Skip Navigation
Skip to contents

Journal of Microbiology : Journal of Microbiology

OPEN ACCESS
SEARCH
Search

Author index

Page Path
HOME > Browse Articles > Author index
Search
Dongwook Kim 4 Articles
Erratum to: UBCG2: Up‑to‑Date Bacterial Core Genes and Pipeline for Phylogenomic Analysis
Jihyeon Kim , Seong-In Na , Dongwook Kim , Jongsik Chun
J. Microbiol. 2023;61(10):937-937.
DOI: https://doi.org/10.1007/s12275-023-00074-0
  • 597 View
  • 3 Download
AbstractAbstract PDF
Erratum to: Introducing EzAAI: A Pipeline for High Throughput Calculations of Prokaryotic Average Amino Acid Identity
Dongwook Kim , Sein Park , Jongsik Chun
J. Microbiol. 2023;61(9):879-879.
DOI: https://doi.org/10.1007/s12275-023-00075-z
  • 668 View
  • 5 Download
  • 1 Web of Science
AbstractAbstract PDF
UBCG2: Up-to-date bacterial core genes and pipeline for phylogenomic analysis
Jihyeon Kim , Seong-In Na , Dongwook Kim , Jongsik Chun
J. Microbiol. 2021;59(6):609-615.   Published online May 29, 2021
DOI: https://doi.org/10.1007/s12275-021-1231-4
  • 1,230 View
  • 7 Download
  • 260 Web of Science
  • 270 Crossref
AbstractAbstract PDF
Phylogenomic tree reconstruction has recently become a routine and critical task to elucidate the evolutionary relationships among bacterial species. The most widely used method utilizes the concatenated core genes, universally present in a single-copy throughout the bacterial domain. In our previous study, a bioinformatics pipeline termed Up-to-date Bacterial Core Genes (UBCG) was developed with a set of bacterial core genes selected from 1,429 species covering 28 phyla. In this study, we revised a new bacterial core gene set, named UBCG2, that was selected from the more extensive genome sequence set belonging to 3,508 species spanning 43 phyla. UBCG2 comprises 81 genes with nine Clusters of Orthologous Groups of proteins (COGs) functional categories. The new gene set and complete pipeline are available at http://leb.snu.ac.kr/ubcg2.

Citations

Citations to this article as recorded by  
  • Isolation and mechanistic study of novel PLA-degrading bacteria from plastic manufacturing soil
    Yuan Yuan, Guoji Zhang, Wenxin Song, Yunpeng Shao, Weifeng Cao, Changsheng Qiao, Baosong Chen
    Bioresource Technology.2027; 463: 135745.     CrossRef
  • Genomic Analysis, Metabolite Characterization, and Wheat Seedling Growth Promotion of Variovorax Endophyticus sp. nov., A Novel Endophyte from Wheat Root Tissue
    Jin Cheng, Feng Yang, Lingli Zhang, Jiaxin Zhao, Xue Zhang, Hongjiao Qiao, Zhiying Yan, Yinggang Luo, Yumei Dai
    Current Microbiology.2026;[Epub]     CrossRef
  • Apilactobacillus pseudapinorum sp. nov., isolated from polyfloral honey
    Rio Kanaya, Shintaro Maeno, Atsushi Hisatomi, Moriya Ohkuma, Mitsuo Sakamoto, Akihito Endo
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Mesorhizobium maamorense sp. nov., a novel symbiotic nitrogen-fixing bacterium isolated from nodules of Ononis repens in the Moroccan Maâmora forest
    Soufiane Alami, Chaima Laadraoui, Kaoutar Kaddouri, Mouad Lamrabet, Zohra Chaddad, Bacem Mnasri, Pierre-Emmanuel Courty, Mustapha Missbah El Idrissi
    Antonie van Leeuwenhoek.2026;[Epub]     CrossRef
  • Description of 15 novel species within genus Janthinobacterium isolated from glaciers
    Lei-Lei Yang, Yu-Hua Xin, Qing Liu
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Comparison of Predatory Phenotypes and Genotypes Between Bdellovibrio sp. BIS2 and Bacteriovorax sp. HI3 Isolated From the Same Freshwater Environment
    Tomomi Sugiyama, Tsubasa Kojima, Naoki A. Uemura, Daisuke Nakane, Hideo Dohra, Daisuke Inoue, Michihiko Ike
    Environmental Microbiology.2026;[Epub]     CrossRef
  • Functional Genome Prediction and Genome-Scale Metabolic Modeling of the Rhizobacteria Serratia liquefaciens Strain UNJFSC002
    Cristina Karina Andrade Alvarado, Zoila Felipa Honorio Durand, Sergio Eduardo Contreras-Liza, Gianmarco Castillo, William Andres Guzman Sanchez, Diego Hiroshi Takei-Idiaquez, Julio E. Ballen-Gavidia, Carlos I. Arbizu, Pedro M. Rodriguez-Grados
    Genes.2026; 17(2): 169.     CrossRef
  • Genomic insights into Streptococcus suis serotype 6 isolated from snakeskin gourami: Host adaptation, environmental stressors, and one health implications
    Surawit Chueahiran, Young-Ung Heo, Putita Chokmangmeepisarn, Dung Ho My Nguyen, Manami Morishita, Pochara Prukbenjakul, Partho Pratim Debnath, Anurak Uchuwittayakul, Do-Hyung Kim, Channarong Rodkhum
    Aquaculture.2026; 615: 743619.     CrossRef
  • Complete Genome Sequencing of Streptomyces sp. Qhu-M197 Isolated from Alpine Meadows in the Qinghai-Tibetan Plateau Uncovers Biosynthetic Gene Clusters Encoding Bioactive Natural Products
    Xin Xiang, Jiakai Fan, Xingyu Liu, Guangzhi Li, Chenghang Sun, Benyin Zhang
    Biochemical Genetics.2026; 64(4): 5752.     CrossRef
  • Lotipaludicoccus stagni gen. nov., sp. nov., within the Family Opitutaceae, Isolated from a Lotus Wetland
    Miri S. Park, Hyerim Cho, Yeonjung Lim, Ilnam Kang, Jang-Cheon Cho
    Current Microbiology.2026;[Epub]     CrossRef
  • Molecular evolution and diversity of isomerase–reductase clusters involved in the bacterial metabolism of glycosaminoglycans
    Yu Nishimura, Kenji Okumura, Sayoko Oiki, Kohei Ogura, Wataru Hashimoto, Craig D. Ellermeier
    mSphere.2026;[Epub]     CrossRef
  • Antrihabitans auranticaus sp. nov., Isolated from a Cave, and Emended Description of the Genus Antrihabitans
    Soon Dong Lee, Hong Lim Yang, In Seop Kim
    Current Microbiology.2026;[Epub]     CrossRef
  • Lactobacillus-vectored nanobodies improve broiler productivity under sub-clinical necrotic enteritis with associated microbiome and transcriptome changes
    Ashley N. Hall, Simmi Manuja, Laura M. Payling, Luis F. Romero, Frederic J. Hoerr, Jacob Shields, Charles Hofacre, Dwi Susanti, Dharanesh Gangaiah, Germán Plata, Arvind Kumar
    npj Biofilms and Microbiomes.2026;[Epub]     CrossRef
  • Sphingomonas degradans sp. nov. and Sphingomonas paludis sp. nov., isolated from the Han River and a wetland in South Korea
    Seung-Tae Kim, Miryung Kim, Chang-Jun Cha
    Journal of Microbiology.2026; 64(1): e2510010.     CrossRef
  • Ten novel psychrophilic Flavobacterium species from Tibetan Plateau glaciers define a cryospheric lineage with global cold-origin relatives
    Qing Liu, Lei-Lei Yang, Yu-Hua Xin
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Genomic and taxonomic characterization of strain CCM 2573: Uncovering unique genetic features and description of Macrococcus caseolyticus subsp. lactis subsp. nov.
    Ivana Mašlaňová, Dana Nováková, Pavel Švec, Vojtěch Kovařovic, Ivo Sedláček, Tibor Botka, Ondrej Šedo, Meina Neumann-Schaal, Jitka Vives, Jiří Doškař, Roman Pantůček
    Folia Microbiologica.2026;[Epub]     CrossRef
  • Pseudenemella bisphenolivorans gen. nov., sp. nov., a Bisphenol A Degrading Actinobacterium Isolated from Waste Digestion System
    Kangni Ren, Chuansheng Geng, Qinghua Zhang, Tongchu Deng, Meiying Xu
    Current Microbiology.2026;[Epub]     CrossRef
  • Notes on the Description of Novel Prokaryotic Taxa
    Wee Fei Aaron Teo, Juan A. Mondotte, Jia Liu, Hilal Ay, Marcelo Luiz Lima Brandão, Man Cai, Claudia Etchebehere, Wen-Jun Li, Wasu Pathom-aree, Tomoo Sawabe, Taegun Seo
    Current Microbiology.2026;[Epub]     CrossRef
  • Oceanimonas aquatica sp. nov. and Arenibacter flavimaris sp. nov., isolated from seawater
    Sunho Park, Hyunji Lee, Subin Yook, Chunghwan Baek, Jisu Kim, Seunghui Kwak, Taeho Na, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Methylobacterium synurae sp. nov., isolated from a freshwater alga Synura petersenii
    Yeong Ung Yu, Si Hyeon Lee, Che Ok Jeon, Kyung Hyun Kim
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Microvirga medicaginis sp. nov., isolated from the soil of Dongying City
    Duxiang Zheng, Haisheng Wang, Yijun Li, Fu Yang, Bo Zhou, Xiaoxia Zhang
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Methylobacterium endophyticum sp. nov. and Endoryza foliicola gen. nov., sp. nov., two novel endophytic bacterial species isolated from rice phyllosphere
    Hui-Yuan Jiang, Guo-Hong Liu, Yuan-Jia Xu, Hao-Cheng Shen, Peng Gao, Shun-Gui Zhou
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Subcuticular symbionts of intertidal brittle stars: diversity, host specificity, and functional potential
    Keisuke Kawano, Hiroyuki Morimura, Tatsuya Awano, Yoshitomo Kikuchi, Shigeki Sawayama, Satoshi Nakagawa
    ISME Communications.2026;[Epub]     CrossRef
  • Draft genome sequences of Alicyclobacillus strains isolated from the Chinoike-Jigoku hot spring, Oita, Japan
    Yu Sato, Eriko Miyamoto, Yuna Sato, Shintaro Maeno, Simon Roux
    Microbiology Resource Announcements.2026;[Epub]     CrossRef
  • Acidaminococcus nyctereutis sp. nov., a bacterium isolated from the gut of a raccoon dog (Nyctereutes procyonoides)
    Shuo Li, Xue Zhang, Jia-Xin Zhao, Yun-Bo Miao, Hai-Hua Zhang, Yu-Mei Dai
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Genome Mining Guided Identification of the Metallophore Delftichelin A from Delftia deserti
    Martinus de Kruijff, Lukas Hiller, Joy Birkelbach, Tanya Decker, Sebastian Götze, Rebecca Kochems, Rolf Müller, Anna K. H. Hirsch, Christine Beemelmanns
    Journal of Natural Products.2026; 89(4): 1318.     CrossRef
  • Polyphasic taxonomy of glacier-derived Variovorax strains reveals 13 novel species
    Zi-Yun Chen, Yu-Hua Xin, Qing Liu
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Genomic and clinical characteristics of Staphylococcus aureus isolates associated with orthopedic infections from a rural hospital, Qingdao, China
    Ying Wang, Yingdi Wang, Chao Liu, Dan Zhao, Yanxiang Cui, Xiaoxuan Guan, Guilai Jiang, Shunqian Yuan, Xinting Meng, Jianqiang Hu, Wenbo Xia, Jie Liu, Nagendran Tharmalingam
    Microbiology Spectrum.2026;[Epub]     CrossRef
  • Actinotalea endophytica sp. nov., a Novel Endophytic Actinobacterium Isolated from Sonneratia apetala
    Huiling Tang, Zhouqing Zheng, Mingsheng Chen, Xiaohui Chen, Dongqiang Yan, Hong Li, Li Tuo, Feina Li
    Current Microbiology.2026;[Epub]     CrossRef
  • Description and genomic insights of Niallia laureatilytica sp. nov., isolated from coastal ecosystem
    Neetha Joseph, Datta Madamwar, Mansi Gangtire, Namrata Jiya, Vilas Patel, Amaraja Joshi, Prachi Karodi, Avinash Sharma
    Antonie van Leeuwenhoek.2026;[Epub]     CrossRef
  • Kamagatella elastica gen. nov., sp. nov., an anaerobic bacterium representing the family Kamagatellaceae fam. nov. within the order Tissierellales, isolated from a xenic culture of an anaerobic bacterivorous protist
    Ryuji Kondo, Takafumi Kataoka
    Antonie van Leeuwenhoek.2026;[Epub]     CrossRef
  • Pilosibacter rotomagensis sp. nov., a Butyrate-Producing Bacterium Isolated from Human Faeces
    Noémie Gloanec, Marion Huré, Laetitia Bailly, Émilie Petit, Corinne Loutelier-Bourhis, Didier Goux, Moïse Coëffier, David Ribet
    Current Microbiology.2026;[Epub]     CrossRef
  • Paramicrobacterium salitolerans sp. nov. isolated from the agricultural soil and Microbacterium fluminis sp. nov. isolated from the Han River, South Korea
    Gracia Pradnya Lolita, Do-Hoon Lee, Yong-Seok Kim, Chang-Jun Cha
    Journal of Microbiology.2026; 64(4): e2512014.     CrossRef
  • Burkholderia spp. from HLB-Escape Rhizosphere Suppress Candidatus Liberibacter asiaticus Titers and Induce Defense Responses in Citrus
    Yuzhen Tian, Libo Wu, Xiaolin Xie, Jun Gu, Shaolong Zhang, Hang Chen, Baihong Zhang, Xin Deng, Xizi Wang, Yuwen Jiang, Yun Zhong, Wenli Chen
    Journal of Agricultural and Food Chemistry.2026; 74(17): 13564.     CrossRef
  • Pseudomonas gebzensis sp. nov., a Carotenoid-Producing Species Isolated from Solar Panels in Türkiye
    Aleyna Nalcaoglu Senocak, Saadet Alpdagtas, Fatma Ertan, Ersan Bektas, Elif Nilhan Uzun, Halil İbrahim Guler, Ali Osman Belduz, Kadriye Inan Bektas
    Current Microbiology.2026;[Epub]     CrossRef
  • Bradyrhizobium zaerense sp. nov., an efficient symbiotic nitrogen-fixing bacterium isolated from Lupinus luteus and Retama dasycarpa root nodules
    Zohra Chaddad, Kaoutar Kaddouri, Mouad Lamrabet, Soufiane Alami, Bacem Mnasri, Daniel Wipf, Pierre-Emmanuel Courty, Mustapha Missbah El Idrissi
    Systematic and Applied Microbiology.2026; 49(3): 126712.     CrossRef
  • When MALDI-TOF MS and 16S rRNA gene sequencing are not enough: identification of Gordonia hongkongensis causing bloodstream infection
    Ariel Gianecini, Maria Florencia Abeiro, Florencia Rocca, Sergio Daniele, Juan Francisco Losinno, Lucia Cipolla, Maria Virginia Gonzalez, Nicholas M. Moore
    ASM Case Reports.2026;[Epub]     CrossRef
  • Sphingomonas benefaciens sp. nov. and Sphingomonas cellulosilytica sp. nov., two potential plant growth-promoting bacteria isolated from citrus phyllosphere
    Honghong Dong, Qian Yang, Ming-Rong Deng, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Parasediminibacterium schistidii sp. nov., a novel member of the family Chitinophagaceae isolated from a glacier moss ball in the Canadian High Arctic
    Shu-Kuan Wong, Yu Nakajima, Hiroshi Kanda, Vincent Maire, Masaki Uchida
    Antonie van Leeuwenhoek.2026;[Epub]     CrossRef
  • Chryseobacterium electrogenes sp. nov., an electrogenic bacterium isolated from the Mars-analogue Aiken Spring in the Qaidam Basin, Northwest China
    Bing Yang, Zhenyu Chen, Bo Cao, Yueying Lu, Hong Liu, Ting Huang, Yuming Fu, Long Xiao
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Marinomonas algae sp. nov. and Marinomonas phycocola sp. nov., two novel bacteria isolated from marine algae
    Yea-Lin Moon, Kyoungdong You, Kyung Hyun Kim, Jin-Sook Park
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Companilactobacillus miaonis sp. nov. – a novel bacterium isolated from zha-chili
    Jiangping Wu, Dongying Ge, Zhuang Guo, Qiangchuan Hou, Huijun Zhao, Chengcong Yang, Dingwu Qu, Yurong Wang
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Acinetobacter pengchengensis sp. nov., isolated from the urban wastewater of Shenzhen, Guangdong Province, China
    Panpan Yang, Bingchan Guo, Yinghui Li, Dingjie Huang, Xi Yang, Lei Wang, Ziqi Wu, Yanpeng Cheng, Qinghua Hu
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Elucidating the molecular basis of Streptomyces antifungal activity against Fusarium verticillioides, causing maize ear and stalk rot pathogen
    K.N. Pallavi, M.K. PrasannaKumar, J. Harish, R. Karan, Gopal Venkateshbabu, M. Nithish, C. Manjunatha, Deepaka, Swathi S. Patil, Aditya Narayan Sarangi
    Biocatalysis and Agricultural Biotechnology.2026; 75: 104122.     CrossRef
  • Distinguishing Leptothrix and Sphaerotilus genera by an integrated genomic-phenotypic analysis supported by new Leptothrix genomes
    Gracee K. Tothero, Jessica L. Keffer, David Emerson, Emily J. Fleming, Clara S. Chan, Ryan J. Newton
    mSystems.2026;[Epub]     CrossRef
  • Isolation and characterization of Pseudarthrobacter cremeus sp. nov. and Ideonella flava sp. nov. from mountain soil
    Chunghwan Baek, Sunho Park, Hyunji Lee, Subin Yook, Seunghui Kwak, Jisu Kim, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Isolation and characterization of a salt- and oxygen-tolerant Bifidobacterium from Kishu-Narezushi
    Takato Hirata, Koki Obai, Miki Kubo, Yuichiro Ikagawa, Hitoshi Iwahashi
    Bioscience, Biotechnology, and Biochemistry.2026; 90(8): 1114.     CrossRef
  • Antioxidant potential and genomic adaptation of Cetobacterium ceti MaLMAid0298 from the gills of Sebastiscus marmoratus
    Jun Won Lee, Jihyun Yu, Yeon-Ju Lee, Hyein Jin, Jung Eun Yang, Kae Kyoung Kwon, Yun Jae Kim
    Frontiers in Microbiology.2026;[Epub]     CrossRef
  • Description of nine novel psychrophilic Pseudarthrobacter species from glaciers
    Lei-Lei Yang, Yu-Hua Xin, Qing Liu
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Phylogenomic Characterization of Hydrogenophaga sedimenti sp. nov. and Larkinella fluvii sp. nov. Isolated from Riverbed Soil
    Sunho Park, Hyunji Lee, Subin Yook, Chunghwan Baek, Jisu Kim, Seunghui Kwak, Taegun Seo
    Current Microbiology.2026;[Epub]     CrossRef
  • Azospirillum caeni sp. nov., a mesotrione-resistant and nitrogen-fixing bacterium isolated from an activated sludge
    Minglai Wan, Chenghui Li, Le Chen, Xiaodong Hou, Jian He, Baolong Zhang
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Metagenomic analysis of water column samples collected from Green Canyon 233 prior to the Deepwater Horizon incident
    Shen Jean Lim, Luke R. Thompson, Kelly Goodwin, Jennifer F. Biddle
    Applied and Environmental Microbiology.2026;[Epub]     CrossRef
  • Duganella paludis sp. nov. and Pedobacter jaeyakensis sp. nov., isolated from the wetland fresh water
    Yu Jeong Lee, Hae Jin Kim, Won Jeong Hwang, Byung Hee Chun
    Antonie van Leeuwenhoek.2026;[Epub]     CrossRef
