo Xu
International Journal of Systematic and Evolutionary Microbiology .2020; 70(2): 1007. CrossRef
Jeotgalibaca ciconiae sp. nov., isolated from the faeces of an Oriental stork
So-Yeon Lee, Woorim Kang, Pil Soo Kim, Hyun Sik Kim, Hojun Sung, Na-Ri Shin, Ji-Hyun Yun, Jae-Yun Lee, June-Young Lee, Mi-Ja Jung, Yun-Seok Jeong, Euon Jung Tak, Jeong Eun Han, Dong-Wook Hyun, Myung-Suk Kang, Ki-Eun Lee, Byoung-Hee Lee, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3247. CrossRef
Luteimonas granuli sp. nov., Isolated from Granules of the Wastewater Treatment Plant
Muhammad Zubair Siddiqi, Jun Mo Yeon, Hanna Choi, Jae Hag Lee, Sang Yong Kim, Ji-Hyang Wee, Wan Taek Im
Current Microbiology.2020; 77(9): 2002. CrossRef
Luteimonas chenhongjianii, a novel species isolated from rectal contents of Tibetan Plateau pika (Ochotona curzoniae)
Gui Zhang, Xin-He Lai, Jing Yang, Dong Jin, Ji Pu, Yanwen Xiong, Caixin Yang, Kui Dong, Ying Huang, Xuelian Luo, Shan Lu, Jianguo Xu
International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3186. CrossRef
Undibacterium piscinae sp. nov., isolated from Korean shiner intestine
So-Yeon Lee, Woorim Kang, Pil Soo Kim, Hyun Sik Kim, Hojun Sung, Na-Ri Shin, Tae Woong Whon, Ji-Hyun Yun, Jae-Yun Lee, June-Young Lee, Mi-Ja Jung, Yun-Seok Jeong, Euon Jung Tak, Jeong Eun Han, Dong-Wook Hyun, Myung-Suk Kang, Ki-Eun Lee, Byoung-Hee Lee, Ji
International Journal of Systematic and Evolutionary Microbiology.2019; 69(10): 3148. CrossRef
Proposal of Lysobacter pythonis sp. nov. isolated from royal pythons (Python regius)
Hans-Jürgen Busse, Christopher Huptas, Sandra Baumgardt, Igor Loncaric, Joachim Spergser, Siegfried Scherer, Mareike Wenning, Peter Kämpfer
Systematic and Applied Microbiology.2019; 42(3): 326. CrossRef
Extreme Geochemical Conditions and Dispersal Limitation Retard Primary Succession of Microbial Communities in Gold Tailings
Talitha C. Santini, Maija Raudsepp, Jessica Hamilton, Jasmine Nunn
Frontiers in Microbiology.2018;[Epub] CrossRef
Luteimonas rhizosphaerae sp. nov., isolated from the rhizosphere of Triticum aestivum L.
Guo-Yan Zhao, Fei Shao, Mi Zhang, Xue-Jie Zhang, Jing-Yuan Wang, Shou-Jin Fan, Mei-Xue Dai
International Journal of Systematic and Evolutionary Microbiology.2018; 68(4): 1197. CrossRef
Luteimonas padinae sp. nov., an epiphytic bacterium isolated from an intertidal macroalga
Ashish Verma, Anup Kumar Ojha, Parveen Kumari, Shiva S. Sundharam, Shanmugam Mayilraj, Srinivasan Krishnamurthi
International Journal of Systematic and Evolutionary Microbiology.2016; 66(12): 5444. CrossRef
Draft Genome Sequence of a Novel Luteimonas sp. Strain from Coral Mucus, Hawai‘i
Xuehua Wan, James M. Miller, Sonia J. Rowley, Shaobin Hou, Stuart P. Donachie
Genome Announcements.2016;[Epub] CrossRef
Luteimonas terrae sp. nov., isolated from rhizosphere soil of Radix ophiopogonis
Hien T. T. Ngo, Chang Shik Yin
International Journal of Systematic and Evolutionary Microbiology.2016; 66(5): 1920. CrossRef
Luteimonas arsenica sp. nov., an arsenic-tolerant bacterium isolated from arsenic-contaminated soil
Yao Mu, Yunfan Pan, Wanxia Shi, Lan Liu, Zhao Jiang, Xuesong Luo, Xian-Chun Zeng, Wen-Jun Li
International Journal of Systematic and Evolutionary Microbiology .2016; 66(6): 2291. CrossRef
Luteimonas tolerans sp. nov., isolated from hexachlorocyclohexane-contaminated soil
Pooja Rani, Udita Mukherjee, Helianthous Verma, Komal Kamra, Rup Lal
International Journal of Systematic and Evolutionary Microbiology.2016; 66(4): 1851. CrossRef
Luteimonas notoginsengisoli sp. nov., isolated from rhizosphere
Juan Cheng, Meng-Yue Zhang, Wei-Xun Wang, Deene Manikprabhu, Nimaichand Salam, Tian-Yuan Zhang, Ying-Ying Wu, Wen-Jun Li, Yi-Xuan Zhang
International Journal of Systematic and Evolutionary Microbiology .2016; 66(2): 946. CrossRef
Bacterial Diversity Associated with Wild Caught Anopheles Mosquitoes from Dak Nong Province, Vietnam Using Culture and DNA Fingerprint
Chung Thuy Ngo, Fabien Aujoulat, Francisco Veas, Estelle Jumas-Bilak, Sylvie Manguin, Luciano A. Moreira
PLOS ONE.2015; 10(3): e0118634. CrossRef
Luteimonas soli sp. nov., isolated from farmland soil
Xiang Wang, Hong-Xing Yang, Ying-Kun Zhang, Shi-Jun Zhu, Xiao-Wei Liu, Hao Zhang, Chen-Fei Zhang, Chao-Ran Zhao, Gang Hu, Qing Hong
International Journal of Systematic and Evolutionary Microbiology .2015; 65(Pt_12): 4809. CrossRef
Luteimonas dalianensis sp. nov., an obligate marine bacterium isolated from seawater
Yanjuan Xin, Xupeng Cao, Peichun Wu, Song Xue
Journal of Microbiology.2014; 52(9): 729. CrossRef
Luteimonas abyssi sp. nov., isolated from deep-sea sediment
Xiaoyang Fan, Tong Yu, Zhao Li, Xiao-Hua Zhang
International Journal of Systematic and Evolutionary Microbiology .2014; 64(Pt_2): 668. CrossRef
Luteimonas huabeiensis sp. nov., isolated from stratum water
Gang Wu, Yang Liu, Qing Li, Huijing Du, Jing You, Hong Li, Congyu Ke, Xin Zhang, Jiliang Yu, Ting Zhao
International Journal of Systematic and Evolutionary Microbiology .2013; 63(Pt_9): 3352. CrossRef
Diverse cellulolytic bacteria isolated from the high humus, alkaline-saline chinampa soils
Yanelly Trujillo-Cabrera, Alejandro Ponce-Mendoza, María Soledad Vásquez-Murrieta, Flor N. Rivera-Orduña, En Tao Wang
Annals of Microbiology.2013; 63(2): 779. CrossRef
Luteimonas vadosa sp. nov., isolated from seashore sediment
Lyudmila A. Romanenko, Naoto Tanaka, Vassilii I. Svetashev, Valeriya V. Kurilenko, Valery V. Mikhailov
International Journal of Systematic and Evolutionary Microbiology.2013; 63(Pt_4): 1261. CrossRef
Rehaibacterium terrae gen. nov., sp. nov. isolated from a geothermally heated soil sample
Tian-Tian Yu, Ji-Cheng Yao, Yi-Rui Yin, Lei Dong, Ruo-Fei Liu, Hong Ming, En-Min Zhou, Wen-Jun Li
International Journal of Systematic and Evolutionary Microbiology .2013; 63(Pt_11): 4058. CrossRef
Luteimonas cucumeris sp. nov., isolated a from cucumber leaf
Zhan-Bin Sun, Hui Zhang, Xing-Fang Yuan, Yin-Xian Wang, Dong-Mei Feng, Yi-Hua Wang, Yong-Jun Feng
International Journal of Systematic and Evolutionary Microbiology .2012; 62(Pt_12): 2916. CrossRef
Luteimonas lutimaris sp. nov., isolated from a tidal flat
Youn-Je Park, Moon Su Park, Seung Hyeon Lee, Woojun Park, Kangseok Lee, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology .2011; 61(11): 2729. CrossRef
List of new names and new combinations previously effectively, but not validly, published

