- Patterns and drivers of Vibrio isolates phylogenetic diversity in the Beibu Gulf, China
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Xing Chen , Hong Du , Si Chen , Xiaoli Li , Huaxian Zhao , Qiangsheng Xu , Jinli Tang , Gonglingxia Jiang , Shuqi Zou , Ke Dong , Jonathan M. Adams , Nan Li , Chengjian Jiang
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J. Microbiol. 2020;58(12):998-1009. Published online October 23, 2020
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DOI: https://doi.org/10.1007/s12275-020-0293-z
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Members of the genus Vibrio are ubiquitous in aquatic environments
and can be found either in a culturable or a viable
but nonculturable (VBNC) state. Despite widespread concerns
as to how to define the occurrence and dynamics of
Vibrio populations by culture-independent approaches, further
physiological research and relevant biotechnological
developments will require the isolation and cultivation of the
microbes from various environments. The present work provides
data and perspectives on our understanding of culturable
Vibrio community structure and diversity in the Beibu
Gulf. Finally, we isolated 1,037 strains of Vibrio from 45 samples
and identified 18 different species. Vibrio alginolyticus,
V. cyclitrophicus, V. tasmaniensis, V. brasiliensis, and V. splendidus
were the dominant species that had regional distribution
characteristics. The correlation between the quantitative
distribution and community structure of culturable Vibrio and
environmental factors varied with the Vibrio species and geographical
locations. Among them, salinity, nitrogen, and phosphorus
were the main factors affecting the diversity of culturable
Vibrio. These results help to fill a knowledge gap on
Vibrio diversity and provide data for predicting and controlling
pathogenic Vibrio outbreaks in the Beibu Gulf.
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Citations
Citations to this article as recorded by  - Environmental factors that regulate Vibrio spp. abundance and community structure in tropical waters
Yi You Wong, Choon Weng Lee, Chui Wei Bong, Joon Hai Lim, Ching Ching Ng, Kumaran Narayanan, Edmund Ui Hang Sim, Ai-jun Wang
Anthropocene Coasts.2024;[Epub] CrossRef - Co-occurrence of chromophytic phytoplankton and the Vibrio community during Phaeocystis globosa blooms in the Beibu Gulf
Qiangsheng Xu, Pengbin Wang, Jinghua Huangleng, Huiqi Su, Panyan Chen, Xing Chen, Huaxian Zhao, Zhenjun Kang, Jinli Tang, Gonglingxia Jiang, Zhuoting Li, Shuqi Zou, Ke Dong, Yuqing Huang, Nan Li
Science of The Total Environment.2022; 805: 150303. CrossRef - Virulence mechanisms of vibrios belonging to the Splendidus clade as aquaculture pathogens, from case studies and genome data
Weiwei Zhang, Chenghua Li
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- Carbohydrate metabolism genes dominant in a subtropical marine mangrove ecosystem revealed by metagenomics analysis
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Huaxian Zhao , Bing Yan , Shuming Mo , Shiqing Nie , Quanwen Li , Qian Ou , Bo Wu , Gonglingxia Jiang , Jinli Tang , Nan Li , Chengjian Jiang
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J. Microbiol. 2019;57(7):575-586. Published online June 27, 2019
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DOI: https://doi.org/10.1007/s12275-019-8679-5
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965
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Abstract
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Mangrove sediment microorganisms play a vital role in the
energy transformation and element cycling in marine wetland
ecosystems. Using metagenomics analysis strategy, we
compared the taxonomic structure and gene profile of the
mangrove and non-mangrove sediment samples at the subtropical
estuary in Beibu Gulf, South China Sea. Proteobacteria,
Bacteroidetes, and Firmicutes were the most abundant
bacterial phyla. Archaeal family Methanosarcinaceae
and bacterial genera Vibrio and Dehalococcoides were significantly
higher in the mangrove sediments than in the nonmangrove
sediments. Functional analysis showed that “Carbohydrate
metabolism” was the most abundant metabolic
category. The feature of carbohydrate-active enzymes (CZs)
was analyzed using the Carbohydrate-Active EnZymes Database.
The significant differences of CZs between mangrove
and non-mangrove sediments, were attributed to the amounts
of polyphenol oxidase (EC 1.10.3.-), hexosyltransferase (EC
2.4.1.-), and β-N-acetylhexosaminidase (EC 3.2.1.52), which
were higher in the mangrove sediment samples. Principal
component analysis indicated that the microbial community
and gene profile between mangrove and non-mangrove sediments
were distinct. Redundancy analysis showed that total
organic carbon is a significant factor that affects the microbial
community and gene distribution. The results indicated
that the mangrove ecosystem with massive amounts of organic
carbon may promote the richness of carbohydrate metabolism
genes and enhance the degradation and utilization
of carbohydrates in the mangrove sediments.
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Citations
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