  • Bacillus silvicola sp. nov., a new species within the Bacillus cereus group isolated from hardwood forest soil in Maryland, USA
    Holly P. Bartholomew, Michael E. Sparks, Daniel Kuhar, Ashaki Mitchell, Robert R. Farrar, Dawn E. Gundersen-Rindal, Michael B. Blackburn
    Scientific Reports.2026;[Epub]     CrossRef
  • Pseudonocardia wallangbongensis sp. nov., isolated from small mountain (parasitic volcano), with a proposal of Actinospineispora gen. nov. and reclassification of two Pseudonocardia species as later heterotypic synonyms of preexisting species
    Soon Dong Lee, Hong Lim Yang, Katharina Huber-Fischer, Cathrin Spröer, Jolantha Swiderski, In Seop Kim
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Compensatory evolution facilitates loss of prfB autoregulation in Pseudomonas fluorescens SBW25
    Sungbin Lim, Frederic Bertels, Javier Lopez-Garrido, Jenna Gallie, Laasya Samhita
    Molecular Biology and Evolution.2026;[Epub]     CrossRef
  • Polyphasic taxonomy of glacier-derived Arthrobacter strains reveals six novel species within the Arthrobacter agilis group and indicates Arthrobacter vasquezii Valenzuela-Ibaceta et al. 2023 as a later heterotypic synonym of Arthrobacter parietis Heyrman
    Lei-Lei Yang, Yu-Hua Xin, Qing Liu
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Ammonicoccus luteus sp. nov., a novel actinobacterium isolated from the intestine of Argyrosomus argentatus
    Fei Yang, Haifei Liu, Jiawei Li, Caifei Li, Ding Li, Ying Sun, Lifang Yang, Mingguo Jiang
    Archives of Microbiology.2026;[Epub]     CrossRef
  • Shinella agrisoli sp. nov., Isolated from a Pymetrozine-Degrading Bacterial Community
    Delong Kong, Yuanyang Yi, Hao Xu, Siya Wu, Xu Jiang, Zhiyong Ruan, Wei Zhang
    Current Microbiology.2026;[Epub]     CrossRef
  • The van Niel international prize for studies in bacterial systematics, awarded in 2026 to Jon Jongsik Chun
    Iain C. Sutcliffe, Edward R. B. Moore, Aharon Oren
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Genomic and structural insights into the high-efficiency poly(3-hydroxybutyrate) biodegradation in Terrabacter sp. AAH1
    Sunho Park, Ji Hyuk Ko, Chaeyeon Yang, Seohyun Jeong, Jisu Kim, Seunghui Kwak, Hyunji Lee, Subin Yook, Chunghwan Baek, Jae Young Lee, Taegun Seo
    Frontiers in Microbiology.2026;[Epub]     CrossRef
  • Genomic sequencing of vineyard-isolated Bacillus strains and comparison with closely related Bacillus species reveals a putative new lineage, distinct pan-genome architecture and secondary metabolism potential
    Adeoye J. Kayode, Edwin I. Wanjofu, Mathabatha Evodia Setati
    Frontiers in Microbiology.2026;[Epub]     CrossRef
  • Albidovulum molybdatiresistens sp. nov., a molybdate-resistant bacterium isolated from river water
    Yuanshuo Qiu, Jianjun Song, Jia Wang, Donghui Sun, Xiuting Zhang, Hanyun Cui, Menghan Kang, Yanfang Zhao, Zhenbiao Xu, Aijv Liu, Rui Zhang, Hongliang Liu
    Antonie van Leeuwenhoek.2026;[Epub]     CrossRef
  • Prauseria antiqua gen. nov., sp. nov., a New Member of the Actinomycete Family Jiangellaceae
    E. V. Ariskina, A. N. Avtukh, S. V. Tarlachkov, L. V. Dorofeeva, A. V. Borisov, L. I. Evtushenko
    Microbiology.2026; 95(5): 729.     CrossRef
  • Rhodococcus folensis sp. nov., an orange-red-pigmented bacterium from mining soil
    Aleyna Nalcaoglu Senocak, Omer Faruk Ozturk, Miray Kilic, Ersan Bektas, Ali Osman Belduz, Kadriye Inan Bektas
    Scientific Reports.2026;[Epub]     CrossRef
  • Anaerostipes stercorihominis sp. nov., isolated from human faeces
    Tomoki Tanabe, Atsushi Hisatomi, Moriya Ohkuma, Mitsuo Sakamoto, Akihito Endo
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Faecalibacterium harmsenii sp. nov., an abundant but previously overlooked Faecalibacterium in the human gut
    Qiqi Pan, Eleni Tsompanidou, Wenbing Hu, Muhammad Tanweer Khan, Jan Maarten van Dijl
    ISME Communications.2026;[Epub]     CrossRef
  • Isolation and Genomic Characterisation of Five Novel Lytic Bacteriophages Infecting the Emerging Pathogen Klebsiella grimontii
    Anna Tokmakova, Anna Lukianova, Mikhail Shneider, Ilia Putilov, Maria Filatova, Anna Burtseva, Konstantin M. Boyko, Yuliya Mikhailova, Andrey Shelenkov, Elizaveta Popova, Konstantin Miroshnikov
    Viruses.2026; 18(9): 942.     CrossRef
  • Twenty-two novel glacier Pseudomonas species expand cultivated representation: nitrogen-cycling potential and temperature-responsive proteomes
    Chan Zhao, Lei-Lei Yang, Yu-Hua Xin, Qing Liu
    ISME Communications.2026;[Epub]     CrossRef
  • Rhizobacterial biocontrol of potato late blight and genomic insights into disease suppression and growth promotion
    Bekele Gelena Kelbessa, Samrat Ghosh, Farideh Ghadamgahi, Vittoria Catara, Stephen C. Whisson, Rodomiro Ortiz, Ramesh Raju Vetukuri
    iScience.2026; 29(10): 117682.     CrossRef
  • Phylogenetic and functional genomic heterogeneity of Bordetella bronchiseptica isolates from culture collections
    PV Asmaeva, OYu Borisova, AS Pimenova, IYu Andrievskaya, AV Chaplin, LI Kafarskaya, BA Efimov, PV Evseev
    Bulletin of Russian State Medical University.2026;[Epub]     CrossRef
  • Genome‐Enabled Characterisation of Fusarium sacchari as a Novel Root Rot Pathogen of Coconut
    Kurubarahalli Narayanaswamy Pallavi, Muthakapalli Krishnareddy Prasannakumar, Raju Karan, Jayarama Reddy Harish, Keerti Sharma, Kattarigatta Topegowda Rangaswamy, Swathi Shivanagouda Patil, Hosahally Venkategowda Rame Gowda, Channappa Manjunatha, Pramesh
    Plant Pathology.2026;[Epub]     CrossRef
  • Allomesorhizobium aridi sp. nov., a novel symbiotic nitrogen-fixing species isolated from root nodules of Astragalus armatus growing in lead mine tailings in the Middle Atlas, Morocco
    Soufiane Alami, Kaoutar Kaddouri, Zohra Chaddad, Mouad Lamrabet, Bacem Mnasri, Pierre-Emmanuel Courty, Mustapha missbah El Idrissi
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Proposal of Lactococcus intestinalis Sun et al. 2024 as a Later Heterotypic Synonym of Lactococcus muris Afrizal et al. 2023
    Xin-Yu Zhu, Chun Tao Gu
    Current Microbiology.2025;[Epub]     CrossRef
  • Genomic insights into drug resistance and virulence determinants in rare pyomelanin-producing clinical isolates of Acinetobacter baumannii
    Lipsa Panda, Krishnapriya GK, Ajit Ramesh Sawant, Santosh Kumar Singh, Minakshi Gupta, Sheela Devi C, P Shashikala, K Prashanth
    European Journal of Clinical Microbiology & Infectious Diseases.2025; 44(3): 533.     CrossRef
  • Taxonomic and genomic characterization of a siderophore-producing bacterium, Rhodoligotrophos ferricapiens sp. nov isolated from lettuce cultivation soil
    Yu-Jin Kim, Yong-Seok Kim, Chang-Jun Cha
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Streptomyces yaizuensis sp. nov., a berninamycin C-producing actinomycete isolated from sponge
    Miku Takahashi, Kanata Hoshino, Moriyuki Hamada, Tomohiko Tamura, Ryota Moriuchi, Hideo Dohra, Youji Nakagawa, Susumu Kokubo, Motoyuki Yamazaki, Hiroyuki Nakagawa, Masayuki Hayakawa, Shinya Kodani, Hideki Yamamura
    The Journal of Antibiotics.2025; 78(1): 35.     CrossRef
  • Proposal of Crystallibacter gen. nov., Crystallibacter permensis sp. nov. and Crystallibacter degradans sp. nov. for the salt-tolerant and aromatics degrading actinobacteria, and reclassification of Arthrobacter crystallopoietes as Crystallibacter crystal
    Elena G. Plotnikova, Elena V. Ariskina, Olga V. Yastrebova, Natalia V. Potekhina, Alexander N. Avtukh, Sergey V. Tarlachkov, Irina P. Starodumova, Lyubov V. Dorofeeva, Lyudmila I. Evtushenko
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Description and genomic characterization of Mangrovibrevibacter kandeliae gen. nov. sp. nov., a novel carotenoid-producing endophytic bacterium isolated from branch of mangrove plants
    Chengshao Zan, Zhouqing Zheng, Xiaohui Chen, Mingsheng Chen, Feina Li, Li Tuo
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Parasalinivibrio latis gen. nov., sp. nov., isolated from the distal gut of healthy farmed Asian Seabass (Lates calcarifer)
    Shuan Er, Melissa Soh, Adrian Low, Henning Seedorf
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Phenotypic and Complete Reference Whole Genome Sequence Analyses of Two Paenibacillus spp. Isolates from a Gray Wolf (Canis lupus) Gastrointestinal Tract
    Jessika L. Bryant, Jennifer McCabe, C. Cristoph Klews, MiCayla Johnson, Ariel N. Atchley, Thomas W. Cousins, Maya Barnard-Davidson, Kristina M. Smith, Mark R. Ackermann, Michael Netherland, Nur A. Hasan, Peter A. Jordan, Evan S. Forsythe, Patrick N. Ball,
    Veterinary Sciences.2025; 12(1): 51.     CrossRef
  • Flavobacterium magnesitis sp. nov. and Flavobacterium zubiriense sp. nov., two novel Flavobacterium species isolated from alkaline magnesite residues
    Leonor Matos, Lorrie Maccarrio, Ana Paula Chung, Diogo N. Proença, Søren Sørensen, Paula V. Morais, Romeu Francisco
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Ascidiimonas meishanensis sp. nov. and Leptobacterium meishanense sp. nov., two bacteria isolated from marine sediment in the East China Sea
    Hao Wang, Huiting Wang, Xinyu Liu, Dawoon Jung, Eun-Young Seo, Shan He, Weiyan Zhang, Lijian Ding
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Paenibacillus mesotrionivorans sp. nov., a Mesotrione-Degrading Strain Isolated from Soil
    Ye Song, Yan Wu, Leyao Chen, Luyao Ruan, Minglai Wan, Bin Liu, Jian He, Baolong Zhang
    Current Microbiology.2025;[Epub]     CrossRef
  • Genomic and phenotypic characterisation of Leeuwenhoekiella obamensis sp. nov., a novel marine bacterium isolated from the surface water of a Japanese fishing port
    Yuka Machii, Mao Tsukamoto, Takafumi Kataoka, Ryuji Kondo
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Comamonas halotolerans sp. nov., isolated from the faecal sample of a zoo animal, Naemorhedus caudatus
    Yerim Park, Bitnara Kim, Jihyeon Min, Woojun Park
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Gallibacterium faecale sp. nov., Isolated from Dairy Cow Feces
    Seoung Woo Ryu, Jeong Chan Moon, Byeong Seob Oh, Seung Yeob Yu, Jeong Eun Bak, Eun Seo Heo, Seung-Hwan Park, Se Won Kang, Jiyoung Lee, Mi-Kyung Lee, Mooyoung Jung, Yo Han Choi, Hyeun Bum Kim, Jae-Kyung Kim, Ju-Hoon Lee, Ju Huck Lee
    Current Microbiology.2025;[Epub]     CrossRef
  • Reference Whole Genome Sequence Analyses and Characterization of a Novel Carnobacterium maltaromaticum Distinct Sequence Type Isolated from a North American Gray Wolf (Canis lupus) Gastrointestinal Tract
    C. Cristoph Klews, Jessika L. Bryant, Jennifer McCabe, Ariel N. Atchley, Thomas W. Cousins, Maya Barnard-Davidson, Mark R. Ackermann, Michael Netherland, Nur A. Hasan, Peter A. Jordan, Evan S. Forsythe, Patrick N. Ball, Bruce S. Seal
    Veterinary Sciences.2025; 12(5): 410.     CrossRef
  • Genomic diversity and tracing of Paenibacillus larvae in Australia: implications for American foulbrood outbreak surveillance in low-diversity populations
    Paul Worden, Ashlea Webster, Khushbu Gandhi, Risha Gupta, Ania T. Deutscher, Michael Hornitzky, Daniel Ross Bogema
    Microbial Genomics .2025;[Epub]     CrossRef
  • Discovery of mono-ADP ribosylating toxins with high structural homology to Pseudomonas exotoxin A
    Geoffrey Masuyer, Alistair Taverner, Julia MacKay, Ana Rita Lima Marques, Yuye Wang, Tom Hunter, Keyi Liu, Randall J. Mrsny
    Communications Biology.2025;[Epub]     CrossRef
  • Biocontrol Effect of Bacillus velezensis D7-8 on Potato Common Scab and Its Complete Genome Sequence Analysis
    Yu Jiang, Pengfei He, Huihui Kong, Pengbo He, Yixin Wu, Guowen Tang, Ping Tang, Yining Di, Xingyu Li, Lufeng Liu, Shahzad Munir, Yueqiu He
    Microorganisms.2025; 13(4): 770.     CrossRef
  • House dust microbiome differentiation and phage-mediated antibiotic resistance and virulence dissemination in the presence of endocrine-disrupting chemicals and pharmaceuticals
    Shicong Du, Huiju Lin, Qiong Luo, Chung Ling Man, Sze Han Lai, Kin Fai Ho, Kenneth M. Y. Leung, Patrick K. H. Lee
    Microbiome.2025;[Epub]     CrossRef
  • Fulvimarina uroteuthidis sp. nov., isolated from a marine invertebrate and Uroteuthis (Photololigo) edulis
    Yea-Lin Moon, Kyung Hyun Kim, Jin-Sook Park
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Metabolic response of tellurite resistant Bacillus altitudinis strain 3W19 highlights the potential as a model organism for bioremediation
    Pedro Farias, Romeu Francisco, Lorrie Maccario, Jakob Herschend, Søren J. Sørensen, Paula V. Morais
    Scientific Reports.2025;[Epub]     CrossRef
  • Reclassification of Bifidobacterium faecale Choi et al. 2014 as a later heterotypic synonym of Bifidobacterium adolescentis Reuter 1963
    Shinnosuke Okuhama, Hidenori Takahashi, Yasunori Nakayama, Akihito Endo
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Taxonomic revision of the family Aurantimonadaceae: proposal of Dennerimonas gen. nov., Mesocryomonas gen. nov., Rathsackimonas gen. nov. and Plantimonas gen. nov., along with the reclassification of Jeongeupella Jiang et al. 2024 as a later heterotypic s
    Imed Sbissi, Hana Dali, Rihab Hamra, Emeni Boujemaa, Mohamed Aziz Haj Nasr, Faten Ghodhbane-Gtari, Maher Gtari
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Phylogenomics as baseline for taxonomy description: Amphibiibacter pelophylacis gen. nov., sp. nov., a novel taxon of the family Sphaerotilaceae, class Betaproteobacteria, isolated from the skin microbiota of Pelophylax perezi from different populations
    Sara Costa, Diogo Neves Proença, Isabel Lopes, Paula V. Morais
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Description of Flavobacterium fructosi sp. nov., Flavobacterium xylosi sp. nov. and Flavobacterium zhouii sp. nov., three new members of the genus Flavobacterium
    Dou Han, Lei-Lei Yang, Yu-Hua Xin, Qing Liu
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Enterococcus hailinensis sp. nov., Isolated from Traditional Chinese Pickle
    Ting-Yu Wang, Hao Wang, Chun Tao Gu
    Current Microbiology.2025;[Epub]     CrossRef
  • Genome-guided development of a bacterial two-strain system for low-temperature soil biocementation
    Karol Ciuchcinski, Grzegorz Czerwonka, Przemyslaw Decewicz, Zofia Godlewska, Katarzyna Misiolek, Katarzyna Zegadlo, Michal Styczynski, Lukasz Dziewit
    Applied Microbiology and Biotechnology.2025;[Epub]     CrossRef
  • Familial Reclassification Within Order Lysobacterales and Proposal of Four Novel Species
    Tengfei Ma, Haijiao Liu, Yafei Chen, Juan Liu, Chungen Piao, Han Xue, Risheng Xu, Yong Li
    Microorganisms.2025; 13(6): 1212.     CrossRef
  • Draft genome sequences of Thermus thermophilus strains isolated from Japanese hot springs
    Yu Sato, Masanori Hashino, Shintaro Maeno, Elinne Becket
    Microbiology Resource Announcements.2025;[Epub]     CrossRef
  • Structural basis of the catalytic and allosteric mechanism of bacterial acetyltransferase PatZ
    Jun Bae Park, Gwanwoo Lee, Yu-Yeon Han, Dongwook Kim, Kyoo Heo, Jeesoo Kim, Juhee Park, Hyosuk Yun, Chul Won Lee, Hyun-Soo Cho, Jong-Seo Kim, Martin Steinegger, Yeong-Jae Seok, Soung-Hun Roh
    Proceedings of the National Academy of Sciences.2025;[Epub]     CrossRef
  • Lacticaseibacillus suihuaensis sp. nov., Isolated from Traditional Chinese Pickle
    Xin-Yu Zhu, Chun Yan Li, Hao Wang, Chun Tao Gu
    Current Microbiology.2025;[Epub]     CrossRef
  • Idiomarina aminovorans sp. nov., a halophilic bacterium isolated from the Llamara salt pan in the Atacama Desert of northern Chile
    Christian Hintersatz, Luis Antonio Rojas, Sean Ting-Shyang Wei, Sabine Kutschke, Angela Thewes, Falk Lehmann, Rohan Jain, Katrin Pollmann
    Extremophiles.2025;[Epub]     CrossRef
  • Design of genus-specific semi-nested primers for simple and accurate identification of Enterobacter strains
    Sara Jordan, Joël F. Pothier, Pieter de Maayer, Kirk Broders, Brian H. Kvitko, Teresa A. Coutinho, Theo H. M. Smits
    BMC Microbiology.2025;[Epub]     CrossRef
  • Single cell viral tagging of Faecalibacterium prausnitzii reveals rare bacteriophages omitted by other techniques
    Danielle E. Campbell, Xiaofen Wu, Lindsey R. Hall, Dylan Lawrence, Jerome M. Molleston, Lawrence A. Schriefer, Lindsay Droit, James S. Weagley, Benjamin S. Olson, Joanna Rimmer, Miles Parkes, Scott A. Handley, Megan T. Baldridge
    Gut Microbes.2025;[Epub]     CrossRef
  • Lacticaseibacillus salsurae sp. nov. and Levilactobacillus muriae sp. nov., isolated from traditional Chinese pickle
    Si-Tong Song, Ting-Yu Wang, Xin-Yu Zhu, Chun Tao Gu
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Taxonomic rearrangement of Salinibacterium, Leifsonia, Diaminobutyricibacter, Antiquaquibacter, Homoserinimonas and Glaciibacter: refining genus boundaries and proposal of two new genera – Orlajensenia gen. nov. and Leifsonella gen. nov.