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY.2009; 59(5): 923. CrossRef

Arthrobacter soli sp. nov., a Novel Bacterium Isolated from Wastewater Reservoir Sediment: Seong Woon Roh , Youlboong Sung , Young-Do Nam , Ho-Won Chang , Kyoung-Ho Kim , Jung-Hoon Yoon , Che Ok Jeon , Hee-Mock Oh , Jin-Woo Bae; J. Microbiol. 2008;46(1):40-44.; DOI: https://doi.org/10.1007/s12275-007-0239-8

1,345 View
1 Download
74 Crossref

Abstract PDF

A novel Gram-positive bacterium, designated SYB2T, was isolated from wastewater reservoir sediment, and a polyphasic taxonomic study was conducted based on its morphological, physiological, and biochemical features, as well as the analysis of its 16S rRNA gene sequence. During the phylogenetic analysis of the strain SYB2T, results of a 16S rRNA gene sequence analysis placed this bacterium in the genus Arthrobacter within the family Micrococcaceae. SYB2T and Arthrobacter protophormiae ATCC 19271T, the most closely related species, both exhibited a 16S rRNA gene sequence similarity of 98.99%. The genomic DNA G+C content of the novel strain was found to be 62.0 mol%. The predominant fatty acid composition was anteiso-C15:0, anteiso-C17:0, iso-C16:0, and iso-C15:0. Analysis of 16S rRNA gene sequences and DNA-DNA relatedness, as well as physiological and biochemical tests, showed genotypic and phenotypic differences between strain SYB2T and other Arthrobacter species. The type strain of the novel species was identified as SYB2T (= KCTC 19291T= DSM 19449T).

Citations

Citations to this article as recorded by

Are Autochthonous Bacteria of Desert Root Environments Capable of Increasing Crop Tolerance to Saline Stress?
Vincenzo Aurilia, Alessandra Ruggiero, Cuihua Huang, Jing Pan, Xian Xue, Anna Tedeschi
Plants.2026; 15(6): 892. CrossRef
Dependence of the Adaptation of the Strain Glutamicibacter sp. SMB32 to a High Salinity Environment Depending on Growth Stage and Temperature
L. N. Anan’ina, A. A. Gorbunov, E. A. Shestakova
Moscow University Biological Sciences Bulletin.2025; 80(1): 14. CrossRef
Characterization of natural therapeutic compounds producing novel bacterial strains isolated from Hyderabad, India
Anushka Bhrdwaj, Anuraj Nayarisseri, Sanjeev Kumar Singh
Scientific Reports.2025;[Epub] CrossRef
Dependence of the adaptation of the strain Glutamicibacter sp. SMB32 to high salinity environment depending on growth stage and temperature
L. N. Anan’ina, A. A. Gorbunov, E. A. Shestakova
Vestnik Moskovskogo universiteta. Seria 16. Biologia.2025; 80(№1, 2025): 18. CrossRef
Intestinal microbial diversity in domestic honey bees and evaluation of their probiotic properties
Eui-Sang Cho, Hyun Jee Kim, Jeong Hyeon Lee, Chi Young Hwang, Inonge Noni Siziya, Hyung Wook Kwon, Myung-Ji Seo
Journal of Apicultural Research.2025; 64(3): 830. CrossRef
Investigation of airborne bacteria in wood ear mushroom cultivation houses
Soo Young Chi, Seong Hwan Kim, Won Ho Lee
Journal of Odor and Indoor Environment.2024; 23(2): 124. CrossRef
Genomic and Physiological Characterization of Metabacillus flavus sp. nov., a Novel Carotenoid-Producing Bacilli Isolated from Korean Marine Mud
Chi Young Hwang, Eui-Sang Cho, Deok Jun Yoon, In-Tae Cha, Dong-Hyun Jung, Young-Do Nam, So-Lim Park, Seong-Il Lim, Myung-Ji Seo
Microorganisms.2022; 10(5): 979. CrossRef
Arthrobacter wenxiniae sp. nov., a novel plant growth-promoting rhizobacteria species harbouring a carotenoids biosynthetic gene cluster
Yu-chen Sun, Pengbo Sun, Jing Xue, Yunpeng Du, Hui Yan, Li-wei Wang, Xin-xin Yi, Jian-guang Sun, Xiuhai Zhang, Jun-lian Gao
Antonie van Leeuwenhoek.2022; 115(3): 353. CrossRef
The Role of the Microbiota in Regeneration-Associated Processes
Lymarie M. Díaz-Díaz, Andrea Rodríguez-Villafañe, José E. García-Arrarás
Frontiers in Cell and Developmental Biology.2022;[Epub] CrossRef
Paenibacillus mellifer sp. nov., isolated from gut of the honey bee Apis mellifera
Eui-Sang Cho, Chi Young Hwang, Hyung Wook Kwon, Myung-Ji Seo
Archives of Microbiology.2022;[Epub] CrossRef
Fibrivirga algicola gen. nov., sp. nov., an algicidal bacterium isolated from a freshwater river
Sanghwa Park, Ja Young Cho, Dong-Hyun Jung, Seok Won Jang, Jung Hye Eom, Seung Won Nam, Dae Ryul Kwon, Jaewon Ryu, Keug Tae Kim
Antonie van Leeuwenhoek.2022; 115(7): 899. CrossRef
Limnovirga soli gen. nov., sp. nov., isolated from river sediment
Kyung June Yim, Dong-Hyun Jung, Seok Won Jang, Sanghwa Park
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Halobellus ruber sp. nov., a deep red-pigmented extremely halophilic archaeon isolated from a Korean solar saltern
Chi Young Hwang, Eui-Sang Cho, Deok Jun Yoon, Myung-Ji Seo
Antonie van Leeuwenhoek.2021; 114(7): 997. CrossRef
Glutamicibacter mishrai sp. nov., isolated from the coral Favia veroni from Andaman Sea
Lipika Das, Sushanta Deb, Subrata K. Das
Archives of Microbiology.2020; 202(4): 733. CrossRef
Hymenobacter lutimineralis sp. nov., belonging to the family Hymenobacteraceae, isolated from zeolite
Eui-Sang Cho, So-Lim Park, Young-Do Nam, Seong-Il Lim, Dae-Young Kim, Dong-Hyun Jung, Jae-Hwan Kim, Myung-Ji Seo
Antonie van Leeuwenhoek.2020; 113(7): 947. CrossRef
Roseovarius faecimaris sp. nov., isolated from a tidal flat
In-Tae Cha, Eui-Sang Cho, Hak-Jong Choi, Seong Woon Roh, Myung-Ji Seo
International Journal of Systematic and Evolutionary Microbiology.2019; 69(5): 1465. CrossRef
Inhibitory effect of Bacillus velezensis on biofilm formation by Streptococcus mutans
Yesol Yoo, Dong-Ho Seo, Hyunjin Lee, Eui-Sang Cho, Nho-Eul Song, Tea Gyu Nam, Young-Do Nam, Myung-Ji Seo
Journal of Biotechnology.2019; 298: 57. CrossRef
Novel haloarchaeon Natrinema thermophila having the highest growth temperature among haloarchaea with a large genome size
Yeon Bee Kim, Joon Yong Kim, Hye Seon Song, Changsu Lee, Seung Woo Ahn, Se Hee Lee, Min Young Jung, Jin-Kyu Rhee, Juseok Kim, Dong-Wook Hyun, Jin-Woo Bae, Seong Woon Roh
Scientific Reports.2018;[Epub] CrossRef
Zunongwangia flava sp. nov., belonging to the family Flavobacteriaceae, isolated from Salicornia europaea
Eui-Sang Cho, In-Tae Cha, Hak-Jong Choi, Seong Woon Roh, Young-Do Nam, Sung Man Seo, Myung-Ji Seo
Journal of Microbiology.2018; 56(12): 868. CrossRef
Flavimarina flava sp. nov., isolated from Salicornia herbacea