    Maher Gtari, Dhouha Boussoufa, Faten Ghodhbane-Gtari, Imed Sbissi
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Bacteroides celer sp. nov. and Bacteroides mucinivorans sp. nov., isolated from human feces, and the reclassification of Bacteroides koreensis Shin et al. 2017 and Bacteroides kribbi Shin et al. 2017 as later heterotypic synonyms of Bacteroides ovatus Egg
    Ah-In Yang, Bora Kim, Woorim Kang, Hae-In Joe, Na-Ri Shin
    Journal of Microbiology.2025; 63(6): e2502006.     CrossRef
  • Pseudomonas lyxosi sp. nov., Pseudomonas arabinosi sp. nov. and Pseudomonas frigoris sp. nov., isolated from glaciers
    Chan Zhao, Yu-Hua Xin, Qing Liu
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Paenibacillus nanchangensis sp. nov., a Nitrogen-Fixing Strain Isolated from Agricultural Soil
    Yan Wu, Leyun Dong, Bingbing Weng, Xiaozhen Shi, Ningning Wu, Jian He, Zongzhuan Shen, Jiandong Jiang, Qirong Shen
    Current Microbiology.2025;[Epub]     CrossRef
  • Unicore Enables Scalable and Accurate Phylogenetic Reconstruction with Structural Core Genes
    Dongwook Kim, Sukhwan Park, Martin Steinegger, Caroline zz Puente-Lelievre
    Genome Biology and Evolution.2025;[Epub]     CrossRef
  • Haloimpatiens sporogenes sp. nov. and Haloimpatiens myeolchijeotgali sp. nov., anaerobic bacteria isolated from Myeolchi-jeot, a traditional Korean fermented anchovy
    Yu Jeong Lee, Byung Hee Chun
    Journal of Microbiology.2025; 63(7): e2504009.     CrossRef
  • Ewingella docleensis sp. nov. isolated from artisanal Montenegrin komanski cheese
    Beatriz Daza Prieto, Nadja Raicevic, Patrick Hyden, Adriana Cabal, Johann Ladstätter, Susanne Richter, Anna Stoeger, Robert L. Mach, Aleksandra Martinovic, Werner Ruppitsch
    The Microbe.2025; 8: 100449.     CrossRef
  • Faecalibacterium langellae sp. nov. isolated from human faeces
    Adeline Ang, Véronique Robert, Atsushi Hisatomi, Masahiro Hirasaki, Shintaro Maeno, Moriya Ohkuma, Mitsuo Sakamoto, Jean-Marc Chatel, Akihito Endo
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Genome-based reclassification of the genus Lactococcus and two novel species Pseudolactococcus yaeyamensis gen. nov., sp. nov. and Lactovum odontotermitis sp. nov. isolated from the gut of termites
    Kota Abe, Masahiro Yuki, Yumiko Imagawa, Atsushi Hisatomi, Moriya Ohkuma, Mitsuo Sakamoto, Satoko Noda
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Genome-Wide Insights into Streptomyces Novel Species Qhu-G9 and Its Potential for Enhancing Salt Tolerance and Growth in Avena sativa L. and Onobrychis viciifolia Scop
    Xin Xiang, Xiaolan Ma, Hengxia Yin, Liang Chen, Jiao Li, Wenjing Li, Shuhan Zhang, Chenghang Sun, Benyin Zhang
    Plants.2025; 14(14): 2135.     CrossRef
  • Bradyrhizobium tunisiense sp. nov., a novel rhizobial species isolated from Acacia saligna nodules
    Jihed Hsouna, Houda Zouagui, Takwa Gritli, Houda Ilahi, Jia-Cheng Han, Muhammad Sulman, Walid Ellouze, Xiao Xia Zhang, Maroua Mansouri, Mustapha Missbah El Idrissi, Soufiane Alami, Pierre Emmanuel Courty, Daniel Wipf, Abdelkader Bekki, James T. Tambong, B
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Distribution of Iron Importers and Ecological Traits in Pseudomonas Species Highlights the Potential Role of Efe System in Plant‐Related Environments
    Kenji Okumura, Kohei Ogura, Wataru Hashimoto
    Environmental Microbiology.2025;[Epub]     CrossRef
  • Genetic Characterization and Symbiotic Performance of Soybean Rhizobia Under Cold and Water-Deficient Conditions in Poland
    Riku Watanabe, Maria Daniela Artigas Ramirez, Shin-ichiro Agake, Sonoko Dorothea Bellingrath-Kimura, Sylwia Lewandowska, Yuki Onishi, Yohei Nishikawa, Haruko Takeyama, Michiko Yasuda, Naoko Ohkama-Ohtsu
    Plants.2025; 14(12): 1786.     CrossRef
  • Fulvimonas Volatilium sp. nov., Isolated from the Volatile Organic Compounds Treatment System
    Shaofeng Zhou, Yanjin Li, Tongchu Deng, Ling Zhang, Meiying Xu
    Current Microbiology.2025;[Epub]     CrossRef
  • Reclassification of Pseudomonas boreopolis Gray and Thornton 1928 (Approved Lists 1980) as Xanthomonas boreopolis comb. nov. and Pseudomonas carboxydohydrogena (ex Sanjieva and Zavarzin 1971) Meyer et al. 1980 as Afipia carboxydohydrogena comb. nov. based
    Mehdi Fatahi-Bafghi
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Comprehensive genomic analysis of Sinorhizobium meliloti isolates associated with fenugreek (Trigonella foenum-graecum Linn.) from diverse agroclimatic regions of India
    Mitesh Khairnar, Saleh S. Alhewairini, Swapnil Chandrakant Kajale, Vagish Dwibedi, Jayanthi Barasarathi, Andrea Mastinu, Riyaz Sayyed
    Chemical and Biological Technologies in Agriculture.2025;[Epub]     CrossRef
  • Aureibaculum koreense sp. nov. and Aureibaculum conchae sp. nov., isolated from the marine molluscs
    Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Genome-based classification of Paraniabella aurantiaca gen. nov., sp. nov., isolated from soil and taxonomic reclassification of five species within the genus Niabella
    Yong-Seok Kim, Yerang Yang, Miryung Kim, Do-Hoon Lee, Chang-Jun Cha
    Journal of Microbiology.2025; 63(10): e2505005.     CrossRef
  • Ruegeria discodermiae sp. nov., Ruegeria jejuensis sp. nov., and Ruegeria hyattellae sp. nov., Isolated from Marine Sponges
    Yea-Lin Moon, Kyung Hyun Kim, Ji-Yoon Shin, Jin-Sook Park
    Current Microbiology.2025;[Epub]     CrossRef
  • Unexplored diversity and potential functions of extra-chromosomal elements
    Haoyu Liu, Jia Sun, JuanJuan Si, Yi Liao, Jiaqi Bai, Xia Li, Limin Wang, Kuojun Cai, Wei Ni, Ping Zhou, Shengwei Hu, Juliette Hayer
    mSystems.2025;[Epub]     CrossRef
  • Microbulbifer discodermiae sp. nov. and Microbulbifer jejuensis sp. nov., isolated from marine sponges
    Yea-Lin Moon, Jin-Sook Park
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • A Horizontally Transferred Alginate Metabolism Gene Cluster in the Human Gut Genus Bacteroides
    Yuki Miyamoto, Natsuko Katsuhiro, Kenji Okumura, Ryuichi Takase, Daisuke Watanabe, Kohei Ogura, Wataru Hashimoto
    Journal of Applied Glycoscience.2025; 72(4): n/a.     CrossRef
  • Lactiplantibacillus koreensis sp. nov. and Lactiplantibacillus kimchii sp. nov., isolated from kimchi, a traditional Korean fermented food
    Min Ji Lee, Jisu Lee, Sohee Nam, Mi-Ja Jung, Yeon Bee Kim, Yujin Kim, Jeong Ui Yun, Seong Woon Roh, Tae Woong Whon, Che Ok Jeon, Se Hee Lee
    Journal of Microbiology.2025; 63(11): e2507007.     CrossRef
  • Comparative genome analysis of the Sphaerotilus-Leptothrix group supports the unification of the genera Sphaerotilus and Leptothrix into a single emended genus Sphaerotilus
    Dmitry D. Smolyakov, Alexey V. Beletsky, Tatyana S. Rudenko, Maria V. Gureeva, Nikolai V. Ravin, Margarita Y. Grabovich
    Systematic and Applied Microbiology.2025; 48(6): 126666.     CrossRef
  • Paraburkholderia suaedae sp. nov., a Potential Plant Growth-Promoting Bacterium Isolated from the Halophyte Suaeda japonica
    Sunho Park, Hyunji Lee, Subin Yook, Chunghwan Baek, Jisu Kim, Seunghui Kwak, Taeho Na, Taegun Seo
    Microorganisms.2025; 13(11): 2498.     CrossRef
  • Acquisition of novel antibiotic resistance genes by the bacterial predator Bacteriovorax sp. As-1
    Fathrinah Binti Kohadie, Young-Ung Heo, Wonsik Mun, Sumin Choi, Sinseong Park, Yoonhang Lee, Do-Hyung Kim, Robert J Mitchell
    The ISME Journal.2025;[Epub]     CrossRef
  • Four novel species of the genus Aquimarina isolated from marine sponges: Aquimarina callyspongiae sp. nov., Aquimarina mycalae sp. nov., Aquimarina discodermiae sp. nov., and Aquimarina penaris sp. nov
    Yea-Lin Moon, Seung-Min Han, Kyung Hyun Kim, Jin-Sook Park
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Genomic characterisation and gene editing of Marinibacterium sp. CCB-SX1 as a new marine chassis for polyhydroxyalkanoate production
    Sixu Gong, Noorizan Miswan, Nur Hanani Arif Shah, Siti Nor Syairah Anis, Amirul Al-Ashraf Abdullah, Nyok-Sean Lau
    International Journal of Biological Macromolecules.2025; 334: 149133.     CrossRef
  • Whole-genome sequencing of Nocardiopsis sp. B33, an alkali-halo-tolerant and moderately thermotolerant plant growth-promoting strain from Algerian Saharan soil: an in vitro and in silico study
    Noureddine Bouras, Mónica Majo-Cuervo, Atika Meklat, Lorena Carro, Affaf Laassami, Esther Menéndez, Imen Nouioui
    Biocatalysis and Agricultural Biotechnology.2025; 70: 103829.     CrossRef
  • Phylogenomic insights into a psychrotolerant, plant growth-promoting strain of Pseudomonas marginalis isolated from Xinantécatl volcano
    José Germán Serrano-Gamboa, José Tomás Tavarez-Arriaga, Mario L. Iza-Arteaga, Martín Romualdo Ide-Pérez, Irán Tapia-Vázquez, Jorge L. Folch-Mallol
    Gene Reports.2025; 41: 102356.     CrossRef
  • Comparative Genomics of DH5α-Inhibiting Escherichia coli Isolates from Feces of Healthy Individuals Reveals Common Co-Occurrence of Bacteriocin Genes with Virulence Factors and Antibiotic Resistance Genes
    Shuan Er, Yichen Ding, Linda Wei Lin Tan, Yik Ying Teo, Niranjan Nagarajan, Henning Seedorf
    Antibiotics.2025; 14(9): 860.     CrossRef
  • Longitudinal gut microbiota tracking reveals the dynamics of horizontal gene transfer
    Haoran Peng, Sergio Andreu-Sanchez, Angel J. Ruiz-Moreno, Asier Fernández-Pato, Jiafei Wu, Ranko Gacesa, Alexandra Zhernakova, Daoming Wang, Jingyuan Fu
    Nature Communications.2025;[Epub]     CrossRef
  • Variovorax arabinosiphilus sp. nov., Variovorax flavidus sp. nov., Variovorax gracilis sp. nov., Variovorax brevis sp. nov., Variovorax jilinensis sp. nov., Variovorax davisae sp. nov., Variovorax saccharolyticus sp. nov. and Variovorax fucos
    Yu-Hang Jiang, Ce-Ce Yin, Lei-Lei Yang, Yu-Hua Xin, Qing Liu, Jian Ye
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Rubrivirga aquatilis sp. nov. and Rubrivirga halophila sp. nov., isolated from Korean coastal surface seawater
    Jisoo Han, Yeonjung Lim, Mirae Kim, Jang-Cheon Cho
    Journal of Microbiology.2025; 63(8): e2504017.     CrossRef
  • Maribacter algae sp. nov., Maribacter spongiae sp. nov., Maribacter corallii sp. nov., Maribacter aquimarinus sp. nov. and Maribacter taeanensis sp. nov., isolated from marine habitats in the Republic of Korea
    Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Streptomyces shinuiensis sp. nov., a Salternamides-Producing Bacterium Isolated from Saltern Sediment
    Yeonjung Lim, Ye-Eun Moon, Mirae Kim, Jayho Lee, Dong-Chan Oh, Jang-Cheon Cho
    Journal of Microbiology and Biotechnology.2025;[Epub]     CrossRef
  • Vibrio sabulosilitoris sp. nov., a novel marine bacterium in the Agarivorans clade within the family Vibrionaceae, isolated from a sandy beach in Fukui, Japan
    Yuka Machii, Karen Tsukiyama, Takafumi Kataoka, Ryuji Kondo
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Bulleidia extructa PP_925: Genome Reduction, Minimalist Metabolism, and Evolutionary Insights into Firmicutes Diversification
    Peter V. Evseev, Irina V. Podoprigora, Andrei V. Chaplin, Zurab S. Khabadze, Artem A. Malkov, Lyudmila I. Kafarskaia, Dmitriy A. Shagin, Yulia N. Urban, Olga Yu. Borisova, Boris A. Efimov
    International Journal of Molecular Sciences.2025; 27(1): 448.     CrossRef
  • The Isolation and Characterization of a Novel Psychrotolerant Cellulolytic Bacterium, Microbacterium sp. QXD-8T
    Peng An, Changjialian Yang, Wei Li, Dahe Zhao, Hua Xiang
    Microorganisms.2024; 12(2): 303.     CrossRef
  • Isolation of highly copper-resistant bacteria from deep-sea hydrothermal fields and description of a novel species Marinobacter metalliresistant sp. nov
    Tong Yu, Meng Qin, Zongze Shao, Yuemei Zhao, Xiang Zeng
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Phenazines are involved in the antagonism of a novel subspecies of Pseudomonas chlororaphis strain S1Bt23 against Pythium ultimum
    Sylvia I. Chi, Mercy Akuma, Renlin Xu, Véronique Plante, Mehri Hadinezhad, James T. Tambong
    Scientific Reports.2024;[Epub]     CrossRef
  • Isoptericola haloaureus sp. nov., a dimorphic actinobacterium isolated from mangrove sediments of southeast India, implicating biosaline agricultural significance through nitrogen fixation and salt tolerance genes
    Munisamy Prathaban, Ragothaman Prathiviraj, Mythili Ravichandran, Sharmila Devi Natarajan, Murugesan Sobanaa, S. Hari Krishna Kumar, Varadharaju Chandrasekar, Joseph Selvin
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Azotosporobacter soli gen. nov., sp. nov., a novel nitrogen-fixing bacterium isolated from paddy soil
    Cheng-Jie Xie, Ling Yao, Rong Tang, Shuang Han, Shang Yang, Hend Alwathnani, Christopher Rensing, Guo-Hong Liu, Shun-Gui Zhou
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Veillonella faecalis sp. nov., a propionic acid-producing bacterium isolated from the faeces of an infant
    Haneol Yang, Hana Jo, Seung Hyun Kim, Chan-Seok Yun, Seung-Hwan Park, Doo-Sang Park
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Rhizobium hidalgonense and Rhizobium redzepovicii as faba bean (Vicia faba L.) microsymbionts in Mexican soils
    Flor N. Rivera Ortuña, Joseph Guevara-Luna, Jun Yan, Eloisa Lopez Amezcua, Ivan Arroyo-Herrera, Yan Li, Maria Soledad Vásquez-Murrieta, Danae Rojas Arellano, En Tao Wang
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Chitiniphilus purpureus sp. nov., a novel chitin-degrading bacterium isolated from crawfish pond sediment
    Kaiyang Li, Xiong Luo, Rongrong Fan, Zhuoran Ding, Shixue Zheng, Zhengjun Chen
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Augmenting bacterial similarity measures using a graph-based genome representation
    Vivek Ramanan, Indra Neil Sarkar, Sergio Baranzini
    mSystems.2024;[Epub]     CrossRef
  • Flavobacterium rivulicola sp. nov., Isolated from a Freshwater Stream
    Sumin Kim, Miri S. Park, Ilnam Kang, Jang-Cheon Cho
    Current Microbiology.2024;[Epub]     CrossRef
  • The genome of a new Halorubrum distributum strain ICIS4 isolated from the culture of a microalga Dunaliella salina
    Е. А. Selivanova, А. S. Balkin, Yu. А. Khlopko, V. Ya. Kataev, А. О. Plotnikov
    Microbiology.2024; 93(4): 444.     CrossRef
  • Biological Control of Streptomyces sp. PR69 Against Phytophthora capsici and Its Growth-Promoting Effects on Plants
    Perla Karina López-Reyes, Susana De la Torre-Zavala, María Mercedes Cortés-González, Luis Jesús Galán-Wong, Hamlet Avilés-Arnaut
    Horticulturae.2024; 10(12): 1365.     CrossRef
  • Pectobacterium punjabense Causing Blackleg and Soft Rot of Potato: The First Report in the Russian Federation
    Anna A. Vasilyeva, Peter V. Evseev, Alexandr N. Ignatov, Fevzi S.-U. Dzhalilov
    Plants.2024; 13(15): 2144.     CrossRef
  • Taxonogenomic analysis of the Xanthomonas translucens complex leads to the descriptions of Xanthomonas cerealis sp. nov. and Xanthomonas graminis sp. nov.
    James T. Tambong, Renlin Xu, Maria Constanza Fleitas, Randy Kutcher
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Parendozoicomonas callyspongiae sp. nov. Isolated from a Marine Sponge, Callyspongia elongate, and Reclassification of Sansalvadorimonas verongulae as Parendozoicomonas verongulae comb. nov.
    Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
    Current Microbiology.2024;[Epub]     CrossRef
  • Congregibacter variabilis sp. nov. and Congregibacter brevis sp. nov. Within the OM60/NOR5 Clade, Isolated from Seawater, and Emended Description of the Genus Congregibacter
    Hyeonsu Tak, Miri S. Park, Hyerim Cho, Yeonjung Lim, Jang-Cheon Cho
    Journal of Microbiology.2024; 62(9): 739.     CrossRef
  • Analysis of Whole-Genome facilitates rapid and precise identification of fungal species
    Guihong Qi, Lijun Hao, Tianyi Xin, Yutong Gan, Qian Lou, Wenjie Xu, Jingyuan Song
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Transformation of hydroxylated polychlorinated biphenyls by bacterial 2-hydroxybiphenyl 3-monooxygenase
    Jachym Suman, Kamila Sredlova, Serena Fraraccio, Martina Jerabkova, Michal Strejcek, Hana Kabickova, Tomas Cajthaml, Ondrej Uhlik
    Chemosphere.2024; 349: 140909.     CrossRef
  • Commensalibacter nepenthis sp. nov. and Commensalibacter oyaizuii sp. nov., from fluid in a Nepenthes pitcher cup and a butterfly (Junonia lemonias) in Thailand
    Pattaraporn Yukphan, Piyanat Charoenyingcharoen, Supattra Muangham, Wuttichai Mhuantong, Yuzo Yamada
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Lapidilactobacillus salsurivasis sp. nov., Secundilactobacillus muriivasis sp. nov., and Streptococcus parasalivarius sp. nov., isolated from Traditional Chinese Pickle
    Ting-Yu Wang, Chun Yan Li, Hao Wang, Chun Tao Gu
    Current Microbiology.2024;[Epub]     CrossRef
  • Comparative pangenome analysis of Enterococcus faecium and Enterococcus lactis provides new insights into the adaptive evolution by horizontal gene acquisitions
    Dae Gyu Choi, Ju Hye Baek, Dong Min Han, Shehzad Abid Khan, Che Ok Jeon
    BMC Genomics.2024;[Epub]     CrossRef
  • Staphylococcus hsinchuensis sp. nov., Isolated from Soymilk
    Yu-Ting Wang, Yu-Chun Lin, Yi-Huei Hsieh, Yu-Tzu Lin, Moriyuki Hamada, Chih-Chieh Chen, Jong-Shian Liou, Ai-Yun Lee, Wei-Ling Zhang, Yung-Tsung Chen, Chien-Hsun Huang
    Pathogens.2024; 13(4): 343.     CrossRef
  • Update on the proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
    Raúl Riesco, Martha E. Trujillo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Rhizobium aouanii sp. nov., efficient nodulating rhizobia isolated from Acacia saligna roots in Tunisia
    Jihed Hsouna, Takwa Gritli, Houda Ilahi, Jia-Cheng Han, Walid Ellouze, Xiao Xia Zhang, Maroua Mansouri, Praveen Rahi, Mustapha Missbah El Idrissi, Mouad Lamrabet, Pierre Emmanuel Courty, Daniel Wipf, Abdelkader Bekki, James T. Tambong, Bacem Mnasri
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Paralimibaculum aggregatum gen. nov. sp. nov. and Biformimicrobium ophioploci gen. nov. sp. nov., two novel heterotrophs from brittle star Ophioplocus japonicus
    Keisuke Kawano, Tatsuya Awano, Arata Yoshinaga, Junji Sugiyama, Shigeki Sawayama, Satoshi Nakagawa
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Characterization and Genomic Analysis of Affinirhizobium gouqiense sp. nov. Isolated from Seawater of Gouqi Island Located in the East China Sea and Reclassification of Rhizobium lemnae to the Genus Affinirhizobium as Affinirhizobium lemnae comb. nov.
    Min He, Gen Chen, Ke-Jing Li, Xing-Xing Tang, Xiao-Xiao Liu, Chang-Bin Ren, Hou-Hong Liu, Hai Luo, Sanjit Chandra Debnath, Pin-Mei Wang, Hai-Xin Chen, Dao-Qiong Zheng
    Current Microbiology.2024;[Epub]     CrossRef
  • Eubacterium album sp. nov., a butyrate-producing bacterium isolated from faeces of a healthy human
    Feng-Lan Liu, Rashidin Abdugheni, Cong-Guo Ran, Nan Zhou, Shuang-Jiang Liu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Lentzea sokolovensis sp. nov., Lentzea kristufekii sp. nov. and Lentzea miocenica sp. nov., rare actinobacteria from Miocene lacustrine sediment of the Sokolov Coal Basin, Czech Republic
    Ana Catalina Lara, Lucie Kotrbová, Moritz Keller, Imen Nouioui, Meina Neumann-Schaal, Yvonne Mast, Alica Chroňáková
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Rhodoferax potami sp. nov. and Rhodoferax mekongensis sp. nov., isolated from the Mekong River in Thailand
    Supattra Kitikhun, Piyanat Charoenyingcharoen, Paopit Siriarchawatana, Somsak Likhitrattanapisal, Thanyakorn Nilsakha, Amonwan Chanpet, Sukanya Jeennor, Pattaraporn Yukphan, Supawadee Ingsriswang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Thalassotalea aquiviva sp. nov., and Thalassotalea maritima sp. nov., Isolated from Seawater of the Coast in South Korea
    Jina Lee, Seung-Hui Song, Kira Moon, Nakyeong Lee, Sangdon Ryu, Hye Seon Song, Sung Moon Lee, Yun Ji Kim, Se Won Chun, Kyung-Min Choi, Aslan Hwanhwi Lee
    Journal of Microbiology.2024; 62(12): 1099.     CrossRef
  • Genome Sequencing Unveils Nomadic Traits of Lactiplantibacillus plantarum in Japanese Post-Fermented Tea
    Kyoka Sato, Yuichiro Ikagawa, Ryo Niwa, Hiroki Nishioka, Masanori Horie, Hitoshi Iwahashi
    Current Microbiology.2024;[Epub]     CrossRef
  • Effects of Limosilactobacillus reuteri strains PTA-126787 and PTA-126788 on intestinal barrier integrity and immune homeostasis in an alcohol-induced leaky gut model
    Dharanesh Gangaiah, Min Gu, Aline Zaparte, Olaf Will, Laurie C. Dolan, Anthony Goering, Jason Pillai, Shrinivasrao P. Mane, German Plata, Emily B. Helmes, David A. Welsh, Arvind Kumar Mahajan
    Scientific Reports.2024;[Epub]     CrossRef
  • Genome-guided isolation of the hyperthermophilic aerobe Fervidibacter sacchari reveals conserved polysaccharide metabolism in the Armatimonadota
    Nancy O. Nou, Jonathan K. Covington, Dengxun Lai, Xavier Mayali, Cale O. Seymour, Juliet Johnston, Jian-Yu Jiao, Steffen Buessecker, Damon Mosier, Alise R. Muok, Nicole Torosian, Allison M. Cook, Ariane Briegel, Tanja Woyke, Emiley Eloe-Fadrosh, Nicole Sh
    Nature Communications.2024;[Epub]     CrossRef
  • Isolation of Sphingopyxis kveilinensis sp. nov., a Potential Antibiotic-Degrading Bacterium, from a Karst Wetland
    Ying Chen, Jie Deng, Chengjian Yu
    Current Microbiology.2024;[Epub]     CrossRef
  • Transmission and Persistence of Infant Gut-Associated Bifidobacteria
    Margaret A. Hilliard, David A. Sela
    Microorganisms.2024; 12(5): 879.     CrossRef
  • The Type Strain of Bifidobacterium indicum Scardovi and Trovatelli 1969 (Approved Lists 1980) is ATCC 25912, not DSM 20214, and Rejection to Reclassify Bifidobacterium coryneforme as Bifidobacterium indicum
    Cheng-Shan Jiang, Chun Yan Li, Chun Tao Gu
    Current Microbiology.2024;[Epub]     CrossRef
  • Cultivation of deep-sea bacteria from the Northwest Pacific Ocean and characterization of Limnobacter profundi sp. nov., a phenol-degrading bacterium
    Mirae Kim, Jaeho Song, Seung Yeol Shin, Kazuhiro Kogure, Ilnam Kang, Jang-Cheon Cho
    Frontiers in Marine Science.2024;[Epub]     CrossRef
  • Faecalibacterium taiwanense sp. nov., isolated from human faeces
    Jong-Shian Liou, Wei-Ling Zhang, Li-Wen Hsu, Chih-Chieh Chen, Yu-Ting Wang, Koji Mori, Kohei Hidaka, Moriyuki Hamada, Lina Huang, Koichi Watanabe, Chien-Hsun Huang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Mesorhizobium retamae sp. nov., a novel non-nodulating and non-nitrogen-fixing species isolated from the root nodules of Retama raetam sampled in Tunisia
    Roukaya Ben Gaied, Imed Sbissi, Mohamed Tarhouni, Katharina Huber, Jacqueline Wolf, Meina Neumann-Schaal, Imen Nouioui, Faten Ghodhbane-Gtari, Maher Gtari
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Genomic and phenotypic characterization of 26 novel marine bacterial strains with relevant biogeochemical roles and widespread presence across the global ocean
    Xavier Rey-Velasco, Teresa Lucena, Ana Belda, Josep M. Gasol, Olga Sánchez, David R. Arahal, María J. Pujalte
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Lacticaseibacillus jixiensis sp. nov., Isolated from Traditional Chinese Pickle
    Si-Tong Song, Chun Yan Li, Chun Tao Gu
    Current Microbiology.2024;[Epub]     CrossRef
  • Paracoccus spongiarum sp. nov., isolated from the marine sponge, Phakellia elegans
    Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Saccharopolyspora mangrovi sp. nov., a novel mangrove soil actinobacterium with distinct metabolic potential revealed by comparative genomic analysis
    Yi-Ting Lu, Yi-Yi Wu, Ya-Nan Li, Wei-Yi Zheng, Wen-Zheng Liu
    Archives of Microbiology.2024;[Epub]     CrossRef
  • The Genome of a New Halorubrum distributum Strain ICIS4 Isolated from the Culture of a Microalga Dunaliella salina
    E. A. Selivanova, A. S. Balkin, Yu. A. Khlopko, V. Ya. Kataev, A. O. Plotnikov
    Microbiology.2024; 93(4): 482.     CrossRef
  • Luteibacter sahnii sp. nov., A Novel Yellow-Colored Xanthomonadin Pigment Producing Probiotic Bacterium from Healthy Rice Seed Microbiome
    Gagandeep Jaiswal, Rekha Rana, Praveen Kumar Nayak, Rekha Chouhan, Sumit G. Gandhi, Hitendra K. Patel, Prabhu B. Patil
    Current Microbiology.2024;[Epub]     CrossRef
  • Genomic analysis of the class Phycisphaerae reveals a versatile group of complex carbon-degrading bacteria
    Wouter B. Lenferink, Theo A. van Alen, Mike S. M. Jetten, Huub J. M. Op den Camp, Maartje A. H. J. van Kessel, Sebastian Lücker
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Analysis of Whole-Genome for Identification of Seven Penicillium Species with Significant Economic Value
    Yuanhao Huang, Lianguo Fu, Yutong Gan, Guihong Qi, Lijun Hao, Tianyi Xin, Wenjie Xu, Jingyuan Song
    International Journal of Molecular Sciences.2024; 25(15): 8172.     CrossRef
  • Jatrophihabitans cynanchi sp. nov., isolated from rhizosphere soil of Cynanchum wilfordii
    Min Kuk Suh, Ji-Sun Kim, Mi Kyung Eom, Han Sol Kim, Hyo Eun Do, Yong Kook Shin, Jung- Sook Lee
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Helicovermis profundi gen. nov., sp. nov., a novel mesophilic, asporogenous bacterium within the Clostridia isolated from a deep-sea hydrothermal vent chimney
    Urara Miyazaki, Daiki Mizutani, Yurina Hashimoto, Akihiro Tame, Shigeki Sawayama, Junichi Miyazaki, Ken Takai, Satoshi Nakagawa
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Patterns of Change in Nucleotide Diversity Over Gene Length
    Farhan Ali, Brian Golding
    Genome Biology and Evolution.2024;[Epub]     CrossRef
  • SeqCode facilitates naming of South African rhizobia left in limbo
    Melandré van Lill, Stephanus N. Venter, Esther K. Muema, Marike Palmer, Wai Y. Chan, Chrizelle W. Beukes, Emma T. Steenkamp
    Systematic and Applied Microbiology.2024; 47(2-3): 126504.     CrossRef
  • Bifidobacterium apicola sp. nov., isolated from the gut of honeybee (Apis mellifera)
    Ting-Yu Wang, Hao Wang, Chun Tao Gu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Detecting horizontal gene transfer among microbiota: an innovative pipeline for identifying co-shared genes within the mobilome through advanced comparative analysis
    Jana Schwarzerova, Michal Zeman, Vladimir Babak, Katerina Jureckova, Marketa Nykrynova, Margaret Varga, Wolfram Weckwerth, Monika Dolejska, Valentine Provaznik, Ivan Rychlik, Darina Cejkova, Feng Gao, Johannes Wöstemeyer, Shay Tal, Alejandro Piña-Iturbe,
    Microbiology Spectrum.2024;[Epub]     CrossRef
  • Host genetic regulation of human gut microbial structural variation
    Daria V. Zhernakova, Daoming Wang, Lei Liu, Sergio Andreu-Sánchez, Yue Zhang, Angel J. Ruiz-Moreno, Haoran Peng, Niels Plomp, Ángela Del Castillo-Izquierdo, Ranko Gacesa, Esteban A. Lopera-Maya, Godfrey S. Temba, Vesla I. Kullaya, Sander S. van Leeuwen, R
    Nature.2024; 625(7996): 813.     CrossRef
  • Uncovering the lignin-degrading potential of Serratia quinivorans AORB19: insights from genomic analyses and alkaline lignin degradation
    Nadia Sufdar Ali, Subarna Thakur, Mengwei Ye, Fanny Monteil-Rivera, Youlian Pan, Wensheng Qin, Trent Chunzhong Yang
    BMC Microbiology.2024;[Epub]     CrossRef
  • Taxonomic note on Kocuria and Rothia: taxogenomic insights for addressing misidentifications and proposing new combinations and new subspecies
    Faten Ghodhbane-Gtari, Mohamed Aziz Haj Nasr, Rafik Gatri, Maher Gtari
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Chengkuizengella axinellae sp. nov., a symbiotic bacterium isolated from a marine sponge of the genus Axinella
    Yea-Lin Moon, Kyung Hyun Kim, Jin-Sook Park
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Adlercreutzia faecimuris sp. nov., producing propionate and acetate isolated from mouse feces
    Min Kuk Suh, Jong- Sik Jin, Hyo Eun Do, Ji-Sun Kim, Mi Kyung Eom, Han Sol Kim, Jung- Sook Lee
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Xanthomonas chitinilytica sp. nov., a novel chitinolytic bacterium isolated from a microbial fermentation bed material
    Xiaodong Liu, Xin Liu, Zhenshan Deng, Xiaolong He, Yingying Jiang
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Kribbella caucasensis sp. nov. from the Soil of the North Caucasus Mountains
    A. N. Avtukh, E. V. Ariskina, L. M. Baryshnikova, N. V. Prisyazhnaya, L. V. Dorofeeva, L. I. Evtushenko
    Microbiology.2024; 93(6): 730.     CrossRef
  • Peptostreptococcus equinus sp. nov., isolated from horse faeces
    Hye Su Jung, Jeong Ui Yun, Mi-Ja Jung, Hye Seon Song, Yeon Bee Kim, Yujin Kim, Min Ji Lee, Jisu Lee, Che Ok Jeon, Seong Woon Roh, Tae Woong Whon, Joon-Gyu Kim, Se Hee Lee
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Aurantiacibacter poecillastricola sp. nov., Isolated from the Marine Sponge, Poecillastra wondoensis, and Reclassification of Erythrobacter alti as Aurantiacibacter alti comb. nov.
    Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
    Journal of Microbiology and Biotechnology.2024;[Epub]     CrossRef
  • Philodulcilactobacillus myokoensis gen. nov., sp. nov., a fructophilic, acidophilic, and agar-phobic lactic acid bacterium isolated from fermented vegetable extracts
    Tomoaki Kouya, Yohei Ishiyama, Shota Ohashi, Ryota Kumakubo, Takeshi Yamazaki, Toshiki Otaki, Guadalupe Virginia Nevárez-Moorillón
    PLOS ONE.2023; 18(6): e0286677.     CrossRef
  • Comparative Genomic Analysis and BTEX Degradation Pathways of a Thermotolerant Cupriavidus cauae PHS1
    Chandran Sathesh-Prabu, Jihoon Woo, Yuchan Kim, Suk Min Kim, Sun Bok Lee, Che Ok Jeon, Donghyuk Kim, Sung Kuk Lee
    Journal of Microbiology and Biotechnology.2023; 33(7): 875.     CrossRef
  • Complete genome sequence of the emerging pathogen Cysteiniphilum spp. and comparative genomic analysis with genus Francisella : Insights into its genetic diversity and potential virulence traits
    Changrui Qian, Mengxin Xu, Zeyu Huang, Miran Tan, Cheng Fu, Tieli Zhou, Jianming Cao, Cui Zhou
    Virulence.2023;[Epub]     CrossRef
  • Psychroserpens ponticola sp. nov. and Marinomonas maritima sp. nov., isolated from seawater
    Sylvia Kristyanto, Jaejoon Jung, Jeong Min Kim, Byeong Jun Choi, Dong Min Han, Sung Chul Lee, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Atopomonas sediminilitoris sp. nov., isolated from beach sediment of Zhairuo Island, China
    Kejing Li, Zhenbo Ye, Gen Chen, Kaiwen Zheng, Jun Yin, Sanjit Chandra Debnath, Cen Yan, Yi Hong, Zhen Guo, Pinmei Wang, Fabai Wu, Daoqiong Zheng
    Antonie van Leeuwenhoek.2023; 116(2): 97.     CrossRef
  • Chryseobacterium paludis sp. nov. and Chryseobacterium foetidum sp. nov. Isolated from the Aquatic Environment, South Korea
    Miryung Kim, Yong-Seok Kim, Chang-Jun Cha
    Journal of Microbiology.2023; 61(1): 37.     CrossRef
  • Paenibacillus soyae sp. nov., isolated from the rhizosphere of soya bean
    Hui Zhao, Yue Su, Qihui Gu, Jumei Zhang, Xinqiang Xie, Qingping Wu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Geothrix oryzisoli sp. nov., a ferric iron-reducing bacterium isolated from paddy soil
    Shuang Han, Rong Tang, Shang Yang, Cheng-Jie Xie, Manik Prabhu Narsing Rao, Christopher Rensing, Guo-Hong Liu, Shun-Gui Zhou
    Antonie van Leeuwenhoek.2023; 116(5): 477.     CrossRef
  • Description of Luteibacter aegosomatis sp. nov., Luteibacter aegosomaticola sp. nov., and Luteibacter aegosomatissinici sp. nov. isolated from the Intestines of Aegosoma sinicum Larvae
    Hae-In Joe, Jee-Won Choi, June-Young Lee, Hojun Sung, Su-Won Jeong, Yun-Seok Jeong, Jae-Yun Lee, Jin-Woo Bae
    Journal of Microbiology.2023; 61(6): 603.     CrossRef
  • Hoeflea algicola sp. nov. and Hoeflea ulvae sp. nov., isolated from phycosphere of marine algae
    Ju Hye Baek, Sylvia Kristyanto, Jeong Min Kim, Dong Min Han, Zhe-Xue Quan, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Muricauda myxillae sp. nov., isolated from a marine sponge (Myxilla rosacea), and reclassification of Flagellimonas hymeniacidonis as Muricauda symbiotica nom. nov.
    Yea-Lin Moon, Kyung-Hyun Kim, Jin-Sook Park
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Description and Genomic Characteristics of Weissella fermenti sp. nov., Isolated from Kimchi
    Jae Kyeong Lee, Ju Hye Baek, Dong Min Han, Se Hee Lee, So Young Kim, Che Ok Jeon
    Journal of Microbiology and Biotechnology.2023; 33(11): 1448.     CrossRef
  • Dyadobacter pollutisoli sp. nov., isolated from plastic waste landfill soil
    Kyeong Ryeol Kim, Jeong Min Kim, Jae Kyeong Lee, Dong Min Han, Lujiang Hao, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • UFCG: database of universal fungal core genes and pipeline for genome-wide phylogenetic analysis of fungi
    Dongwook Kim, Cameron L M Gilchrist, Jongsik Chun, Martin Steinegger
    Nucleic Acids Research.2023; 51(D1): D777.     CrossRef
  • Ancient Rapid Radiation Explains Most Conflicts Among Gene Trees and Well-Supported Phylogenomic Trees of Nostocalean Cyanobacteria
    Carlos J Pardo-De la Hoz, Nicolas Magain, Bryan Piatkowski, Luc Cornet, Manuela Dal Forno, Ignazio Carbone, Jolanta Miadlikowska, François Lutzoni, Claudia Lemus-Solis
    Systematic Biology.2023; 72(3): 694.     CrossRef
  • Zwartia vadi sp. nov., a Novel Species of the GKS98 Cluster Isolated from a Stream, and the Reclassification of ‘Achromobacter Panacis’ as Zwartia panacis comb. nov
    Miri S. Park, Ilnam Kang, Jang-Cheon Cho
    Microorganisms.2023; 11(9): 2150.     CrossRef
  • Comparative genomics reveals environmental adaptability and antimicrobial activity of a novel Streptomyces isolated from soil under black Gobi rocks
    Ying Wen, Binglin Zhang, Gaosen Zhang, Minghui Wu, Ximing Chen, Tuo Chen, Guangxiu Liu, Wei Zhang
    Antonie van Leeuwenhoek.2023; 116(12): 1407.     CrossRef
  • Phylogenomic Insights on the Xanthomonas translucens Complex, and Development of a TaqMan Real-Time Assay for Specific Detection of pv. translucens on Barley
    James T. Tambong, Renlin Xu, Maria Constanza Fleitas, Lipu Wang, Keith Hubbard, Randy Kutcher
    Phytopathology®.2023; 113(11): 2091.     CrossRef
  • Microvirga terrae sp. nov., Isolated from Soil
    Kyung Hyun Kim, Ju Hye Baek, Sang Eun Jeong, Lujiang Hao, Che Ok Jeon
    Current Microbiology.2023;[Epub]     CrossRef
  • Incidence, genetic diversity, and antimicrobial resistance profiles of Vibrio parahaemolyticus in seafood in Bangkok and eastern Thailand
    Chartchai Changsen, Somsak Likhitrattanapisal, Kamonwan Lunha, Wiyada Chumpol, Surasak Jiemsup, Anuphap Prachumwat, Darin Kongkasuriyachai, Supawadee Ingsriswang, Soraya Chaturongakul, Aekarin Lamalee, Suganya Yongkiettrakul, Sureemas Buates
    PeerJ.2023; 11: e15283.     CrossRef
  • Streptomonospora mangrovi sp. nov., isolated from mangrove soil showing similar metabolic capabilities, but distinct secondary metabolites profiles
    Cheng Zhen, Xin-Kai Chen, Xian-Feng Ge, Wen-Zheng Liu
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Alkalicoccobacillus porphyridii sp. nov., isolated from a marine red alga, reclassification of Shouchella plakortidis and Shouchella gibsonii as Alkalicoccobacillus plakortidis comb. nov. and Alkalicoccobacillus gibsonii comb. nov., and emend
    Kyung Hyun Kim, Dong Min Han, Jae Kyeong Lee, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • UACG: Up-to-Date Archaeal Core Genes and Software for Phylogenomic Tree Reconstruction
    Seong-In Na, Michael James Bailey, Mauricio Chalita, Jae Hyoung Cho, Jongsik Chun
    Journal of Microbiology.2023; 61(7): 683.     CrossRef
  • Alishewanella maricola sp. nov., isolated from seawater of the Yellow Sea
    Kyung Hyun Kim, Jeong Min Kim, Hyun Mi Jin, Lujiang Hao, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Cutibacterium equinum sp. nov., isolated from horse faeces
    Jeong Ui Yun, Hye Su Jung, Mi-Ja Jung, Hye Seon Song, Yeon Bee Kim, Yujin Kim, Joon-Gyu Kim, Seong Woon Roh, Se Hee Lee, Jun Sik Lee, Tae Woong Whon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Sugar Concentration, Nitrogen Availability, and Phylogenetic Factors Determine the Ability of Acinetobacter spp. and Rosenbergiella spp. to Grow in Floral Nectar
    José R. Morales-Poole, Clara de Vega, Kaoru Tsuji, Hans Jacquemyn, Robert R. Junker, Carlos M. Herrera, Chris Michiels, Bart Lievens, Sergio Álvarez-Pérez
    Microbial Ecology.2023; 86(1): 377.     CrossRef
  • Silvimonas soli sp. nov., a new member of Chromobacteriaceae isolated from soil in Norrbyskär island, Sweden
    Martina Jerabkova, Tereza Smrhova, Eglantina Lopez-Echartea, Jiri Dresler, Jachym Suman, Gabriela Kapinusova, Tomas Cajthaml, Zdena Skrob, Robin Kyclt, Jonas Fagerman, Michal Strejcek, Ondrej Uhlik
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Actinophytocola gossypii sp. nov. and Streptomyces gossypii sp. nov., two novel actinomycetes isolated from rhizosphere soil of cotton
    Xianfeng Ge, Shenrong Yang, Cheng Zhen, Wenzheng Liu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Phylogenomic analysis of the genus Rosenbergiella and description of Rosenbergiella gaditana sp. nov., Rosenbergiella metrosideri sp. nov., Rosenbergiella epipactidis subsp. epipactidis subsp. nov., Rosenbergiella epipactidis subsp. californiensis subsp.
    Sergio Álvarez-Pérez, Clara de Vega, Kristof Vanoirbeek, Kaoru Tsuji, Hans Jacquemyn, Tadashi Fukami, Chris Michiels, Bart Lievens
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Thermomonas mangrovi sp. nov., isolated from soil of a mangrove nature reserve
    Shanshan Xu, Junpeng Chen, Si Chen, Qiliang Lai, Zengzhi Liu, Ying Xu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Tahibacter soli sp. nov., isolated from soil and Tahibacter amnicola sp. nov., isolated from freshwater
    Ju Hye Baek, Dong Min Han, Jeong Min Kim, Baolei Jia, Ji Young Jung, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Phylogenomic reappraisal of the family Rhizobiaceae at the genus and species levels, including the description of Ectorhizobium quercum gen. nov., sp. nov.
    Tengfei Ma, Han Xue, Chungen Piao, Ning Jiang, Yong Li
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Antarcticirhabdus aurantiaca gen. nov., sp. nov., isolated from Antarctic gravel soil
    Jie Du, Ying Zhang, Di Xin, Yuhua Xin, Jianli Zhang
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Caldimonas mangrovi sp. nov., Isolated from Mangrove Soil
    S. R. Yang, Y. Y. Liu, X. F. Ge, W. Z. Liu
    Microbiology.2023; 92(4): 500.     CrossRef
  • Chitinophaga horti sp. nov., Isolated from Garden Soil
    Dong Min Han, Ju Hye Baek, Dae Gyu Choi, Myeong Seo Jin, Che Ok Jeon
    Current Microbiology.2023;[Epub]     CrossRef
  • Streptomyces pacificus sp. nov., a novel spongiicolazolicin-producing actinomycete isolated from a coastal sediment
    Miku Takahashi, Shoya Shinohara, Moriyuki Hamada, Tomohiko Tamura, Hideo Dohra, Shinya Kodani, Youji Nakagawa, Susumu Kokubo, Masayuki Hayakawa, Hideki Yamamura
    The Journal of Antibiotics.2023; 76(2): 93.     CrossRef
  • MALDI-TOF MS analysis of Burkholderia pseudomallei and closely related species isolated from soils and water in Khon Kaen, Thailand
    Nut Nithimongkolchai, Yothin Hinwan, Benjawan Kaewseekhao, Pisit Chareonsudjai, Pipat Reungsang, Ratthaphol Kraiklang, Sorujsiri Chareonsudjai, Lumyai Wonglakorn, Ploenchan Chetchotisakd, Auttawit Sirichoat, Arnone Nithichanon, Kiatichai Faksri
    Infection, Genetics and Evolution.2023; 116: 105532.     CrossRef
  • Flavobacterium psychrotrophum sp. nov. and Flavobacterium panacagri sp. nov., Isolated from Freshwater and Soil
    Yong-Seok Kim, Eun-Mi Hwang, Chang-Myeong Jeong, Chang-Jun Cha
    Journal of Microbiology.2023; 61(10): 891.     CrossRef
  • VBCG: 20 validated bacterial core genes for phylogenomic analysis with high fidelity and resolution
    Renmao Tian, Behzad Imanian
    Microbiome.2023;[Epub]     CrossRef
  • tilS and rpoB: New Molecular Markers for Phylogenetic and Biodiversity Studies of the Genus Thiothrix
    Nikolai V. Ravin, Dmitry D. Smolyakov, Nikita D. Markov, Alexey V. Beletsky, Andrey V. Mardanov, Tatyana S. Rudenko, Margarita Yu. Grabovich
    Microorganisms.2023; 11(10): 2521.     CrossRef
  • Thermomonas paludicola sp. nov., isolated from a lotus wetland
    Mirae Kim, Miri S. Park, Ilnam Kang, Jang-Cheon Cho
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Octadecabacter algicola sp. nov. and Octadecabacter dasysiphoniae sp. nov., isolated from a marine red alga and emended description of the genus Octadecabacter
    Myeong Seo Jin, Kyung Hyun Kim, Ju Hye Baek, Jeong Min Kim, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Flavihumibacter fluminis sp. nov. and Flavihumibacter rivuli sp. nov., isolated from a freshwater stream
    Miri S. Park, Hyeonuk Sa, Ilnam Kang, Jang-Cheon Cho
    Journal of Microbiology.2022; 60(8): 806.     CrossRef
  • Exploring the genome of Lactobacillaceae spp. Sy-1 isolated from Heterotrigona itama honey
    Syariffah Nuratiqah Syed Yaacob, Fahrul Huyop, Mailin Misson, Roswanira Abdul Wahab, Nurul Huda
    PeerJ.2022; 10: e13053.     CrossRef
  • Micrococcus porci sp. nov., Isolated from Feces of Black Pig (Sus scrofa)
    Ai-Yun Lee, Chia-Hsuan Chen, Jong-Shian Liou, Yu-Chun Lin, Moriyuki Hamada, Yu-Ting Wang, Lin-Liang Peng, Shen-Chang Chang, Chih-Chieh Chen, Chuen-Fu Lin, Lina Huang, Chien-Hsun Huang
    Life.2022; 12(11): 1749.     CrossRef
  • Pseudonocardia humida sp. nov., an Actinomycete Isolated from Mangrove Soil Showing Distinct Distribution Pattern of Biosynthetic Gene Clusters
    Zhen-Yu Zan, Xian-Feng Ge, Rui-Rui Huang, Wen-Zheng Liu
    Current Microbiology.2022;[Epub]     CrossRef
  • Occultella gossypii sp. nov., an alkali-resistant isolate from soil sampled in a cotton field
    Xianfeng Ge, Ruirui Huang, Wenzheng Liu
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Rhodococcus oxybenzonivorans sp. nov., a benzophenone-3-degrading bacterium, isolated from stream sediment
    Ju Hye Baek, Woonhee Baek, Sang Eun Jeong, Sung Chul Lee, Hyun Mi Jin, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology.2022;[Epub]     CrossRef
  • Pedobacter aquae sp. nov., a multi-drug resistant bacterium isolated from fresh water
    Le Tran Tien Chau, Yong-Seok Kim, Chang-Jun Cha
    Antonie van Leeuwenhoek.2022; 115(3): 445.     CrossRef
  • Amsterdam urban canals contain novel niches for methane‐cycling microorganisms
    Koen A. J. Pelsma, Michiel H. in 't Zandt, Huub J. M. Op den Camp, Mike S. M. Jetten, Joshua F. Dean, Cornelia U. Welte
    Environmental Microbiology.2022; 24(1): 82.     CrossRef
  • Roseovarius carneus sp. nov., a novel bacterium isolated from a coastal phytoplankton bloom in Xiamen
    Xueqiong Sun, Dan Lin, Yu Han, Jia Sun, Jianing Ye, Beihan Chen, Kai Tang
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Tenacibaculum aquimarinum sp. nov., isolated from a marine alga and seawater
    Sylvia Kristyanto, Kyeong Ryeol Kim, Jaejoon Jung, Hyung Min Kim, Keunpil Kim, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Rheinheimera maricola sp. nov., isolated from seawater of the Yellow Sea
    Kyung Hyun Kim, Ju Hye Baek, Ruan Wenting, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov. sp. nov., Bombilactobacillus folatiphilus sp. nov. and Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid bacterial isolates from stingless bees Tetragonula ca
    Scott A. Oliphant, Nathan S. Watson-Haigh, Krista M. Sumby, Jennifer Gardner, Scott Groom, Vladimir Jiranek
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Description of Polaribacter batillariae sp. nov., Polaribacter cellanae sp. nov., and Polaribacter pectinis sp. nov., novel bacteria isolated from the gut of three types of South Korean shellfish
    Su-Won Jeong, Jeong Eun Han, June-Young Lee, Ji-Ho Yoo, Do-Yeon Kim, In Chul Jeong, Jee-Won Choi, Yun-Seok Jeong, Jae-Yun Lee, So-Yeon Lee, Euon Jung Tak, Hojun Sung, Hyun Sik Kim, Pil Soo Kim, Dong-Wook Hyun, Jin-Woo Bae
    Journal of Microbiology.2022; 60(6): 576.     CrossRef
  • Neokomagataea anthophila sp. nov., an osmotolerant acetic acid bacterium isolated in Thailand and emended description of the genus Neokomagataea
    Piyanat Charoenyingcharoen, Pattaraporn Yukphan, Sukunphat Malimas, Somsak Likhitrattanapisal, Somboon Tanasupawat, Yuzo Yamada
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Massilia soli sp. nov., isolated from soil
    Ju Hye Baek, Woonhee Baek, Wenting Ruan, Hye Su Jung, Sung Chul Lee, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Parasphingorhabdus cellanae sp. nov., isolated from the gut of a Korean limpet, Cellana toreuma
    Ji-Ho Yoo, Jeong Eun Han, June-Young Lee, Su-Won Jeong, Yun-Seok Jeong, Jae-Yun Lee, So-Yeon Lee, Hojun Sung, Euon Jung Tak, Hyun Sik Kim, Pil Soo Kim, Jee-Won Choi, Do-Yeon Kim, In Chul Jeong, Do-Hun Gim, Seo Min Kang, Jin-Woo Bae
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Actinotalea soli sp. nov., isolated from Kubuqi Desert soil
    Jie Du, Weiwei Ping, Ya Chen, Huancheng Pang, Pengze Bai, Siqi Cui, Jianli Zhang
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Arsenicicoccus cauae sp. nov., isolated from the blood of a pediatric gastroenteritis patient
    Oh Joo Kweon, Kyung Hyun Kim, Hyung Min Kim, Shehzad Abid Khan, Ji Hun Jeong, Yong Kwan Lim, Hye Ryoun Kim, Che Ok Jeon, Mi-Kyung Lee
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Ramlibacter terrae sp. nov. and Ramlibacter montanisoli sp. nov., Isolated from Soil
    Shehzad Abid Khan, Hyung Min Kim, Ju Hye Baek, Hye Su Jung, Che Ok Jeon
    Journal of Microbiology and Biotechnology.2021; 31(9): 1210.     CrossRef
  • Ramlibacter algicola sp. nov., isolated from a freshwater alga Cryptomonas obovoidea
    Hyung Min Kim, Dong Min Han, Byung Hee Chun, Hye Su Jung, Kyung Hyun Kim, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
Introducing EzAAI: a pipeline for high throughput calculations of prokaryotic average amino acid identity
Dongwook Kim , Sein Park , Jongsik Chun
J. Microbiol. 2021;59(5):476-480.   Published online April 28, 2021
DOI: https://doi.org/10.1007/s12275-021-1154-0
  • 1,514 View
  • 6 Download
  • 497 Web of Science
  • 488 Crossref
AbstractAbstract PDF
The average amino acid identity (AAI) is an index of pairwise genomic relatedness, and multiple studies have proposed its application in prokaryotic taxonomy and related disciplines. AAI demonstrates better resolution in elucidating taxonomic structure beyond the species rank when compared with average nucleotide identity (ANI), which is a standard criterion in species delineation. However, an efficient and easy-to-use computational tool for AAI calculation in large-scale taxonomic studies is not yet available. Here, we introduce a bioinformatic pipeline, named EzAAI, which allows for rapid and accurate AAI calculation in prokaryote sequences. The EzAAI tool is based on the MMSeqs2 program and computes AAI values almost identical to those generated by the standard BLAST algorithm with significant improvements in the speed of these evaluations. Our pipeline also provides a function for hierarchical clustering to create dendrograms, which is an essential part of any taxonomic study. EzAAI is available for download as a standalone JAVA program at http:// leb.snu.ac.kr/ezaai.