Eui-Sang Cho, In-Tae Cha, Jung-Min Park, Hak-Jong Choi, Jong Hun Lee, Seong Woon Roh, Eun-Ah Cho, Mee-Hyang Kweon, Young-Do Nam, Myung-Ji Seo
International Journal of Systematic and Evolutionary Microbiology.2017; 67(10): 4240. CrossRef
Paenibacillus arcticus sp. nov., isolated from Arctic soil
In-Tae Cha, Eui-Sang Cho, Yesol Yoo, Yoon Ji Seok, Inhye Park, Hee Seon Lim, Jung-Min Park, Seong Woon Roh, Young-Do Nam, Hak-Jong Choi, Yoo Kyung Lee, Myung-Ji Seo
International Journal of Systematic and Evolutionary Microbiology.2017; 67(11): 4385. CrossRef
Nioella aestuarii sp. nov., of the family Rhodobacteraceae, isolated from tidal flat
In-Tae Cha, Eui-Sang Cho, Jung-Min Park, Jung-Yong Yeh, Myung-Ji Seo
International Journal of Systematic and Evolutionary Microbiology.2017; 67(12): 5205. CrossRef
Aquimarina versatilis sp. nov., isolated from seashore sand, and emended description of the genus Aquimarina
Jae Kook Lee, In-Tae Cha, Minwook Kim, Bong-geun Choi, Hye Seon Song, Joon Yong Kim, Seong Woon Roh, Sung-Jae Lee
International Journal of Systematic and Evolutionary Microbiology.2017; 67(2): 411. CrossRef
Molecular Analysis of Arthrobacter Myovirus vB_ArtM-ArV1: We Blame It on the Tail
Laura Kaliniene, Eugenijus Šimoliūnas, Lidija Truncaitė, Aurelija Zajančkauskaitė, Juozas Nainys, Algirdas Kaupinis, Mindaugas Valius, Rolandas Meškys, Rozanne M. Sandri-Goldin
Journal of Virology.2017;[Epub] CrossRef
Thalassobius litorarius sp. nov., isolated from a tidal flat
Inhye Park, In-Tae Cha, Myung-Ji Seo
International Journal of Systematic and Evolutionary Microbiology.2016; 66(4): 1666. CrossRef
Genome Sequence of Arthrobacter antarcticus Strain W2, Isolated from a Slaughterhouse
Jakob Herschend, Prem K. Raghupathi, Henriette L. Røder, Søren J. Sørensen, Mette Burmølle
Genome Announcements.2016;[Epub] CrossRef
Detailed analyses of the bacterial populations in processed cocoa beans of different geographic origin, subject to varied fermentation conditions
Cristian Bortolini, Vania Patrone, Edoardo Puglisi, Lorenzo Morelli
International Journal of Food Microbiology.2016; 236: 98. CrossRef
Review of the taxonomy of the genus Arthrobacter, emendation of the genus Arthrobacter sensu lato, proposal to reclassify selected species of the genus Arthrobacter in the novel genera Glutamicibacter gen. nov., Paeniglutamicibacter gen. nov., Pseudogluta
Hans-Jürgen Busse
International Journal of Systematic and Evolutionary Microbiology.2016; 66(1): 9. CrossRef
Halostella salina gen. nov., sp. nov., an extremely halophilic archaeon isolated from solar salt
Hye Seon Song, In-Tae Cha, Jin-Kyu Rhee, Kyung June Yim, Ah Yoon Kim, Jong-Soon Choi, Su Jeong Baek, Myung-Ji Seo, Soo-Je Park, Young-Do Nam, Seong Woon Roh
International Journal of Systematic and Evolutionary Microbiology.2016; 66(7): 2740. CrossRef
Arthrobacter echini sp. nov., isolated from the gut of a purple sea urchin, Heliocidaris crassispina
June-Young Lee, Dong-Wook Hyun, Pil Soo Kim, Hyun Sik Kim, Na-Ri Shin, Ji-Hyun Yun, Mi-Ja Jung, Min-Soo Kim, Tae Woong Whon, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology.2016; 66(4): 1887. CrossRef
Pseudoruegeria aestuarii sp. nov., of the family Rhodobacteraceae, isolated from a tidal flat
In-Tae Cha, Inhye Park, Hae-Won Lee, Hyunjin Lee, Jung-Min Park, Seong Woon Roh, Hak-Jong Choi, Young-Do Nam, Yoo Kyung Lee, Myung-Ji Seo
International Journal of Systematic and Evolutionary Microbiology.2016; 66(8): 3125. CrossRef
Vulcanisaeta thermophila sp. nov., a hyperthermophilic and acidophilic crenarchaeon isolated from solfataric soil
Kyung June Yim, In-Tae Cha, Jin-Kyu Rhee, Hye Seon Song, Dong-Wook Hyun, Hae-Won Lee, Daekyung Kim, Kil-Nam Kim, Young-Do Nam, Myung-Ji Seo, Jin-Woo Bae, Seong Woon Roh
International Journal of Systematic and Evolutionary Microbiology.2015; 65(Pt_1): 201. CrossRef
Halolamina rubra sp. nov., a haloarchaeon isolated from non-purified solar salt
In-Tae Cha, Kyung June Yim, Hye Seon Song, Hae-Won Lee, Dong-Wook Hyun, Kil-Nam Kim, Jong-Soon Choi, Daekyung Kim, Sung-Jae Lee, Myung-Ji Seo, Hak-Jong Choi, Jin-Woo Bae, Sung-Keun Rhee, Seong Woon Roh, Young-Do Nam
Antonie van Leeuwenhoek.2014; 105(5): 907. CrossRef
Citrimicrobium luteum gen. nov., sp. nov., aerobic anoxygenic phototrophic bacterium isolated from the gut of a sea cucumber Stichopus japonicus
Hong-Joo Jung, In-Tae Cha, Kyung June Yim, Hye Seon Song, Kichul Cho, Daekyung Kim, Hae-Won Lee, Jae Kook Lee, Myung-Ji Seo, Seong Woon Roh, Sung-Jae Lee
Journal of Microbiology.2014; 52(10): 819. CrossRef
Halobellus rufus sp. nov., an extremely halophilic archaeon isolated from non-purified solar salt