Citations

Citations to this article as recorded by  
  • Wenzhouxiangella psychrophila sp. nov., Wenzhouxiangella indolica sp. nov., and Halotectona sediminis gen. nov., sp.nov., three novel taxa with ability of IAA production from saline lake sediment
    Qing-Yu Xu, Tayyiba Habib, Lei Gao, Dildar Wu, Xin-Yao Li, Thi-Nhan Khieu, Yue-Heng Chen, Yao Zhang, Yong-Hong Liu, Ting-Ting She, Bao-Zhu Fang, Wen-Jun Li
    Systematic and Applied Microbiology.2026; 49(1): 126683.     CrossRef
  • Regulation of indigoidine production in Vogesella indigofera by a novel two-component system
    Madison Babcock, Kristin Romanelli, Samantha Gonzalez, Genevieve Robinson, Peter D. Newell, Michael Y. Galperin
    Journal of Bacteriology.2026;[Epub]     CrossRef
  • Description of Albimonas marina sp. nov., isolated from sea sand on the Yellow Sea Coast
    Hyunwoo Jung, Young Rok Kim, Eunseo Cho, Jung-Sook Lee, Jung-Hoon Yoon, Ampaitip Sukhoom, Wonyong Kim
    Current Microbiology.2026;[Epub]     CrossRef
  • Genome-wide regulon of NtrC reveals genetic regulation under nitrogen limitation in Methylomonas sp. DH-1
    Sukjae Han, Joon Young Park, Yong Hee Han, Ina Bang, Hyeonwoo Mun, Ok Kyung Lee, Ji Sung Hyung, Jeong-Geol Na, Eun Yeol Lee, Donghyuk Kim, Sang Woo Seo
    iScience.2026; 29(1): 114322.     CrossRef
  • Phenotypic and Phylogenomic Analyses of Saliniferula longa gen. nov., sp. nov.
    Jaewoo Yoon, Ji Hoon Oh
    Current Microbiology.2026;[Epub]     CrossRef
  • Proposal of two novel species, Allocoprococcus similis gen. nov., sp. nov. and Faecalimonas hominis sp. nov., isolated from human faeces and genome-based reorganization of the genus Coprococcus
    Eri Yamamoto, Atsushi Hisatomi, Kana Miwa, Naomi Sakurai, Akiko Koizumi, Moriya Ohkuma, Hanae Tsuchihashi, Mitsuo Sakamoto
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Antrihabitans auranticaus sp. nov., Isolated from a Cave, and Emended Description of the Genus Antrihabitans
    Soon Dong Lee, Hong Lim Yang, In Seop Kim
    Current Microbiology.2026;[Epub]     CrossRef
  • Identification and characterization of RacX, a new broad-specificity amino acid racemase from a novel taxon within the order Flavobacteriales
    Li Hu, Xin-Yun Tan, Yu-Qi Ye, Xin-Yu Liu, Yu-Zhu Li, Jing-Yao Wang, Ting-Ran Zhang, Zong-Jun Du, Meng-Qi Ye, Haruyuki Atomi
    Applied and Environmental Microbiology.2026;[Epub]     CrossRef
  • Ningiella algicola sp. nov. and Marinicella algicola sp. nov., proposal of Paralteromonas gen. Nov. and Neoalteromonas gen. Nov. with reclassification of Alteromonas species, and reclassification of Methylophaga aminisulfidivorans as a later heterotypic s
    Hülya Bayburt, Jeong Min Kim, Byeong Jun Choi, Jae Kyeong Lee, Che Ok Jeon
    Systematic and Applied Microbiology.2026; 49(1): 126685.     CrossRef
  • Genomic Insights into Marinovum sedimenti sp. nov., Isolated from Okhotsk Sea Bottom Sediments, Suggest Plasmid-Mediated Strain-Specific Motility
    Lyudmila Romanenko, Viacheslav Eremeev, Evgeniya Bystritskaya, Peter Velansky, Valeriya Kurilenko, Marina Isaeva
    Microorganisms.2026; 14(1): 125.     CrossRef
  • Draft genome of Acinetobacter baumannii strain niger01 co-producing bla NDM-1 and bla OXA-23 genes in Niger
    Abdourahamane Yacouba, Oumou Hamidou, Ahmed Olowo-Okere, Abdoulaye Ousmane, Massir Issoufou-Noma, Bassirou Abdou-Natali, Ounoussa Tapha, Mahamadou Doutchi, Saidou Mamadou, Daria Van Tyne
    Microbiology Resource Announcements.2026;[Epub]     CrossRef
  • Calyptranema fuscum gen. sp. nov.: a novel cyanobacterial genus within Oculatellaceae based on polyphasic and genomic characterization
    Renuka More, Vinay Yadav, Nithya Vadakedath
    Current Research in Microbial Sciences.2026; 10: 100542.     CrossRef
  • Litorerythrobacter xanthomarinus gen. nov., sp. nov., a novel marine bacterium with distinct phenotypic traits from tidal mudflat sediment
    Akila Kathiresan, Hyung-Seop Kim, Cong Li, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
    Antonie van Leeuwenhoek.2026;[Epub]     CrossRef
  • Brachymonas moutaii sp. nov., a floc-forming bacterium isolated from a distillery wastewater treatment plant
    Yaqi Liu, Hui Wang, Ansi Jiang, Junmei Wu, Bi Chen, Yong Zhang, Siliang Yuan, Yan Huang, Haiyan Zeng, Xin Wang, Dian Jiao, Wei Li, Yuhang Zhu, Dongru Qiu, Ping Xiang
    Antonie van Leeuwenhoek.2026;[Epub]     CrossRef
  • SSTDhunter: a curated gene database for investigating androgen producing potential in microbiota species
    Shaojing Wang, Yifan Yang, Li Lei, Rongxin Wan, Zhaoying Su, Yan Liu, Huiqin Tang, Guoying Hu, Changlin Li, Changying Li, Jinhuan Meng, Kuo Yang
    Frontiers in Cellular and Infection Microbiology.2026;[Epub]     CrossRef
  • Reclassification of the genus Dysgonomonas and description of Dysgonomonas reticulitermitis sp. nov. and Viscerimonas tarda gen. nov., sp. nov. from the gut of the subterranean termite Reticulitermes speratus
    Kazuki Takahashi, Atsushi Hisatomi, Kosuke Mori, Masahiro Yuki, Satoko Noda, Yuichi Hongoh, Moriya Ohkuma, Mitsuo Sakamoto
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Methanosarcina mangrovi sp. nov. and Methanosarcina sediminis sp. nov., two novel methanogenic archaea isolated from mangrove sediments
    Jinjie Zhou, Huidan Tan, Cui-Jing Zhang, Meng LI
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Description of Spongorhabdus gen. nov., a novel genus within the Endozoicomonadaceae family, and its type species Spongorhabdus nitratireducens sp. nov., isolated from marine sponges
    Vanessa Oliveira, Inês Ferreira, Daniel F.R. Cleary, Yusheng M. Huang, Rodrigo Costa, Tina Keller-Costa, Newton C.M. Gomes
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Microbacterium salitolerans sp. nov., isolated from saline soil
    Pengze Bai, Ya Chen, Fang Liu, Zhengwen Wang, Jingnan Guo, Qigang Wang, Yuhua Xin, Jianli Zhang
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Uncovering hidden phylo- and ecogenomic diversity of the widespread methanotrophic genus Methylobacter
    Magdalena Wutkowska, Justus A Nweze, Vojtěch Tláskal, Julius E Nweze, Anne Daebeler, Eileen Kröber
    FEMS Microbiology Ecology.2026;[Epub]     CrossRef
  • A novel Queuovirinae subfamily phage targeting Acinetobacter baumannii: Isolation, characterization, and synergistic lysis system
    Haoyu Li, Wenjun Zhao, Xiaoxiao Li, Xiaoyue Wang, Hanqi Wei, Wanlian Zhang, Xiangxiu Chen, Shihao Song
    Microbial Pathogenesis.2026; 213: 108380.     CrossRef
  • Chitinirhabdus sediminis gen. nov. sp. nov., a novel chitin-degrading bacterium of family Chitinibacteraceae isolated from the mangrove sediment
    Liyan Yang, Yong Xu, Ni Ren, Zhou Wang, Xiaodong Xu, Lixia Pan, Dengfeng Yang
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Legionella petroniana sp. nov., a novel species isolated in Bologna, Italy: taxonomic, genomic and ecological insights in the era of environmental change
    Sandra Cristino, Laura Caligaris, Silvano Salaris, Carlo Derelitto, Caterina Bonincontro, Federica Marino, Antonella Grottola, Luna Girolamini
    Systematic and Applied Microbiology.2026; 49(2): 126694.     CrossRef
  • Genomic insight into Anoxybacillus dikiliensis sp. nov., a hot spring isolate from Dikili exhibiting biotechnologically important features
    Arzu Coleri Cihan, Efe Dallı, Basar Karaca, Bora Ergin, Birgul Ozcan
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Characterization of Streptomyces tatrensis sp. nov., isolated from a cave located in Tatra mountains in Poland
    Patrycja Bielańska, Elaine Romines, Patrycja Golińska, Łukasz Rąbalski, Grzegorz Węgrzyn
    Archives of Microbiology.2026;[Epub]     CrossRef
  • Anaeroglomus insulsum gen. nov., sp. nov., anaerobic planctomycete, isolated from a thermal water stream
    M.A. Khomyakova, A.Y. Merkel, A.A. Novikov, K.D. Davranov, A.I. Slobodkin
    Systematic and Applied Microbiology.2026; 49(2): 126695.     CrossRef
  • Discovery and genomics of H2-oxidizing/O2-reducing Deferribacterota ectosymbiotic with protists in the guts of termites and a Cryptocercus cockroach
    Naoya Maruoka, Rinpei Kudo, Katsura Igai, Michiru Shimizu, Masahiro Yuki, Moriya Ohkuma, Yuichi Hongoh
    ISME Communications.2026;[Epub]     CrossRef
  • Genome-based Classification of Paenibacillus Litoralis sp. nov., Isolated from Coastal Soil in Dokdo, Republic of Korea
    Chi Young Hwang, Eun Hee Bae, In-Tae Cha, Myung-Ji Seo
    Current Microbiology.2026;[Epub]     CrossRef
  • Isolation and characterization of anaerobic thermophilic bacterium Caldisericum insulae sp.nov., the second cultivated representative of the phylum Caldisericota
    Nataliya M. Ratnikova, A. Y. Merkel, A. A. Novikov, A. I. Slobodkin
    Extremophiles.2026;[Epub]     CrossRef
  • Desulfurivibrio nitratireducens sp. nov. and Desulfurivibrio modestus sp. nov., two novel alkaliphilic anaerobes isolated from terrestrial mud volcanoes
    M.A. Khomyakova, A.Y. Merkel, D.S. Kopitsyn, A.I. Slobodkin
    Systematic and Applied Microbiology.2026; 49(2): 126693.     CrossRef
  • Pseudomonas macauensis sp. nov., Isolated from the Wastewater Treatment Plant in Macau peninsula
    Xinjie Yu, Yiran Yin, Zongxin Tao, Lan Qiu, Zhili He, Zhenmei Lu
    Current Microbiology.2026;[Epub]     CrossRef
  • Genome Analysis and Characterization of Formosa bonchosmolovskayae sp. nov. Isolated from Brown and Green Algae, and a Proposal to Reclassify Formosa maritima Cao et al. 2020 and Bizionia arctica Li et al. 2015 as Xanthomarina New Members
    Olga Nedashkovskaya, Evgeniya Bystritskaya, Yulia Savicheva, Yulia Bronnikova, Nadezhda Otstavnykh, Viacheslav Eremeev, Song-Gun Kim, Natalia Zhukova, Marina Isaeva
    Microorganisms.2026; 14(2): 328.     CrossRef
  • Genomic insights into the functional and metabolic versatility of gut microbiome Anaerostipes species
    Disha Bhattacharjee, Lindsey C. Millman, Meagan L. Seesengood, Lindsey M. Martineau, Anna M. Seekatz
    Microbial Genomics .2026;[Epub]     CrossRef
  • High-efficiency methane consumption by atmospheric methanotrophs in subsurface karst caves: The irrefutable methane sink
    Xiaoyan Liu, Xiaoyu Cheng, Yiming Zhang, Rui Zhao, Weiqi Wang, Yang Li, Zhong-Qiang Chen, Xincheng Qiu, Olli H. Tuovinen, Ian D. Bull, Richard P. Evershed, Hongmei Wang
    Science Advances.2026;[Epub]     CrossRef
  • Tychonema litorale sp. nov. (Microcoleaceae, Oscillatoriales): A New Species of Cyanobacteria Associated with Ecological Crisis in Lake Baikal Coastal Zone
    Ekaterina Sorokovikova, Irina Tikhonova, Peter Evseev, Igor Khanaev, Andrey Krasnopeev, Darya Gutnik, Galina Fedorova, Sergey Potapov, Anna Gladkikh, Ivan Nebesnykh, Oleg Timoshkin, Olga Belykh
    Diversity.2026; 18(2): 84.     CrossRef
  • Genomic and functional insights into a novel Lactococcus sp. AK05 from Cirrhinus mrigala with potent antagonism against Aeromonas hydrophila
    Anasuya Karjee, Soumya Chatterjee, Ranadhir Chakraborty
    World Journal of Microbiology and Biotechnology.2026;[Epub]     CrossRef
  • Fulvimarina fulva sp. nov. and Fulvimarina thalattae sp. nov., isolated from seawater off Ganghwa Island, South Korea
    Hyunji Lee, Inhyup Kim, Sunho Park, Haejin Woo, Subin Yook, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Genomic Insights into Bacterioruberin and Halorhodopsin Biosynthetic Genes in 12 Halophilic Archaea Isolated from Korean Solar Salterns
    Dongseok Lee, Chi Young Hwang, Eui-Sang Cho, Young-Hyun You, Myung-Ji Seo
    Journal of Microbiology and Biotechnology.2026;[Epub]     CrossRef
  • Occallatibacter bavaricus sp. nov., a new representative of the Acidobacteriota isolated from fen soils, reclassification of Terracidiphilus gabretensis as Occallatibacter gabretensis comb. nov. and emended description of the genus Occallatib
    Katharina J. Huber, János Papendorf, Carolin Pilke, Petra Büsing, Boyke Bunk, Cathrin Spröer, Sarah Kirstein, Jacqueline Wolf, Meina Neumann-Schaal, Manfred Rohde, Michael Pester
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Sequencing of the invasive E. coli strain BEN2908 isolated from poultry: A comparative investigation of genomic regions shared with intestinal and extraintestinal model E. coli strains
    Tobias Weber Martins, Angélina Trotereau, Simone Lahnig-Jacques, Maxime Branger, Sébastien Houle, Charles M. Dozois, Daniel Brisotto Pavanelo, Fabiana Horn, Catherine Schouler, Feng Gao
    PLOS One.2026; 21(2): e0342894.     CrossRef
  • Description and Comparative Genomic Analysis of Salipiger Bruguierae sp. nov., a Novel Member of the Family Roseobacteraceae Isolated from Mangrove Sediments
    Qiangcai He, Shaoshuai Tang, Zhen Gan, Dakun Chen, Huimin Fan, Yishan Lu, Meng Long
    Current Microbiology.2026;[Epub]     CrossRef
  • Deinococcus pantiae sp. nov., a UV-resistant bacterium isolated from a lake in Schirmacher Oasis, Antarctica
    Namrata Jiya, Wormirin Khudai, Bhavuk Gupta, Dev Kant Sindhu, Vibhaw Shrivastava, Sonia Thite, Prachi Karodi, Venkata Ramana Vemuluri, Avinash Sharma
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Potential survival strategies of novel comammox and nitrite-oxidizing Nitrospira synthesizing osmoprotectants in a wastewater microbiome treating high-ammonia brackish landfill leachate
    Shohei Yasuda, Alejandro Palomo, Barth F. Smets, Akihiko Terada
    Microbiome.2026;[Epub]     CrossRef
  • Streptomyces tyrfis sp. nov., an actinobacterium isolated from Thai peat swamp forest soil and its promising secondary metabolites
    Penkawee Kottip, Khanungkan Klanbut, Poowadon Fukasem, Pattama Pittayakhajonwut, Chakapong Intaraudom, Nantiya Bunbamrung, Chanwit Suriyachadkun, Montri Yasawong, Ya-Wen He, Somboon Tanasupawat, Sarin Tadtong, Chitti Thawai
    Scientific Reports.2026;[Epub]     CrossRef
  • Apolloniradiicaulis salifontis gen. nov., sp. nov., a New Prosthecate Aerobic Anoxygenic Phototroph Isolated from Lake Winnipegosis Region Salt Springs
    Katia Messner, Caleb Pereira, John A. Kyndt, Marike Palmer, Vladimir Yurkov
    Microorganisms.2026; 14(3): 525.     CrossRef
  • Halotolerantifilum yawarlongkerapense gen. nov., sp. nov., a novel halotolerant and thermotolerant bacterium isolated from Lake Warden, and proposal of Guggenheimellaceae fam. nov. in the order Peptostreptococcales
    Luke A. Fisher, Saloni R. Dangre, Jordan M. McKaig, Paul A. Lawson, Bryce G. Inman, Arthur Odenheimer, Taylor A. Plattner, Enrica Quartini, Christopher E. Carr, Peter T. Doran, Jeff S. Bowman, Britney E. Schmidt, Douglas H. Bartlett
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Halomonas terrestris sp. nov., a Novel Facultatively Anaerobic Bacterium, Isolated from a Terrestrial Mud Volcano
    M. A. Khomyakova, A. Y. Merkel, A. I. Slobodkin
    Microbiology.2026; 95(1): 17.     CrossRef
  • Evolutionary dynamics of type VI secretion systems in fruit fly-associated Enterobacter
    Naima Bel Mokhtar, Panagiota Stathopoulou, Elias Asimakis, Antonios Augustinos, Julieta Salgueiro, Malini Alleck, Preeaduth Sookar, Óscar Dembilio, Diego F. Segura, George Tsiamis
    Frontiers in Microbiology.2026;[Epub]     CrossRef
  • Complete genome sequence of Virgibacillus sp. KFRI-KCUT25010 isolated from a fermented hairtail ( Trichiurus lepturus ) sauce
    Myunglip Lee, Yukyoung Park, Sunghun Yi, Zhenjiang Zech Xu
    Microbiology Resource Announcements.2026;[Epub]     CrossRef
  • Arboribacterium acericorticis gen. nov., sp. nov., an under-represented oligotrophic bacterium of the phylum Abditibacteriota isolated from the bark of Acer palmatum
    Kazuki Kobayashi, Masato Takahashi, Nobutada Kimura, Hideki Aoyagi
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Genomic insights into adaptation and microevolution of two novel non-AOA Nitrososphaeria, Acidarchaeum fankouense and Thermosulfuris yongpingense, in acid mine drainage ecosystems
    Licao Chang, Xikai Su, Wenzhe Hu, Yun Fang, Jun Liu, Jintian Li, Linan Huang, Wensheng Shu
    Systematic and Applied Microbiology.2026; 49(3): 126711.     CrossRef
  • Draft genome of clinical isolate of bla OXA-395 and bla PAO -producing Pseudomonas aeruginosa strain NeRAM02 isolated from urine in Niger
    Abdourahamane Yacouba, Oumou Hamidou, Ahmed Olowo-Okere, Abdoulaye Ousmane, Massir Issoufou-Noma, Bassirou Abdou-Natali, Ounoussa Tapha, Mahamadou Doutchi, Saidou Mamadou, Catherine Putonti
    Microbiology Resource Announcements.2026;[Epub]     CrossRef
  • Acidaminococcus nyctereutis sp. nov., a bacterium isolated from the gut of a raccoon dog (Nyctereutes procyonoides)
    Shuo Li, Xue Zhang, Jia-Xin Zhao, Yun-Bo Miao, Hai-Hua Zhang, Yu-Mei Dai
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Genomics-based insights into the expanded diversity and adaptation strategies of hadal trench anammox bacteria
    Yao Xiao, Rui Zhao, Weishu Zhao, Pudi Wang, Xiang Xiao, Xiaotong Peng, Hongmei Jing
    ISME Communications.2026;[Epub]     CrossRef
  • Genome Mining and Functional Characterization of Agarases from a Novel Vibrio Species
    Marc Jeremie D. Punzalan, Neil Andrew D. Bascos, Arturo O. Lluisma
    Marine Biotechnology.2026;[Epub]     CrossRef
  • Description and genomic insights of Niallia laureatilytica sp. nov., isolated from coastal ecosystem
    Neetha Joseph, Datta Madamwar, Mansi Gangtire, Namrata Jiya, Vilas Patel, Amaraja Joshi, Prachi Karodi, Avinash Sharma
    Antonie van Leeuwenhoek.2026;[Epub]     CrossRef
  • An updated outlook at the planctomycetal genus Singulisphaera: New members, genomes, and functional roles
    Svetlana N. Dedysh, Anastasia A. Ivanova, Irina S. Kulichevskaya, Daniil G. Naumoff, Natalia E. Suzina, Alexey V. Beletsky, Andrey L. Rakitin, Andrey V. Mardanov, Nikolai V. Ravin
    Systematic and Applied Microbiology.2026; 49(3): 126713.     CrossRef
  • Genomic determinants of antifungal activity of Streptomyces melanosporofaciens STM-2 revealed by genome mining, comparative genomics and evolutionary analysis
    Muhammed Opoku Gyamfi, Ming-Jen Cheng, Jyh-Yih Leu, Min Tseng, Joshua Addo, Ai-Ling Hour, Wei-Chung Cheng
    Frontiers in Microbiology.2026;[Epub]     CrossRef
  • Herbiconiux dendrobii sp. nov., a Novel Bacterium Isolated from Dendrobium devonianum Sawdust Substrate
    Hao Liang, Fang Zhao, Hong-Bo Zha, Zhang-Gui Ding, Le-Le Li, Jiang-Yuan Zhao, Zhi-Ran Zhao, Min Zheng, Jian-Sheng Cheng, Hui-Cheng Deng, Shu-Kun Tang, Ming-Gang Li
    Current Microbiology.2026;[Epub]     CrossRef
  • Genomic Insights into the Polysaccharide-Degrading Potential of Rhizosphere-Associated Niallia sp. M35 Isolated from Saline Soils in the Aydarkul Lake Region
    A. A. Umruzokov, K. V. Kondrasheva, K. D. Davranov, S. N. Gavrilov, A. G. Elcheninov, V. La Cono, L. Marturano, G. La Spada, M. M. Yakimov, E. Messina
    Microbiology.2026; 95(2): 232.     CrossRef
  • A human-associated Spiroplasma ixodetis lineage responsible for infantile cataracts and adult febrile illness
    Marie Buysse, Matthew J. Ballinger, Marjorie Bruley, Julien Amoros, Justine Grillet, Navid Farassat, Annerose Serr, Wolf Alexander Lagrèze, Christine Wennerås, Anna Grankvist, Thomas Schön, Jonas Berglund, Lesley Bell-Sakyi, Hein Sprong, Olivier Duron
    iScience.2026; 29(4): 115233.     CrossRef
  • Pampinifervens navoyensis sp. nov., an Extremely Thermophilic Facultatively Anaerobic Chemolithoautotrophic Bacterium from a Hot Spring at the Navoi Region (Uzbekistan)
    T. G. Sokolova, A. Y. Merkel, A. A. Novikov, K. D. Davranov, N. A. Chernyh
    Microbiology.2026; 95(2): 208.     CrossRef
  • Pedobacter terrestris sp. nov. and Pedobacter paludisoli sp. nov., Isolated from Wetland Soil
    Jae Kyeong Lee, Byeong Jun Choi, Hülya Bayburt, Jeong Min Kim, Che Ok Jeon
    Current Microbiology.2026;[Epub]     CrossRef
  • A genomic atlas of gut clostridia: phylogeny, butyrate, and propionate production
    Laura Sola, Francesco Candeliere, Enrico Busi, Stefano Raimondi, Alberto Amaretti, Maddalena Rossi
    Frontiers in Microbiology.2026;[Epub]     CrossRef
  • Genome-based reclassification of Chromohalobacter japonicus Sánchez-Porro et al. 2007 as a later heterotypic synonym of Chromohalobacter beijerinckii Peçonek et al. 2006
    Preeti Yadav, Pooja, Abhilash Kumar, Princy Hira, Gauri Garg, Charu Dogra Rawat, Rup Lal, Utkarsh Sood
    Antonie van Leeuwenhoek.2026;[Epub]     CrossRef
  • Microbacterium songi sp. nov., Microbacterium hanjuni sp. nov. and Microbacterium shimangi sp. nov., three novel salt-tolerant bacteria isolated from plateau voles (Neodon fuscus)
    Danna Pu, Jiali Chen, Ji Pu, Lin Ye, Hao Zhou, Xuelian Luo, Qian Ling, Teng Qi, Jianfeng Ba, Jing Yang, Jianguo Xu
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Pan-genome guided identification and functional characterisation of three putative bacteriocin variants from Brevibacillus laterosporus
    Ming Wu, Fushuang Duan, Shuang Chen, Yuhang Nie, Zhanpeng Wang, Ying Yang, Xuepeng Cai, Jie Li, Zhongmei Ma, Qingling Meng, Jun Qiao
    World Journal of Microbiology and Biotechnology.2026;[Epub]     CrossRef
  • Novel Methanosarcinaceae species Methanohalophilus methylutens sp. nov., Methanolobus methylotrophicus sp. nov., and Methanococcoides guerreronegronense sp. nov. from Guerrero Negro hypersaline microbial mats in accordance with the SeqCode
    Patricia J. Ramírez-Arenas, Alejandro López-Cortés, Miguel A. Martínez-Mercado
    Systematic and Applied Microbiology.2026; 49(3): 126716.     CrossRef
  • Hot life in Antarctica: a novel metabolically versatile Pyrodictiaceae genus thriving at a volcanic–cryosphere–marine interface
    Ana Carolina de Araújo Butarelli, Francielli Vilela Peres, Vivian Helena Pellizari, Amanda Gonçalves Bendia
    ISME Communications.2026;[Epub]     CrossRef
  • Paramicrobacterium salitolerans sp. nov. isolated from the agricultural soil and Microbacterium fluminis sp. nov. isolated from the Han River, South Korea
    Gracia Pradnya Lolita, Do-Hoon Lee, Yong-Seok Kim, Chang-Jun Cha
    Journal of Microbiology.2026; 64(4): e2512014.     CrossRef
  • A comprehensive genome-centred taxonomy for agrobacteria and rhizobia in the Bartonellaceae and Rhizobiaceae families
    Melandré van Lill, Stephanus N. Venter, Marike Palmer, Chrizelle W. Beukes, Emma T. Steenkamp
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Genome-resolved metagenomics reveals a phylogenetically cohesive Acetilactobacillus-like species complex dominating stingless bee pot honey
    Aurora Xolalpa-Aroche, Haydeé Contreras-Peruyero, Enrique J Delgado-Suárez, David I Hernández-Mena, Wilson I Moguel-Chin, Jose F Rivero-Cruz, Rodrigo A Velarde, Elizabeth Ortiz-Vázquez, Blanca E Rivero-Cruz, Jose Abel Lovaco-Flores, Lorena Rodríguez Orduñ
    ISME Communications.2026;[Epub]     CrossRef
  • Cupriavidus smyrnaeus sp. nov., Isolated from Soil Litter Near an Arum sp.
    Nurettin Sahin, Akio Tani
    Current Microbiology.2026;[Epub]     CrossRef
  • Three novel bacterial species isolated from plasma-treated soil: Hymenobacter plasmatis sp. nov., Flavitalea plasmicola sp. nov. and Mucilaginibacter tolerans sp. nov.
    Seona Park, M. K. Kim, S. Srinivasan
    Antonie van Leeuwenhoek.2026;[Epub]     CrossRef
  • A Novel Freshwater Anammox Species of Candidatus Loosdrechtia Thriving Under Dual Salinity and Sulfate Stresses
    Wei Li, Zhiyao Wang, Han Fu, Yan-Rong Ma, Yong Gu, Jin-Long Zhuang, Yu-Xiang Zhao, Yong-Di Liu, Qiang Yang, James P. Shapleigh, Ren-Cun Jin, Jianhua Guo, Boran Kartal, Bruce E. Rittmann
    Environmental Science & Technology.2026; 60(23): 16629.     CrossRef
  • Microbial community synergy drives metal-dependent anaerobic methane oxidation under simulated deep-sea high-pressure conditions
    Cun Li, Jing-Chun Feng, Xuanyu Tao, Yingli Zhou, Xiao Chen, Song Zhong, Jianzhen Liang, Si Zhang
    ENGINEERING Environment.2026;[Epub]     CrossRef
  • Proposal of Edaphobacterium genomatis gen. nov., sp. nov. within the family Casimicrobiaceae from metagenome-assembled genomes in accordance with the SeqCode
    Luyao Xia, Luotian Lu, Manchun Liu, Jianyu Jiao, Lan Liu, Liqiang Meng, Yalong Liu, Wenjun Li, Caiyu Lu, Bin Ma
    Systematic and Applied Microbiology.2026; 49(4): 126735.     CrossRef
  • Phylogenomic Characterization of Hydrogenophaga sedimenti sp. nov. and Larkinella fluvii sp. nov. Isolated from Riverbed Soil
    Sunho Park, Hyunji Lee, Subin Yook, Chunghwan Baek, Jisu Kim, Seunghui Kwak, Taegun Seo
    Current Microbiology.2026;[Epub]     CrossRef
  • Complete genome sequences of metal-oxidizing bacteria Leptothrix mechoopdaensis BB-3 and BB-4
    Emily J. Fleming, Abigail McIntyre, Gracee K. Tothero, Joyce A. Zimmer, Jessica L. Keffer, Lydia N. Pierce, Kathleen R. Beilsmith, Rosemarie Wilton, Clara S. Chan, Karthik Anantharaman
    Microbiology Resource Announcements.2026;[Epub]     CrossRef
  • Gelidimonas denitrificans gen. nov., sp. nov., and Gelidimonas diazotrophica sp. nov. psychrophilic bacteria involved in the nitrogen cycle in tundra soils of South Spitsbergen
    Jakub Grzesiak, Julia Brzykcy, Peter Young, Elvira Krakowska, Robert Stasiuk, Kamil Krakowski, Przemysław Decewicz, Alina Kiedryńska, Renata Matlakowska, Dariusz Bartosik
    Systematic and Applied Microbiology.2026; 49(4): 126730.     CrossRef
  • Using the SeqCode to validate the names of reclassified lineages of rhizobia and agrobacteria
    Melandré van Lill, Emma T. Steenkamp, Marike Palmer, Chrizelle W. Beukes, Stephanus N. Venter
    Systematic and Applied Microbiology.2026; 49(4): 126720.     CrossRef
  • Detection and genetic characterization of Tembusu virus and other flaviviruses from mosquitoes in Lao PDR
    Chittaphone Vanhnollat, Somsanith Chonephetsarath, Somphavanh Somlor, Veaky Vungkyly, Tiger Soulaphy, Sopha Vongsanga, Irina V. Etobayeva, Thomas Bigot, Gary Wong, Andrew G. Letizia, Paul T. Brey, Philippe Buchy, Khamsing Vongphayloth, Pierre Roques
    PLOS One.2026; 21(6): e0351023.     CrossRef
  • Phylogenomic and phenotypic investigations of Terrisphaera buseokensis gen. nov., sp. nov., a verrucomicrobium isolated from riverside soil
    Jaewoo Yoon, Seong-Ryong Lee, Sanghwa Park
    Antonie van Leeuwenhoek.2026;[Epub]     CrossRef
  • Aliikangiella litoralis sp. nov. and Aliikangiella aequoris sp. nov., isolated from coastal seawaters of the Yellow Sea
    Seungyeop Oh, Yeonjung Lim, Meora Rajeev, Jang-Cheon Cho
    Journal of Microbiology.2026; 64(5): e2602008.     CrossRef
  • Phylogenomic and metabolic insights into iron reduction metabolism in the genus Deferribacter belonging to the order Deferribacterales
    Eva Pouder, Karine Alain, Sophie Mieszkin
    Microbial Genomics .2026;[Epub]     CrossRef
  • Taxonomic description of a novel genus, Parajatrophihabitans gen. nov., in the family Jatrophihabitantaceae
    Imen Nouioui, Sarah Kirstein, Gabriele Pötter, Marlen Jando, Juan Pablo Gomez Escribano, Meina Neumann-Schaal, Mathias Müsken, Cathrin Spröer, Boyke Bunk, Yvonne Mast
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Whole genome-based reclassification of the genus Metabacillus: Proposal for five novel genera, Chryseobacillus gen. nov., Cohnibacillus gen. nov., Salimetabacillus gen. nov., Pantoeobacillus gen. nov., and Lutimetabacillus gen. nov. and the description of
    Daniel Candia-Herrera, Matías Guerra, Jorge Carrasco-Fernández, Carolina Campos-Quiroz, Marina Garcia-Gomez, José M. Igual, Lorena Carro, Jean Franco Castro
    Systematic and Applied Microbiology.2026; 49(4): 126734.     CrossRef
  • A giant virus in a small lake: characterization of a new tropical algal virus expands the geographical and genetic diversity of the Brazilian virosphere
    Clécio Alonso da Costa Filho, Isadora Luiza de Jesus Canto, Bruna Barbosa Fagundes Botelho, Lethícia Ribeiro Henriques, João Victor Rodrigues Pessoa Carvalho, Ellen Gonçalves de Oliveira, Sara Arêdes da Cunha Souza, Júlia Winkler Souza, Mauricio Teixeira
    Journal of Virology.2026;[Epub]     CrossRef
  • Emended description of the genus Rhizobacter and reclassification of Ideonella sakaiensis as Pseudideonella sakaiensis gen. nov., comb. nov.
    Huibin Lu, Li Chen
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Three Mycobacterium avium genotypes classified by 1.4-Mb genomic inversion and single-nucleotide variations are tightly linked to disease progression
    Kentaro Tanaka, Yuuki Bamba, Nobumasa Aoki, Ikumi Yamagishi, Kenjiro Shima, Hideyuki Ogata, Satoshi Shibata, Yasuyoshi Ohshima, Satoshi Watanabe, Hiroshi Moro, Toshiyuki Koya, Mitsuhiro Yamada, Hisatoshi Sugiura, Akira Watanabe, Toshiaki Kikuchi
    International Journal of Infectious Diseases.2026; 169: 108816.     CrossRef
  • TaxaScope: a container-native, visualization-centric workstation for genome-based bacterial taxonomy
    Yuxin Peng, Yue Jiang, Yong Jae Lee, Ju Huck Lee, Cha Young Kim, Jiyoung Lee
    Frontiers in Microbiology.2026;[Epub]     CrossRef
  • Metagenome-Assembled Genomes Support the Proposal of Candidatus Flavobacterium genomatis from the Northeast Black Soil Ecosystem
    Xiaoyue Zhang, Caiyu Lu, Luotian Lu, Liqiang Meng, Yalong Liu, Bin Ma
    Microorganisms.2026; 14(6): 1292.     CrossRef
  • Enhanced suppression of Pseudomonas coronafaciens pv. garcae, the etiological agent of coffee plant bacterial halo blight, by a four-phage cocktail in in-vitro and ex-planta studies: biological and kinetic profiling
    Fernanda C. Moreli, Lucas M.R. Rodrigues, Suzete A.L. Destefano, Marta M.D.C. Vila, Carla Pereira, Paul Hyman, Victor M. Balcão
    Bacteriophage.2026; 1: 100005.     CrossRef
  • Think pink 2.0 - Description of Roseobacter cerffii sp. nov., isolated from the chromerid alga Vitrella brassicaformis, and reclassification of Sulfitobacter sabulilitoris as Billmartinia sabulilitoris, gen. nov., comb. nov.
    Jörn Petersen, Victoria Ringel, Orsola Päuker, Anja Frühling, Manfred Rohde, Michael Jarek, Cathrin Spröer, Boyke Bunk, Katharina Huber-Fischer, Silke Pradella, Heike M. Freese, Julia Koblitz, Meina Neumann-Schaal, Henner Brinkmann
    Systematic and Applied Microbiology.2026; 49(4): 126731.     CrossRef
  • Parasediminibacterium schistidii sp. nov., a novel member of the family Chitinophagaceae isolated from a glacier moss ball in the Canadian High Arctic
    Shu-Kuan Wong, Yu Nakajima, Hiroshi Kanda, Vincent Maire, Masaki Uchida
    Antonie van Leeuwenhoek.2026;[Epub]     CrossRef
  • Isolation and Characterization of Pseudooceanicola aestuariicola sp. nov., from Tidal-Flat Sediments
    Ayesha Rehman, Shahzadi Raheela Anum, Naureen Khalid, Keun-Hyeok Yang, Suk Chan Lee, Sathiyaraj Srivansan, Sang Seob Lee
    Current Microbiology.2026;[Epub]     CrossRef
  • Methanococcoides mangrovi sp. nov. and Methanococcus mangrovi sp. nov., two novel methanogens isolated from mangrove sediments
    Jinjie Zhou, Huidan Tan, Cui-Jing Zhang, Meng Li
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Four novel Pseudoalteromonas species isolated from seawater: Pseudoalteromonas mucoides sp. nov., Pseudoalteromonas aquimarina sp. nov., Pseudoalteromonas maris sp. nov. and Pseudoalteromonas thalassia sp. nov.