In-Tae Cha, Kyung June Yim, Hye Seon Song, Hae-Won Lee, Dong-Wook Hyun, Kil-Nam Kim, Myung-Ji Seo, Daekyung Kim, Jong-Soon Choi, Sung-Jae Lee, Jin-Woo Bae, Sung-Keun Rhee, Hak-Jong Choi, Jin-Kyu Rhee, Young-Do Nam, Seong Woon Roh
Antonie van Leeuwenhoek.2014; 105(5): 925. CrossRef
Isolation and Characterization of vB_ArS-ArV2 – First Arthrobacter sp. Infecting Bacteriophage with Completely Sequenced Genome
Eugenijus Šimoliūnas, Laura Kaliniene, Miroslav Stasilo, Lidija Truncaitė, Aurelija Zajančkauskaitė, Juozas Staniulis, Juozas Nainys, Algirdas Kaupinis, Mindaugas Valius, Rolandas Meškys, Adam Driks
PLoS ONE.2014; 9(10): e111230. CrossRef
Halorubrum halophilum sp. nov., an extremely halophilic archaeon isolated from a salt-fermented seafood
Kyung June Yim, In-Tae Cha, Hae-Won Lee, Hye Seon Song, Kil-Nam Kim, Sung-Jae Lee, Young-Do Nam, Dong-Wook Hyun, Jin-Woo Bae, Sung-Keun Rhee, Myung-Ji Seo, Jong-Soon Choi, Hak-Jong Choi, Seong Woon Roh, Daekyung Kim
Antonie van Leeuwenhoek.2014; 105(3): 603. CrossRef
Halococcus sediminicola sp. nov., an extremely halophilic archaeon isolated from a marine sediment
Kyung June Yim, In-Tae Cha, Tae Woong Whon, Hae-Won Lee, Hye Seon Song, Kil-Nam Kim, Young-Do Nam, Sung-Jae Lee, Jin-Woo Bae, Sung-Keun Rhee, Jong-Soon Choi, Myung-Ji Seo, Seong Woon Roh, Daekyung Kim
Antonie van Leeuwenhoek.2014; 105(1): 73. CrossRef
Halapricum salinum gen. nov., sp. nov., an extremely halophilic archaeon isolated from non-purified solar salt
Hye Seon Song, In-Tae Cha, Kyung June Yim, Hae-Won Lee, Dong-Wook Hyun, Sung-Jae Lee, Sung-Keun Rhee, Kil-Nam Kim, Daekyung Kim, Jong-Soon Choi, Myung-Ji Seo, Hak-Jong Choi, Jin-Woo Bae, Jin-Kyu Rhee, Young-Do Nam, Seong Woon Roh
Antonie van Leeuwenhoek.2014; 105(5): 979. CrossRef
Draft Genome Sequence of Arthrobacter crystallopoietes Strain BAB-32, Revealing Genes for Bioremediation
M. N. Joshi, A. S. Pandit, A. Sharma, R. V. Pandya, S. M. Desai, A. K. Saxena, S. B. Bagatharia
Genome Announcements.2013;[Epub] CrossRef
Lactobacillus kimchiensis sp. nov., isolated from a fermented food
Jandi Kim, Joon Yong Kim, Min-Soo Kim, Seong Woon Roh, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology .2013; 63(Pt_4): 1355. CrossRef
Paenibacillus marinisediminis sp. nov., a bacterium isolated from marine sediment
Hae-Won Lee, Seong Woon Roh, Kyung June Yim, Na-Ri Shin, Jina Lee, Tae Woong Whon, Joon Yong Kim, Dong-Wook Hyun, Daekyung Kim, Jin-Woo Bae
Journal of Microbiology.2013; 51(3): 312. CrossRef
Gillisia marina sp. nov., from seashore sand, and emended description of the genus Gillisia
Seong Woon Roh, Myunglip Lee, Hae-Won Lee, Kyung June Yim, Soo Yeon Heo, Kil-Nam Kim, Changmann Yoon, Young-Do Nam, Joon Yong Kim, Dong-Wook Hyun, Jin-Woo Bae, Joon Bum Jeong, Heewan Kang, Daekyung Kim
International Journal of Systematic and Evolutionary Microbiology .2013; 63(Pt_10): 3640. CrossRef
Rhodopirellula rosea sp. nov., a novel bacterium isolated from an ark clam Scapharca broughtonii
Seong Woon Roh, Hae-Won Lee, Kyung June Yim, Na-Ri Shin, Jina Lee, Tae Woong Whon, Na-Lae Lim, Daekyung Kim, Jin-Woo Bae
Journal of Microbiology.2013; 51(3): 301. CrossRef
Paenibacillus oceanisediminis sp. nov. isolated from marine sediment
Jina Lee, Na-Ri Shin, Mi-Ja Jung, Seong Woon Roh, Min-Soo Kim, Jung-Sook Lee, Keun Chul Lee, Young-Ok Kim, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology .2013; 63(Pt_2): 428. CrossRef
Ferrimonas pelagia sp. nov., isolated from seawater
Kyung June Yim, Myunglip Lee, Hae-Won Lee, Kil-Nam Kim, Hye-Mi Yang, Mi-Ju Kim, Dong-Wook Hyun, Jin-Woo Bae, Young-Do Nam, Changmann Yoon, Moo-Sang Kim, Seong Woon Roh, Daekyung Kim
International Journal of Systematic and Evolutionary Microbiology .2013; 63(Pt_9): 3175. CrossRef
Kistimonas scapharcae sp. nov., isolated from a dead ark clam (Scapharca broughtonii), and emended description of the genus Kistimonas
Jina Lee, Na-Ri Shin, Hae-Won Lee, Seong Woon Roh, Min-Soo Kim, Young-Ok Kim, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology .2012; 62(Pt_12): 2865. CrossRef
Tropicimonas sediminicola sp. nov., isolated from marine sediment
Na-Ri Shin, Seong Woon Roh, Min-Soo Kim, Bora Yun, Tae Woong Whon, Young-Ok Kim, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology .2012; 62(Pt_10): 2424. CrossRef
Virgibacillus alimentarius sp. nov., isolated from a traditional Korean food
Jandi Kim, Mi-Ja Jung, Seong Woon Roh, Young-Do Nam, Kee-Sun Shin, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology .2011; 61(12): 2851. CrossRef
Microbacterium mitrae sp. nov., isolated from salted turban shell
Yun-Ji Kim, Seong Woon Roh, Mi-Ja Jung, Min-Soo Kim, Eun-Jin Park, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology .2011; 61(2): 399. CrossRef
Dietzia alimentaria sp. nov., isolated from a traditional Korean food
Jandi Kim, Seong Woon Roh, Jung-Hye Choi, Mi-Ja Jung, Young-Do Nam, Min-Soo Kim, Eun-Jin Park, Kee-Sun Shin, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology .2011; 61(9): 2254. CrossRef
Arthrobacter livingstonensis sp. nov. and Arthrobacter cryotolerans sp. nov., salt-tolerant and psychrotolerant species from Antarctic soil
Lars Ganzert, Felizitas Bajerski, Kai Mangelsdorf, André Lipski, Dirk Wagner
International Journal of Systematic and Evolutionary Microbiology .2011; 61(4): 979. CrossRef
Investigation of archaeal and bacterial diversity in fermented seafood using barcoded pyrosequencing
Seong Woon Roh, Kyoung-Ho Kim, Young-Do Nam, Ho-Won Chang, Eun-Jin Park, Jin-Woo Bae
The ISME Journal.2010; 4(1): 1. CrossRef
Kocuria koreensis sp. nov., isolated from fermented seafood
Eun-Jin Park, Seong Woon Roh, Min-Soo Kim, Mi-Ja Jung, Kee-Sun Shin, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology .2010; 60(1): 140. CrossRef
Arthrobacter antarcticus sp. nov., isolated from an Antarctic marine sediment
Pavan Kumar Pindi, Ruth Manorama, Zareena Begum, S. Shivaji
International Journal of Systematic and Evolutionary Microbiology.2010; 60(10): 2263. CrossRef
Oceanobacillus kimchii sp. nov. Isolated from a traditional Korean fermented food
Tae Woong Whon, Mi-Ja Jung, Seong Woon Roh, Young-Do Nam, Eun-Jin Park, Kee-Sun Shin, Jin-Woo Bae
The Journal of Microbiology.2010; 48(6): 862. CrossRef
Kocuria atrinae sp. nov., isolated from traditional Korean fermented seafood
Eun-Jin Park, Min-Soo Kim, Seong Woon Roh, Mi-Ja Jung, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology .2010; 60(4): 914. CrossRef
Haladaptatus cibarius sp. nov., an extremely halophilic archaeon from seafood, and emended description of the genus Haladaptatus
Seong Woon Roh, Myung-Lip Lee, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology.2010; 60(5): 1187. CrossRef
Agromyces atrinae sp. nov., isolated from fermented seafood
Eun-Jin Park, Min-Soo Kim, Mi-Ja Jung, Seong Woon Roh, Ho-Won Chang, Kee-Sun Shin, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology .2010; 60(5): 1056. CrossRef
Arthrobacter halodurans sp. nov., a new halotolerant bacterium isolated from sea water
Yi-Guang Chen, Shu-Kun Tang, Yu-Qin Zhang, Zhao-Yang Li, Lang-Bo Yi, Yong-Xia Wang, Wen-Jun Li, Xiao-Long Cui
Antonie van Leeuwenhoek.2009; 96(1): 63. CrossRef
Paracoccus aestuarii sp. nov., isolated from tidal flat sediment
S. W. Roh, Y.-D. Nam, H.-W. Chang, K.-H. Kim, M.-S. Kim, K.-S. Shin, J.-H. Yoon, H.-M. Oh, J.-W. Bae
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY.2009; 59(4): 790. CrossRef
Haloterrigena jeotgali sp. nov., an extremely halophilic archaeon from salt-fermented food
S. W. Roh, Y.-D. Nam, H.-W. Chang, K.-H. Kim, Y. Sung, M.-S. Kim, H.-M. Oh, J.-W. Bae
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY.2009; 59(9): 2359. CrossRef
Nocardioides basaltis sp. nov., isolated from black beach sand
K.-H. Kim, S. W. Roh, H.-W. Chang, Y.-D. Nam, J.-H. Yoon, C. O. Jeon, H.-M. Oh, J.-W. Bae
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY.2009; 59(1): 42. CrossRef
Alishewanella aestuarii sp. nov., isolated from tidal flat sediment, and emended description of the genus Alishewanella
S. W. Roh, Y.-D. Nam, H.-W. Chang, K.-H. Kim, M.-S. Kim, H.-M. Oh, J.-W. Bae
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY.2009; 59(2): 421. CrossRef
Sphingomonas aestuarii sp. nov., isolated from tidal flat sediment
S. W. Roh, K.-H. Kim, Y.-D. Nam, H.-W. Chang, M.-S. Kim, H.-M. Oh, J.-W. Bae
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY.2009; 59(6): 1359. CrossRef
Halorubrum cibi sp. nov., an extremely halophilic archaeon from salt-fermented seafood
Seong Woon Roh, Jin-Woo Bae
The Journal of Microbiology.2009; 47(2): 162. CrossRef
Nitratireductor basaltis sp. nov., isolated from black beach sand
K.-H. Kim, S. W. Roh, H.-W. Chang, Y.-D. Nam, J.-H. Yoon, C. O. Jeon, H.-M. Oh, J.-W. Bae
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY.2009; 59(1): 135. CrossRef
Phylogenetic Characterization of Two Novel Commensal Bacteria Involved with Innate Immune Homeostasis inDrosophila melanogaster
Seong Woon Roh, Young-Do Nam, Ho-Won Chang, Kyoung-Ho Kim, Min-Soo Kim, Ji-Hwan Ryu, Sung-Hee Kim, Won-Jae Lee, Jin-Woo Bae
Applied and Environmental Microbiology.2008; 74(20): 6171. CrossRef
Marinobacter goseongensis sp. nov., from seawater
S. W. Roh, Z.-X. Quan, Y.-D. Nam, H.-W. Chang, K.-H. Kim, S.-K. Rhee, H.-M. Oh, C. O. Jeon, J.-H. Yoon, J.-W. Bae
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY.2008; 58(12): 2866. CrossRef
Genomics of biological wastewater treatment
Roland J. Siezen, Marco Galardini
Microbial Biotechnology.2008; 1(5): 333. CrossRef
List of new names and new combinations previously effectively, but not validly, published