    Inhyup Kim, Sunho Park, Chunghwan Baek, Seunghui Kwak, Haejin Woo, Hyunji Lee, Subin Yook, Jisu Kim, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Phylogenomic and genome-relatedness analyses resolve genus and family boundaries within the family Verrucomicrobiaceae
    Hana Dali, Imed Sbissi, Rihab Hamra, Tesnim Bouzidi, Haifa ElMay, Faten Ghodhbane-Gtari, Maher Gtari
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Mycobacterium toneyamaense sp. nov., a novel rapidly growing mycobacterium isolated from human patients
    Takeshi Komine, Makoto Nakaya, Nagatoshi Fujiwara, Kiyoharu Fukushima, Yuki Matsumoto, Hiroshi Kida, Manabu Ato, Satoshi Mitarai, Hanako Fukano
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Leucogemmata humicola gen. nov., sp. nov., an oligotrophic bacterium of the under-represented phylum Gemmatimonadota isolated from soil
    Rikuta Suzuki, Yumi Shimomura, Tomoki Iwashita, Xiang-Ying Meng, Kazuki Mori, Akiko Enomoto, Setsu Kato, Yutaka Nakashimada, Kosuke Tashiro, Hideyuki Tamaki, Yoshiteru Aoi
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Neffella xylocopae gen. nov., sp. nov., a novel host-specific gut symbiont of Xylocopa carpenter bees in the family Orbaceae
    Alan Emanuel Silva Cerqueira, Jo-anne C. Holley, Sarah C. Hatcher, Pedro Marcus Pereira Vidigal, Laila E. Phillips, Nancy A. Moran
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Culture-enriched sequencing reveals river confluence sediments as high-risk reservoirs of viable multidrug-resistant pathogens
    Yi Li, Huijuan Huang, Bi Luo, Rong Wang, Zhiwei Zhu
    Journal of Hazardous Materials.2026; 514: 142756.     CrossRef
  • Isolation and characterization of Pseudarthrobacter cremeus sp. nov. and Ideonella flava sp. nov. from mountain soil
    Chunghwan Baek, Sunho Park, Hyunji Lee, Subin Yook, Seunghui Kwak, Jisu Kim, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Distinguishing Leptothrix and Sphaerotilus genera by an integrated genomic-phenotypic analysis supported by new Leptothrix genomes
    Gracee K. Tothero, Jessica L. Keffer, David Emerson, Emily J. Fleming, Clara S. Chan, Ryan J. Newton
    mSystems.2026;[Epub]     CrossRef
  • A Modern Framework for Identifying Novel Environmental Legionella Species
    Karla Vasari, Maja Kovačević, Niko Kasalo, Snježana Kazazić, Ivan Mijakovic, Göran Klobučar, Damjan Franjevic, Josip Skejo, Tomislav Domazet-Lošo, Brian G. Shelton, Marina Santic, Roberta Sauerborn Klobucar
    Life.2026; 16(7): 1187.     CrossRef
  • Promicromonospora noduliphila sp. nov., a nodulation-enhancing actinobacterium isolated from the root nodules of grey-hair acacia planted in the Khurais desert, Saudi Arabia
    Khulud Alghannam, Grégoire Michoud, Alan Barozzi, Sarah Al Romaih, Rawan Alhazmi, Bob Vernooij, Kennedy Odokonyero, Adair Gallo, Himanshu Mishra, Daniele Daffonchio, Ramona Marasco
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Shotgun metagenomics uncovers novel features of the cyanobacterial community in a large, shallow lake in Central Italy
    Nico Salmaso, Leonardo Cerasino, Margherita Di Brizio, Massimo Pindo, Adriano Boscaini
    Hydrobiologia.2026;[Epub]     CrossRef
  • Resolving the evolutionary duality of marine symbionts: redefining the genus Endozoicomonas and proposing Neoendozoicomonas gen. nov
    Flúvio Modolon, Alessandro N Garritano, Philip Hugenholtz, Christian R Voolstra, Tina Keller-Costa, Rodrigo Costa, Torsten Thomas, Raquel S Peixoto
    ISME Communications.2026;[Epub]     CrossRef
  • Phylogenomic analysis of Paenibacillus larvae isolates from Slovakia predicts regional genomic clustering
    Anna Kopcakova, Jana Kiskova, Silvia Ivorova, M. Pilar Garcillán-Barcia, Peter Pristas
    Frontiers in Veterinary Science.2026;[Epub]     CrossRef
  • Comparative Genomic Insights into Genomic GC Variation in the Genus Kordiimonas
    Ruo-Ying Zhuo, Jia-Xi Li, Yue-Ran Zhu, Yu-Chen Deng, Xiang-Yang Yu, Cong Sun, Lin Xu
    Diversity.2026; 18(7): 421.     CrossRef
  • Marinomonas algae sp. nov. and Marinomonas phycocola sp. nov., two novel bacteria isolated from marine algae
    Yea-Lin Moon, Kyoungdong You, Kyung Hyun Kim, Jin-Sook Park
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Characterization of Marinibium conchae gen. nov. sp. nov., a novel psychrotolerant mesophilic bacterium from mussels
    Young-Mi Lee, Jaincy N. Jayan, Ha-Jung Moon, Suk-Chan Lee, Sathiyaraj Srinivasan, Sang-Seob Lee
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Electricity generation and shifts in methanogenesis mediated by an oil-field-derived electroactive bacterium in legacy tar pit sediments
    Miho Watanabe, Chihiro Takayama, Nanaho Yoshida, Kosuke Watanabe, Kei Takahashi, Fumiaki Takakai, Kunihiro Okano, Nobuo Kaku, Naoyuki Miyata
    Cleaner Energy Systems.2026; 14: 100261.     CrossRef
  • Janthinobacterium foliorum sp. nov., isolated from the decayed leaves of wild alpine rhododendron
    Hui-Bin Lu, Ling-Yang Kong, Li Chen, Guang-Jie Chen
    Systematic and Applied Microbiology.2026; 49(4): 126736.     CrossRef
  • Caldifarcimen microaerophilum gen. nov., sp. nov., a facultatively anaerobic, thermophilic bacterium of a novel bacterial phylum, Caldifarciminota phyl. nov., formerly called candidate phylum WOR-3, description of Caldifarciminaceae fam. nov., Caldifarcim
    Koji Mori, Kohei Hidaka, Satoshi Tamazawa, Akira Hosoyama, Hideyuki Tamaki, Takeshi Kakegawa, Satoshi Hanada
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • The van Niel international prize for studies in bacterial systematics, awarded in 2026 to Jon Jongsik Chun
    Iain C. Sutcliffe, Edward R. B. Moore, Aharon Oren
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Eximiradius proteiniborus gen. nov., sp. nov., the first cultivated representative of the “Candidatus Kapaibacteriia” (lineage OPB56) and a proposal of Eximiradiaceae fam. nov., Eximiradiales ord. nov., Eximiradiia class. nov. within the phylum Bacteroido
    Olga A. Podosokorskaya, Alexander G. Elcheninov, Alexandra A. Klyukina, Evgenii N. Frolov, Alexander Y. Merkel
    Systematic and Applied Microbiology.2026; 49(5): 126753.     CrossRef
  • Genome-based analysis of the taxonomic structure of the genus Stenotrophomonas
    Valeriya V. Shapovalova, Elvira R. Shajdullina, G.A. Shipulin, Mikhail V. Edelstein
    Clinical Microbiology and Antimicrobial Chemotherapy.2026; 28(1): 4.     CrossRef
  • Comparative genomic analyses provide new insights into phylogenetic and functional diversification in genus Fenollaria
    Shaojing Wang, Lijuan Kang, Mei Li, Xiaodong Zhou, Bowen Li, Fei Wang, Jinhuan Meng, Changying Li, Kuo Yang
    Frontiers in Microbiology.2026;[Epub]     CrossRef
  • Sphingomonas incarnata sp. nov., an endophytic bacterium with bioactive potential isolated from passionfruit leaves
    Luis Gabriel Cueva-Yesquén, Kariny Marley de Castro Martins, Kelly Johanna Hidalgo-Martinez, Adilson Sartoratto, Adriana da Silva Santos de Oliveira, Itamar Soares de Melo, Fabiana Fantinatti-Garboggini
    BMC Microbiology.2026;[Epub]     CrossRef
  • Non-nodulating Paenirhizobium fix nitrogen in association with cereal roots
    Matthew J Campbell, Beatriz Jorrin, Zohar Katz, Andrzej Tkacz, Raphael Ledermann, Philip S Poole
    ISME Communications.2026;[Epub]     CrossRef
  • Genomic and polyphasic characterization of six novel Hymenobacter species isolated from soil in Korea
    Yuna Park, Seona Park, Soohyun Maeng, Myung Kyum Kim
    Antonie van Leeuwenhoek.2026;[Epub]     CrossRef
  • Description of Sulfitobacter gelatinilyticus sp. nov. and Sulfitobacter weihaiensis sp. nov., isolated from marine sediment
    Jing Zhang, Zou-Yu Jin, Hai-Qing Zhang, Zi-Hao Wan, Yuan-Xi Xiao, Hui-Xing Li, Zong-Jun Du
    Antonie van Leeuwenhoek.2026;[Epub]     CrossRef
  • Genomic and phenotypic insights into Pseudocolwellia antarctica sp. nov., a novel psychrotolerant bacterium with symbiotic potential from Antarctic zooplankton
    Min Kyo Kim, Seung Ju Oh, Bo Min Lee, Jun Lee, Chung Yeon Hwang
    Scientific Reports.2026;[Epub]     CrossRef
  • Rhodococcus dendrobeaniae sp. nov., an actinomycete isolated from an Arctic marine invertebrate exhibiting cytotoxic activity, and an emended description of Rhodococcus sovatensis
    Kim van Wezel, Elaine M. Romines, Kine Ø. Hansen, Jeanette H. Andersen, Espen H. Hansen, Patrycja Golińska, Yannik K.H. Schneider
    Systematic and Applied Microbiology.2026; 49(5): 126755.     CrossRef
  • Deciphering the genomic features of four newly isolated polyvalent bacteriophages infecting Pseudomonas coronafaciens pv. garcae: A tale of small beginnings
    Fernanda C. Moreli, Carlos A. Quinde, Basilio Cieza, Aakash Basu, Marta M.D.C. Vila, Carla Pereira, Paul Hyman, Victor M. Balcão
    Bacteriophage.2026; 1: 100010.     CrossRef
  • Routine methods misidentify Serratia spp.: Limitations of MALDI-TOF MS revealed by whole-genome sequencing
    Ingrid Macedo Felício, Edgard Freitas Vianna, Mila Muraro Almeida, Jéssica Oliveira Abreu, Robson Souza Leão, Elizabeth Andrade Marques
    Diagnostic Microbiology and Infectious Disease.2026; 116(4): 117624.     CrossRef
  • Melioribacter sulfuriphilus sp. nov., facultatively anaerobic thermophilic sulfur- and thiosulfate-respiring bacterium from Karmadon hot springs of North Ossetia (Russian Federation)
    Olga A. Podosokorskaya, Alexander Y. Merkel, Andrei A. Novikov, Alexandra A. Klyukina, Alexander G. Elcheninov
    Systematic and Applied Microbiology.2026; 49(6): 126768.     CrossRef
  • Description of Kinneretia algicola sp. nov. isolated from a freshwater green alga, and reclassification of 9 species within the family Sphaerotilaceae
    Byeong Jun Choi, Hülya Bayburt, Hui Seong Won, Dae Gyu Choi, Ji Young Jung, Che Ok Jeon
    Systematic and Applied Microbiology.2026; 49(6): 126771.     CrossRef
  • Phylogenetic diversity, ecological function, and evolutionary history of three novel phyla: Yinglongibacterota, Xuanmingibacterota, and Gonggongibacterota
    Jing‐Yi Zhang, Man‐Chun Liu, Zheng‐Han Lian, Meng‐Meng Li, Lei Gao, Yu‐Ting Ouyang, Maite Ortúzar, Lan Liu, Nimaichand Salam, Jian‐Yu Jiao, Wen‐Jun Li
    Journal of Systematics and Evolution.2026;[Epub]     CrossRef
  • Novel Thermophilic Species of Limisphaera Demonstrate Facultatively Anaerobic Mode of Life and Utilize a Wide Range of Carbohydrates
    Olga A. Podosokorskaya, Tatyana G. Sokolova, Kseniya S. Zayulina, Alexandra A. Klyukina, Polina R. Klepikova, Andrei A. Novikov, Alexander Y. Merkel, Alexander G. Elcheninov
    Life.2026; 16(9): 1543.     CrossRef
  • Enrichment and characterization of a haloalkaline-tolerant anammox bacterium
    Han-Yin Chuang, Jer-Horng Wu, Shan-Hua Chen, Wei-Yu Chen, Li-Jin Fong, Yi-Ting Lin
    The ISME Journal.2026;[Epub]     CrossRef
  • Pseudaquabacterium prasiolae sp. nov., Isolated from the Freshwater Green Alga Prasiola japonica, and Rubrivivax soli sp. nov., Isolated from Soil, with Reclassification of Aquabacterium humicola as Pseudaquabacterium humicola comb. nov.
    Jae Kyeong Lee, Seo Hui Choi, Seon Hoo Jung, Yeong Eun Kwon, Jeong Min Kim, Che Ok Jeon
    Current Microbiology.2026;[Epub]     CrossRef
  • Megamimivirus double-stranded DNA linear genomes flanked by highly diverse terminal inverted repeats
    Yucheng Xia, Lanlan Cai, Boyu Ding, Baiyu Su, Rui Zhang, Kristin N. Parent
    Journal of Virology.2026;[Epub]     CrossRef
  • Taxonomic characterization and secondary metabolic profiling of three novel species of the genus Kinneretia isolated from crater Lake water
    Zi-Xuan Liu, You-Jun Liao, Ya-Jing Yu, Ai-Hua Li
    Systematic and Applied Microbiology.2026; 49(6): 126770.     CrossRef
  • Acinetobacter legionensis sp. nov. and Acinetobacter psychrotolerans sp. nov. isolated from different types of retail meat
    Alba Puente, Cristina Galisteo, José F. Cobo-Díaz, Filipa Grosso, Coral Barcenilla, Mercedes López, Miguel Prieto, Luisa Peixe, Avelino Alvarez-Ordóñez
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Expanding the diversity of Desulfovibrio from the human gut: Desulfovibrio intestinivivus sp. nov., Desulfovibrio desulfopostgatei sp. nov. and Desulfovibrio faecalis sp. nov
    Marnie Barham, Melinda J. Mayer, Kathryn Gotts, Arjan Narbad, Lizbeth Sayavedra
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • A rice rhizosphere-derived methanotrophic consortium enhances root growth and reduces methane intensity in flooded soil
    Rey Anthony Sanjorjo, Tenzin Tseten, Jong-Wook Son, Snowie Jane G. Ampode, Lorraine Joule B. Estrada, So Yeong Park, Soon-Kyeong Kwon, Pil-Joo Kim, Sang-Hwal Yoon, Moonhyuk Kwon, Min-Kyoung Kang, Seon-Won Kim
    Applied Soil Ecology.2026; 227: 107485.     CrossRef
  • Description of Demequina pilifera sp. nov. and Demequina ureilytica sp. nov. isolated from a mixture of oil production fluids in Shengli Oilfield
    Yuwei Liu, Danni Wu, Ya-Jing Yu, Xin Song, Qiongyao Chen, Man Cai, Hong Ming
    International Journal of Systematic and Evolutionary Microbiology .2026;[Epub]     CrossRef
  • Biodegradation of petroleum hydrocarbon by Gordonia oleivorans sp. nov. isolated from oil-contaminated soil
    Thi Tuyet Nhan Le, Jin Jun, Hosun Aum, Jihoon Jung, Jaisoo Kim
    Scientific Reports.2026;[Epub]     CrossRef
  • Phylogenomic analysis and characterization of a novel metagenome-assembled genome from the Bay of Bengal and description of Candidatus Niobacter visakhapatnamensis gen. nov., sp. nov
    Naga Radha Srinivas Tanuku, Anil Kumar Pinnaka, Pradeep Kumar Patel, Hardik Chavda, Naveen Sagar Garbhapu, Satyanarayana Reddy Tadi, Ann Rose
    Archives of Microbiology.2026;[Epub]     CrossRef
  • Pan-proteome regulation of marine Synechococcus nutrient stress plasticity
    Nathan S. Garcia, Mak A. Saito, Renne Harcourt, Matthew R. McIlvin, Adam C. Martiny, Jizhong Zhou
    mBio.2026;[Epub]     CrossRef
  • Beyond the boundaries of microbial diversity in radioactive environments: novel microbial species isolated from a former silver-uranium mine’s radon-saturated waters
    Gabriela Kapinusova, Kunal Jani, Petr Pajer, Alena Filipova, Pavel Ulbrich, Tomas Cajthaml, Michal Strejcek, Jachym Suman, Ondrej Uhlik
    BMC Microbiology.2026;[Epub]     CrossRef
  • Parasalinivibrio latis gen. nov., sp. nov., isolated from the distal gut of healthy farmed Asian Seabass (Lates calcarifer)
    Shuan Er, Melissa Soh, Adrian Low, Henning Seedorf
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Acidisoma cladoniae sp. nov., an acidotolerant bacterium isolated from an Antarctic lichen
    Un Cho, Jehyun Jeon, Woohyun Kim, Soon Gyu Hong, Hyoungseok Lee, Yung Mi Lee
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Phenylobacterium ferrooxidans sp. nov., isolated from a sub-surface geothermal aquifer in Iceland
    Eva Pouder, Erwann Vince, Karen Jacquot, Maimouna batoma Traoré, Ashley Grosche, Maria Ludwig, Mohamed Jebbar, Loïs Maignien, Karine Alain, Sophie Mieszkin
    Systematic and Applied Microbiology.2025; 48(1): 126578.     CrossRef
  • Streptomyces yaizuensis sp. nov., a berninamycin C-producing actinomycete isolated from sponge
    Miku Takahashi, Kanata Hoshino, Moriyuki Hamada, Tomohiko Tamura, Ryota Moriuchi, Hideo Dohra, Youji Nakagawa, Susumu Kokubo, Motoyuki Yamazaki, Hiroyuki Nakagawa, Masayuki Hayakawa, Shinya Kodani, Hideki Yamamura
    The Journal of Antibiotics.2025; 78(1): 35.     CrossRef
  • Advanced aspects of acetogens
    Anja Poehlein, Benjamin Zeldes, Maximilian Flaiz, Tim Böer, Alina Lüschen, Franziska Höfele, Kira S. Baur, Bastian Molitor, Christian Kröly, Meng Wang, Quan Zhang, Yixuan Fan, Wei Chao, Rolf Daniel, Fuli Li, Mirko Basen, Volker Müller, Largus T. Angenent,
    Bioresource Technology.2025; 427: 131913.     CrossRef
  • Description of Hyphococcus formosus sp. nov. and Hyphococcus lacteus sp. nov., isolated from coastal sediment, and reclassification of Marinicaulis flavus as Hyphococcus luteus nom. nov. and Marinicaulis aureus as Hyphococcus aureus comb. nov
    Yu-Qi Ye, Xin-Yue Zhang, Hong-Nan Gong, Meng-Qi Ye, Zong-Jun Du
    Systematic and Applied Microbiology.2025; 48(1): 126575.     CrossRef
  • Methyloraptor flagellatus gen. nov., sp. nov., novel Ancalomicrobiaceae-affiliated facultatively methylotrophic bacteria that feed on methanotrophs of the genus Methylococcus
    Victoria A. Saltykova, Olga V. Danilova, Igor Y. Oshkin, Svetlana E. Belova, Natalia E. Suzina, Nikolai V. Pimenov, Svetlana N. Dedysh
    Systematic and Applied Microbiology.2025; 48(1): 126565.     CrossRef
  • Taxonomic and genomic characterization of a siderophore-producing bacterium, Rhodoligotrophos ferricapiens sp. nov isolated from lettuce cultivation soil
    Yu-Jin Kim, Yong-Seok Kim, Chang-Jun Cha
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Florfenicol-resistant Brevundimonas sanguinis sp. nov., a novel bacterium isolated from patient blood in South Korea
    Ji Hee Lee, Yewon An, Su Yeon Kim
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Aquibaculum sediminis sp. nov., a halotolerant bacteria isolated from salt lake sediment
    Qing-Yu Xu, Lei Gao, Dildar Wu, Xin-Yao Li, Yong-Hong Liu, Yao Zhang, Yue-Heng Chen, Ting-Ting She, Bao-Zhu Fang, Wen-Jun Li
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Infection signatures of multiple Nucleocytoviricota virus lineages in the brown algae Undaria pinnatifida revealed by population-wide genome analysis
    Hiroki Ban
    Journal of Applied Phycology.2025; 37(4): 2705.     CrossRef
  • Genomic insights into novel predatory myxobacteria isolated from human feces
    Joyasree Das, Shilpee Pal, Anu Negi, Shiva S. Sundharam, Amit Yadav, Srikrishna Subramanian, S. K. Sinha, Jayanta Samanta, Srinivasan Krishnamurthi, Jan Claesen
    Microbiology Spectrum.2025;[Epub]     CrossRef
  • Polyphasic Taxonomic Analysis of Pontitalea aquivivens gen. nov., sp. nov., Isolated from Seawater
    Jaewoo Yoon
    Current Microbiology.2025;[Epub]     CrossRef
  • Flavobacterium arundinis sp. nov., Flavobacterium calami sp. nov., Flavobacterium helocola sp. nov. and Flavobacterium flavipallidum sp. nov., isolated from stagnant water in a clump of Phragmites japonica Steud
    Sunho Park, Inhyup Kim, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Virgifigura deserti gen. nov., sp. nov., isolated from the Gurbantunggut Desert soil
    Qi Li, Zi-Qi Peng, Wen-Ling Liu, Zhen-Hao Luo, Shuai Li, Wen-Jun Li, Lei Dong
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Resolution of MALDI-TOF compared to whole genome sequencing for identification of Bacillus species isolated from cleanrooms at NASA Johnson Space Center
    Farnaz Mazhari, Aaron B. Regberg, Christian L. Castro, Michael G. LaMontagne
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Thalassobellus suaedae gen. nov., sp. nov., a marine bacterium of the family Flavobacteriaceae isolated from a halophyte Suaeda japonica
    Su Yeon Lee, Ami Rho, Jy Young Choi, Jaeho Choi, Bo Min Lee, Byung Cheol Cho, Chung Yeon Hwang
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Nocardioides eburneus sp. nov., isolated from commercial soil
    Min-Seok Kang, Jae-yon Yu, Yong Ho Kim, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Rubrolithibacter danxiaensis gen. nov., sp. nov. isolated from red sandy conglomerate in the Danxia Mountain
    Wen-Hui Lian, Huan-Huan He, Ying Wang, Zhuo-Huan Zheng, Fang Chen, Ting Zhou, Chao-Jian Hu, Jia-Rui Han, Lei Dong, Wen-Jun Li
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Bacteria in the Phylum Bacillota Degrade Nicotine Through the Variant of Pyridine and Pyrrolidine Pathway
    Xiu-Ming Liu, Xuan Hai, Cong-Jian Li, Yu-Fan Han, Xing Chen, Yu-Jin Fan, Jian Wu, En-Min Zhou, Yuan-Dong Li, Ling-Ling Yang, Yan-Qing Duan, Xiao-Yang Zhi
    Current Microbiology.2025;[Epub]     CrossRef
  • Schlesneria sphaerica sp. nov., a neutrophilic, xylan-degrading planctomycete from a mountain wetland, and emended description of the genus Schlesneria
    Irina S Kulichevskaya, Anastasia A Ivanova, Daniil G Naumoff, Anna A Zlatogorskaya, Gennady S Kachmazov, Svetlana N Dedysh
    FEMS Microbiology Letters.2025;[Epub]     CrossRef
  • Characterization of three novel Helicobacter species infecting stomachs of dogs and cats: Helicobacter gastrocanis sp. nov., Helicobacter gastrofelis sp. nov., and Helicobacter felistomachi sp. nov.