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY.2008; 58(9): 1993. CrossRef
Luteimonas aestuarii sp. nov., isolated from tidal flat sediment
Seong Woon Roh, Kyoung-Ho Kim, Young-Do Nam, Ho-Won Chang, Min-Soo Kim, Jung-Hoon Yoon, Hee-Mock Oh, Jin-Woo Bae
The Journal of Microbiology.2008; 46(5): 525. CrossRef
Marinomonas basaltis sp. nov., a marine bacterium isolated from black sand
H.-W. Chang, S. W. Roh, K.-H. Kim, Y.-D. Nam, J.-H. Yoon, H.-M. Oh, J.-W. Bae
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY.2008; 58(12): 2743. CrossRef
Aliihoeflea aestuarii gen. nov., sp. nov., a novel bacterium isolated from tidal flat sediment
Seong Woon Roh, Kyoung-Ho Kim, Young-Do Nam, Ho-Won Chang, Min-Soo Kim, Kee-Sun Shin, Jung-Hoon Yoon, Hee-Mock Oh, Jin-Woo Bae
The Journal of Microbiology.2008; 46(5): 594. CrossRef

Factors Indicating Culture Status During Cultivation of Spirulina (Arthrospira) platensis: Choong-Jae Kim , Yun-Ho Jung , Hee-Mock Oh; J. Microbiol. 2007;45(2):122-127.; DOI: https://doi.org/2524 [pii]

502 View
1 Download

Abstract PDF: Factors indicating culture status of two Spirulina platensis strains were monitored in a batch mode cultivation for 36 days. Changing mode in all factors showed a common turning point, indicating shift of cell or culture status. Mean biomass productivity was highly sustained until day 22, chlorophyll a concentration peaked on day 22, pH value was >12 on day 22, coil number was abruptly shortened on day 22, and floating activity was sustained at greater than 79% after day 22, indicating that day 22 is a criterion reflecting phase-transfer in cell physiology in a batch culture system. Many of these changes may have been caused by increased pH, suggesting that pH control is essential for mass production of S. platensis. Fluctuations in floating activity were likely induced by the number of cellular gas vacuoles. Consequently, coil number per trichome and floating activity of S. platensis could readily act as simple indicators for determination of culture status or harvesting time of cells.

Alternative Alert System for Cyanobacterial Bloom, Using Phycocyanin as a Level Determinant: Chi-Yong Ahn , Seung-Hyun Joung , Sook-Kyoung Yoon , Hee-Mock Oh; J. Microbiol. 2007;45(2):98-104.; DOI: https://doi.org/2527 [pii]

570 View
2 Download

Abstract PDF: Chlorophyll a concentration and cyanobacterial cell density are regularly employed as dual criteria for determinations of the alert level for cyanobacterial bloom. However, chlorophyll a is not confined only to the cyanobacteria, but is found universally in eukaryotic algae. Furthermore, the determination of cyanobacterial cell counts is notoriously difficult, and is unduly dependent on individual variation and trained skill. A cyanobacteria-specific parameter other than the cell count or chlorophyll a concentration is, accordingly, required in order to improve the present cyanobacterial bloom alert system. Phycocyanin has been shown to exhibit a strong correlation with a variety of bloom-related factors. This may allow for the current alert system criteria to be replaced by a three-stage alert system based on phycocyanin concentrations of 0.1, 30, and 700 μg/L. This would also be advantageous in that it would become far more simple to conduct measurements without the need for expensive equipment, thereby enabling the monitoring of entire lakes more precisely and frequently. Thus, an alert system with superior predictive ability based on highthroughput phycocyanin measurements appears feasible.

Simple Method for a Cell Count of the Colonial Cyanobacterium, Microcystis sp.: Seung-Hyun Joung , Choong-Jae Kim , Chi-Yong Ahn , Kam-Yong Jang , Sung Min Boo , Hee-Mock Oh; J. Microbiol. 2006;44(5):562-565.; DOI: https://doi.org/2440 [pii]

564 View
1 Download

Abstract PDF: The cell counting of colonial Microcystis spp. is a rather difficult and error-prone proposition, as this genus forms irregularly-shaped and irregularly-sized colonies, which are packed with cells. Thus, in order to facilitate a cell count, four methods of dividing the colonies into single cells were compared, including vortexing, sonication, TiO2 treatment, and boiling. As a result, the boiling method was determined to generate the greatest number of single cells from a colony, and all colonies were found to have divided completely after only 6 min of treatment. Furthermore, no significant cell destruction, which might alter the actual cell density, was detected in conjunction with the boiling method (P = 0.158). In order to compute the cell number more simply, the relationship between the colony size and the cell number was determined, via the boiling method. The colony volume, rather than the area or diameter was correlated more closely with the cell number (r2 = 0.727), thereby suggesting that the cell numbers of colonial Microcystis sp. can also be estimated effectively from their volumes.

Author index