    Emiko Rimbara, Sae Aoki, Masato Suzuki, Hirotaka Kobayashi, Taisuke Nakagawa, Yuko Goto-Koshino, Sachiyo Nomura, Wan-Ying Du, Hidenori Matsui, Shigetarou Mori, Keigo Shibayama, Tsuyoshi Kenri, Koichi Ohno
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Evolution of far-red light photoacclimation in cyanobacteria
    Laura A. Antonaru, Cecilia Rad-Menéndez, Susan Mbedi, Sarah Sparmann, Matthew Pope, Thomas Oliver, Shujie Wu, David H. Green, Muriel Gugger, Dennis J. Nürnberg
    Current Biology.2025; 35(11): 2539.     CrossRef
  • Genome-based classification and phylogenetic revision of the family Colwelliaceae with proposals for new genera and species
    Min Seo Lee, Sung-Hyun Yang, Yun Jae Kim, Yeong-Jun Park, Mi-Jeong Park, Kae Kyoung Kwon
    Frontiers in Ecology and Evolution.2025;[Epub]     CrossRef
  • FastAAI: efficient estimation of genome average amino acid identity and phylum-level relationships using tetramers of universal proteins
    Kenji Gerhardt, Carlos A Ruiz-Perez, Luis M Rodriguez-R, Chirag Jain, James M Tiedje, James R Cole, Konstantinos T Konstantinidis
    Nucleic Acids Research.2025;[Epub]     CrossRef
  • Reduction of enteric methane emission using methanotroph-based probiotics in Hanwoo steers
    Tenzin Tseten, Rey Anthony Sanjorjo, Jong-Wook Son, Keun Sik Baik, Janine I. Berdos, Seon-Ho Kim, Sang-Hwal Yoon, Min-Kyoung Kang, Moonhyuk Kwon, Sang-Suk Lee, Seon-Won Kim
    Animal Microbiome.2025;[Epub]     CrossRef
  • Isolation and Characterisation of Gracilimonas aurantiaca sp. nov., A Novel Bacterium Isolated from Tidal-Flat Sediment
    Jaincy N. Jayan, Sathiyaraj Srinivasan, Sang-Seob Lee
    Current Microbiology.2025;[Epub]     CrossRef
  • Closed genomes of commercial inoculant rhizobia provide a blueprint for management of legume inoculation
    MacLean G. Kohlmeier, Graham W. O'Hara, Joshua P. Ramsay, Jason J. Terpolilli, Gladys Alexandre
    Applied and Environmental Microbiology.2025;[Epub]     CrossRef
  • Flavonifractor porci sp. nov. and Flintibacter porci sp. nov., two novel butyrate-producing bacteria of the family Oscillospiraceae
    Han-Yu Niu, Jie Zhang, Hao-Jie Huang, Xin-Wei Sun, Hao-Yu Chen, Xiao-Meng Wang, Ci Liu, Ming-Xia Bi, Shuang-Jiang Liu
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Characterisation of Aequorivita ciconiae sp. nov., isolated from oriental stork, Ciconia boyciana
    Jeong-Eun Han, Seomin Kang, So-Yeon Lee, Jin-Woo Bae
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Sulfitobacter sediminis sp. nov., a novel halophilic bacterium isolated from tidal flat sediment
    Jaincy N. Jayan, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Gracilimonas qinghaiensis sp. nov., a halophilic bacterium from a high-altitude saline lake exhibiting diverse metabolic potential and ecological adaptation
    Haohao Wang, Chi Zhang, Yaqin Chen, Yifan Guo, Lijian Ding, Shengfa Zhang, Gaijun Du, Weiyan Zhang, Shan He
    Current Research in Microbial Sciences.2025; 9: 100413.     CrossRef
  • Isolation and characterization of Sporomusa carbonis sp. nov.: a carboxydotrophic hydrogenogen in the genus of Sporomusa isolated from a charcoal-burning pile
    Tim Böer, Florian P. Rosenbaum, Lena Eysell, Volker Müller, Rolf Daniel, Anja Poehlein
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Paenibacillus zeirhizosphaerae sp. nov., isolated from surface of the maize (Zea mays) roots in a horticulture field, Hungary
    Dalma Márton, Milán Farkas, Anna Bedics, Erika Tóth, András Táncsics, Károly Bóka, Gergely Maróti, Erzsébet Baka, Balázs Kriszt, Mátyás Cserháti
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Marivivens marinum sp. nov., isolated from tidal flat, Gochang, South Korea
    Min-Seok Kang, Hyung-Seop Kim, Jae-yon Yu, Sathiyaraj Srinivasan, Sang-Seob Lee
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Jannaschia maritima sp. nov., a novel marine bacterium isolated from the biofilm of concrete breakwater structures
    Hao Feng, Shuyi Liang, Ruisi Li, Hui Wang, Runlin Cai
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Ascidiimonas meishanensis sp. nov. and Leptobacterium meishanense sp. nov., two bacteria isolated from marine sediment in the East China Sea
    Hao Wang, Huiting Wang, Xinyu Liu, Dawoon Jung, Eun-Young Seo, Shan He, Weiyan Zhang, Lijian Ding
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Meridianimarinicoccus marinus sp. nov., Isolated from Tidal Flat
    Min-Seok Kang, Jae-Yon Yu, Hyung-Seop Kim, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
    Current Microbiology.2025;[Epub]     CrossRef
  • Taklimakanibacter albus sp. nov., an Endophytic Bacterial Species Isolated from the Root of Paris polyphylla var. yunnanensis
    Jin-Yu Tian, Zhen Zhang, Yu Zhao, Xiao-Yang Zhi, Ling-Ling Yang
    Current Microbiology.2025;[Epub]     CrossRef
  • Comprehensive genomic and functional analysis of Leuconostoc lactic acid bacteria in alcohol and acetaldehyde metabolism
    Joo-Han Gwak, Yun Ji Choi, Hina Ayub, Min Kyeong Seol, Hongik Kim, Man-Young Jung
    Journal of Microbiology.2025; 63(2): e2410026.     CrossRef
  • Comamonas squillarum sp. nov., Isolated from Intestine of Red Swamp Crayfish (Procambarus clarkii)
    Shi Shi, Dao-Feng Zhang, Hong-Chuan Wang, Fu-Hui Jiang, Li-Fan Cui, Ying Huang
    Current Microbiology.2025;[Epub]     CrossRef
  • Limibacterium fermenti gen. nov., sp. nov., a novel member of the family Dysgonomonadaceae isolated from the Chinese strong aroma-type Baijiu fermentation system
    Yang Gu, Huilin Wang, Xia Zhang, Zhiyun Peng, Jian Su, Dong Zhao, Jia Zheng
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Inconstantimicrobium mannanitabidum sp. nov., a novel member of the family Clostridiaceae isolated from anoxic soil under the treatment of reductive soil disinfestation
    Atsuko Ueki, Akio Tonouchi, Sachi Honma, Nobuo Kaku, Katsuji Ueki
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Halomonas pelophila sp. nov., isolated from mud and Halomonas aquatica sp. nov., isolated from marine water
    Subin Yook, Inhyup Kim, Sunho Park, Haejin Woo, Hyunji Lee, Taegun Seo
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Metabolic redundancy and specialisation of novel sulfide-oxidizing Sulfurimonas and Sulfurovum along the brine-seawater interface of the Kebrit Deep
    Rayyan Alamoudi, Alan Barozzi, Grégoire Michoud, Marc W. Van Goethem, Charlene Odobel, Yue Chen, Ramona Marasco, Daniele Daffonchio
    Environmental Microbiome.2025;[Epub]     CrossRef
  • Three Novel Bacterial Species, Roseateles flavus sp. nov., Roseateles paludis sp. nov., and Roseateles hydrophilus sp. nov., Isolated from Various Water-Related Environments
    Haejin Woo, Geeta Chhetri, Inhyup Kim, Sunho Park, Hyunji Lee, Subin Yook, Taegun Seo
    Current Microbiology.2025;[Epub]     CrossRef
  • Taxonomic, genomic, and ecological insights into a novel Flavobacteriaceae strain from coastal tidal flats
    Haohao Wang, Jiahui Liu, Yifan Guo, Yaqin Chen, Chi Zhang, Shan He, Weiyan Zhang, Lijian Ding
    BMC Microbiology.2025;[Epub]     CrossRef
  • High diversity of nitrifying bacteria and archaea in biofilms from a subsea tunnel
    Linnea F M Kop, Hanna Koch, Paula Dalcin Martins, Carolina Suarez, Sabina Karačić, Frank Persson, Britt-Marie Wilén, Per Hagelia, Mike S M Jetten, Sebastian Lücker
    FEMS Microbiology Ecology.2025;[Epub]     CrossRef
  • Dethiothermospora halolimnae gen. nov., sp. nov., a novel moderately halophilic, thermotolerant, bacterium isolated from a brine lake
    Luke A. Fisher, Saloni R. Dangre, Arthur Odenheimer, Nirav Patel, Peter T. Doran, Jeff S. Bowman, Britney E. Schmidt, Douglas H. Bartlett
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Whole genome sequence data of Mycolicibacterium parafortuitum Panama NTM 1 from a dairy farm in Panama
    Johanna Elizabeth Ku, Alejandro Llanes, Francisco Guizado-Batista, Emmanuel Hernández-Ricord, Amanda Ramírez-Casanova, Pave Mislov-Vallarino, Alexa Prescilla-Ledezma, Nicolas Torrales, Fermín Acosta, Amador Goodridge, Nora Ortiz de Moreno
    Data in Brief.2025; 59: 111368.     CrossRef
  • Genomic and functional characterization of the Pantoea ananatis nfd35 strain, a potential biocontrol agent of anthracnose disease in Trichosanthes kirilowii Maxim
    Ziang He, Feng Zhu, Shuzhen Sun, Ying Zhang, Rui Min, Huixiang Yang, Leiming Xu, Dengke Yin, Weifang Xu
    Physiological and Molecular Plant Pathology.2025; 138: 102683.     CrossRef
  • Growth physiology, genomics, and proteomics of Desulfurivibrio dismutans sp. nov., an obligately chemolithoautotrophic, sulfur disproportionating and ammonifying haloalkaliphile from soda lakes
    Dimitry Y. Sorokin, Alexander Y. Merkel, Rustam H. Ziganshin, Ilya V. Kublanov
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Isolation of a putative sulfur comproportionating microorganism
    Heidi S. Aronson, Douglas E. LaRowe, Jennifer L. Macalady, Jan P. Amend
    Scientific Reports.2025;[Epub]     CrossRef
  • Phylogenomics as baseline for taxonomy description: Amphibiibacter pelophylacis gen. nov., sp. nov., a novel taxon of the family Sphaerotilaceae, class Betaproteobacteria, isolated from the skin microbiota of Pelophylax perezi from different populations
    Sara Costa, Diogo Neves Proença, Isabel Lopes, Paula V. Morais
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Harmony in diversity: Reorganizing the families within the order Pseudomonadales
    José David Flores-Félix, Paula García-Fraile, Zaki Saati-Santamaría
    Molecular Phylogenetics and Evolution.2025; 206: 108321.     CrossRef
  • A novel carotenoid-producing bacterium, Paenibacillus roseopurpureus sp. nov., isolated from Korean marine mud
    Chi Young Hwang, Eui-Sang Cho, Young-Do Nam, So-Lim Park, Seong-Il Lim, Myung-Ji Seo
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Novel thermophilic hydrolytic bacterium Rarispira pelagica gen. nov., sp. nov., reclassification of Spirochaeta thermophila as Winmispira thermophila gen. nov., comb. nov., and proposal of Winmispiraceae fam. nov. and Winmispirales ord. nov. in the class
    Olga A. Podosokorskaya, Anastasiia I. Maltseva, Alexander G. Elcheninov, Andrei A. Novikov, Kseniya S. Zayulina, Alexander Y. Merkel
    Systematic and Applied Microbiology.2025; 48(3): 126604.     CrossRef
  • Novosphingobium rhizovicinum sp. nov. and Novosphingobium kalidii sp. nov., two novel species isolated from rhizosphere soil and a root of halophyte Kalidium cuspidatum
    Rui-Qi Sun, Wen-Xia Dong, Jia-Hui Zeng, Hua-Mei Wei, Lian Xu, Ji-Quan Sun
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Probiotic Potential of Enterococcus lactis GL3 Strain Isolated from Honeybee (Apis mellifera L.) Larvae: Insights into Its Antimicrobial Activity Against Paenibacillus larvae
    Manhong Ye, Yinhong Jiang, Qiannan Han, Xiaoyuan Li, Chuang Meng, Chao Ji, Feng Ji, Bin Zhou
    Veterinary Sciences.2025; 12(2): 165.     CrossRef
  • Pelomonas baiyunensis sp. nov., Pelomonas candidula sp. nov., Pelomonas dachongensis sp. nov., Pelomonas lactea sp. nov., Pelomonas margarita sp. nov., Pelomonas nitida sp. nov., Pelomonas parva sp. nov. and Roseateles rivi sp. nov., isolated
    Huibin Lu, Guannan Li, Shan Yu
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Structure and mechanism of the Zorya anti-phage defence system
    Haidai Hu, Philipp F. Popp, Thomas C. D. Hughes, Aritz Roa-Eguiara, Nicole R. Rutbeek, Freddie J. O. Martin, Ivo Alexander Hendriks, Leighton J. Payne, Yumeng Yan, Dorentina Humolli, Victor Klein-Sousa, Inga Songailiene, Yong Wang, Michael Lund Nielsen, R
    Nature.2025; 639(8056): 1093.     CrossRef
  • Liberiplasma polymorphum gen. nov., sp. nov., a novel cell-wall-less free-living anaerobe, isolated from a terrestrial mud volcano, and proposal of Liberiplasmataceae fam. nov. and Liberiplasmatales ord. nov
    M.A. Khomyakova, A.Y. Merkel, A.A. Novikov, A.I. Slobodkin
    Systematic and Applied Microbiology.2025; 48(4): 126629.     CrossRef
  • Opacimonas immobilis sp. nov., a novel non-flagellated Alteromonadaceae species with the smallest genome isolated from the phycosphere of the diatom Actinocyclus curvatulus
    Xiaoyu Yang, Xuanru Lin, Runlin Cai, Hui Wang, Guanjing Cai
    Archives of Microbiology.2025;[Epub]     CrossRef
  • Draft genome sequence of Desulfobacterota strain M19, a mesophilic sulfur-disproportionating bacterium from a deep-sea hydrothermal vent on the Mid-Atlantic Ridge
    Marie Hemon, Lukáš Novák, Maxime Allioux, Léna Ailliot, Erwann Vince, Karine Alain, Simon Roux
    Microbiology Resource Announcements.2025;[Epub]     CrossRef
  • Identification and functional genomic analyses of Bartonella isolates from honey bees, and reassessment of the taxonomy of the genus Bartonella
    Juliana Botero, Nikolas Basler, Margo Cnockaert, Charlotte Peeters, Maria Schreiber, Manja Marz, Dirk C. de Graaf, Jelle Matthijnssens, Peter Vandamme
    Systematic and Applied Microbiology.2025; 48(4): 126625.     CrossRef
  • Pseudidiomarina salilacus sp. nov., a novel bacterium of the genus Pseudidiomarina isolated from sediment in Yuncheng Salt Lake
    Hui-Ying Yu, Jia-Tan Wei, Chuan-Xu Wang, Zhuo Wang, Ya-Jie Niu, Wen-Jun Li, Bao-Zhu Fang, Hao-Ran Guo, Xin Li
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Microbial dark matter spearheading the biogeochemical cycle in the Solar Lake of Taba, Egypt
    Rehab Z. Abdallah, Ali H.A. Elbehery, Amged Ouf, Rania Siam
    Current Research in Microbial Sciences.2025; 9: 100433.     CrossRef
  • Draft genome sequence of an Acinetobacter courvalinii isolate from Africa
    Ahmed Olowo-Okere, E. Skiebe, G. Wilharm, Simon Roux
    Microbiology Resource Announcements.2025;[Epub]     CrossRef
  • Phycobium rhodophyticola gen. nov., sp. nov. and Aliiphycobium algicola gen. nov., sp. nov., isolated from the phycosphere of marine red algae
    Jeong Min Kim, Woonhee Baek, Byeong Jun Choi, Hülya Bayburt, Jae Kyeong Lee, Sung Chul Lee, Che Ok Jeon
    Journal of Microbiology.2025; 63(6): e2503014.     CrossRef
  • Isolation and characterization of Fibrella aquatica sp. nov. from freshwater, Fibrella musci sp. nov. from moss on soil and Fibrella arboris sp. nov. from moss on a tree
    Chunghwan Baek, Inhyup Kim, Sunho Park, Haejin Woo, Hyunji Lee, Subin Yook, Seunghui Kwak, Jisu Kim, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Synergy between anammox bacteria and a novel glycogen-accumulating organism in domestic sewage treatment under carbon-poor conditions
    Hanbin Wang, Qiong Zhang, Jialin Li, You Wu, Xiyao Li, Liang Zhang, Yongzhen Peng
    Chemical Engineering Journal.2025; 520: 165931.     CrossRef
  • Aestuariibius violaceus sp. nov., isolated from a marine limpet Cellana toreuma
    Min Seo Lee, Mi-Jeong Park, Purena Son, Taekeun Rho, Kae Kyoung Kwon, Jin-Sook Park
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Reclassification of Moraxella boevrei, M. osloensis and M. atlantae, into the genus Faucicola, and proposal of a new genus within the family Moraxellaceae, Lwoffella lincolnii gen. nov., comb. nov., to accommodate the divergent species Moraxella lincolnii
    Imed Sbissi, Ikram Kammoun, Haifa El May, Tesnim Bouzidi, Faten Ghodhbane-Gtari, Maher Gtari
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Pyranulibacter aquaticus gen. nov., sp. nov., the first nitrate-reducing representative of the class Ignavibacteria from an Iturup well
    Olga A. Podosokorskaya, Alexander Y. Merkel, Andrei A. Novikov, Alexandra A. Klyukina, Alexander G. Elcheninov
    Systematic and Applied Microbiology.2025; 48(5): 126639.     CrossRef
  • Challenges in the Identification of Environmental Bacterial Isolates from a Pharmaceutical Industry Facility by 16S rRNA Gene Sequences
    Juliana Nunes Ramos, Luciana Veloso da Costa, Verônica Viana Vieira, Marcelo Luiz Lima Brandão
    DNA.2025; 5(3): 33.     CrossRef
  • Insights into the bacterial fraction of sediments from the South China Sea: physiological, chemotaxonomic, and genomic characterization of seven novel members of the Bacillaceae family
    Shu-Tong Ge, Hong Cheng, Ying-Wen Zhong, Jia-Ling Tang, Xin-Yue Huang, Bin Wei, Yue-Hong Wu, Chun-Sheng Wang
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Robertkochia aurantiaca sp. nov., and Robertkochia flava sp. nov., two potential quinate- and catechol-degrading bacteria isolated from tidal-flat sediments
    Jaincy N. Jayan, Young-Mi Lee, Ye-ji You, Sathiyaraj Srinivasan, Sang-Seob Lee
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Machine learning models for delineating marine microbial taxa
    Stilianos Louca
    NAR Genomics and Bioinformatics.2025;[Epub]     CrossRef
  • Vibrio iocasae sp. nov., a bacterium isolated from the gill homogenate of bivalve lucinids Indoaustriella scarlatoi in intertidal mangrove sediments
    Jia Luo, Huan Zhang, Ziyun Ye, Fei Li, Zhaoshan Zhong, Jiacheng Wang, Minxiao Wang, Chaolun Li
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • PhyloScape: interactive and scalable visualization platform for phylogenetic trees
    Jiajia Wang, Bo Zhang, Linglu Zheng, Yan Chen, Chunyang Zhang, Guojiao Lin, Zhen Meng, Xuezhi Wang, Yuanchun Zhou
    BMC Bioinformatics.2025;[Epub]     CrossRef
  • Astrobacterium formosum gen. nov., sp. nov., a novel psychrotolerant rosette-forming bacterium from a laboratory psychrophilic EGSB bioreactor
    V.V. Potokina, S.N. Parshina, A.Y. Merkel, A.G. Elcheninov, A.V. Vishnyakova, A.N. Avtukh, N.A. Kostrikina, V.M. Tereshina, Y.V. Litti
    Systematic and Applied Microbiology.2025; 48(5): 126640.     CrossRef
  • Thermohahella caldifontis gen. nov., sp. nov., a thermo-halophilic bacterium isolated from a hot spring
    Dariimaa Ganbat, Sondor Ganbat, Bo Hyeon Park, Min Kyeong Kim, Jae-Yoon Sung, Won-Jae Chi, Seong-Bo Kim, Dong-Woo Lee, Sang-Jae Lee
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Genome-based reclassification of Blautia coccoides (Kaneuchi et al. 1976) Liu et al. 2008 as a later heterotypic synonym of Blautia producta (Prévot 1941) Liu et al. 2008
    Mehdi Fatahi-Bafghi
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Genomic characterization of Gillisia xinjiangensis sp. nov.: insights into nitrogen metabolism, stress adaptation, and application potential
    Hao-hao Wang, Chi Zhang, Ya-qin Chen, Yi-fan Guo, Li-jian Ding, Sheng-fa Zhang, Gai-jun Du, Wei-yan Zhang, Shan He
    Systematic and Applied Microbiology.2025; 48(5): 126645.     CrossRef
  • Duganella hordei sp. nov., Duganella caerulea sp. nov., and Duganella rhizosphaerae sp. nov., isolated from barley rhizosphere
    Katsumoto Kishiro, Nurettin Sahin, Daisuke Saisho, Naoki Yamaji, Jun Yamashita, Yuki Monden, Tomoyuki Nakagawa, Keiichi Mochida, Akio Tani
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Carnimonas bestiolae sp. nov. and Cernens ardua gen. nov., sp. nov.: new halotolerant bacteria from the invasive solitary bee Megachile sculpturalis
    Juliana Botero, Margo Cnockaert, Yakun Zhang, Charlotte Peeters, Peter Vandamme
    Systematic and Applied Microbiology.2025; 48(5): 126648.     CrossRef
  • Radicibacter daui, gen. nov., sp. nov., isolated from tomato rhizosphere soil and proposal of Radicibacteraceae fam. nov. and Radicibacterales ord. nov.
    Joo Hwan Kwon, Lemessa Etana Bultum, Seongmin Lee, Sang-Moo Lee, Minseo Choi, Seon-Woo Lee
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Pseudoduganella rhizocola sp. nov., Isolated from Rhizospheric Soil
    Shakiba S. Chegini, Jaincy N. Jayan, Yong Ho Kim, Sathiyaraj Srinivasan, Sang-Seob Lee
    Current Microbiology.2025;[Epub]     CrossRef
  • Alicycliphilus soli sp. nov., Isolated from a Plastic Film Greenhouse Soil and the Proposal for the Reclassification of Diaphorobacter limosus as Alicycliphilus limosus comb. nov.
    Xinyu Liu, Hailong Liang, Yingying Liu, Huijun Zhang, Hui Han, Bingyue Xin, Xiaomin Wu, Feng Li, Man Song, Long Zhang
    Current Microbiology.2025;[Epub]     CrossRef
  • Genome-resolved insights into the bacterial phylum WOR-3: hydrogenotrophic metabolism and unique carbon fixation via archaeal form III RuBisCO
    Jianxiong Zeng, Wenzhe Hu, Licao Chang, Zhengshuang Hua, Geng Wu, Yun Fang, Guowei Wang, Chunqiao Xiao, Jun Liu, Michaeline B. N. Albright
    mSystems.2025;[Epub]     CrossRef
  • Multiple-omics analysis of three novel haloalkaliphilic species of Kocuria revealed that the phenolic acid-degrading abilities are ubiquitous in the genus
    Lian Xu, Rui-Qi Sun, Jia-Hui Zeng, Hua-Mei Wei, Biao Shen, Ji-Quan Sun
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Isolation of diverse Undibacterium-related strains from alpine lakes and re-examining the taxonomic status of this genus
    Hui-Bin Lu, Ling-Yang Kong, Li Chen, Guang-Jie Chen, Jian-Jun Wang
    Systematic and Applied Microbiology.2025; 48(6): 126661.     CrossRef
  • Metagenomic binning reveals community and functional characteristics of sulfur- and methane-oxidizing bacteria in cold seep sponge ground
    Yan Wang, Lin Gong, Dong Dong, Xinzheng Li
    Environmental Microbiome.2025;[Epub]     CrossRef
  • Comprehensive genomic analysis of Sinorhizobium meliloti isolates associated with fenugreek (Trigonella foenum-graecum Linn.) from diverse agroclimatic regions of India
    Mitesh Khairnar, Saleh S. Alhewairini, Swapnil Chandrakant Kajale, Vagish Dwibedi, Jayanthi Barasarathi, Andrea Mastinu, Riyaz Sayyed
    Chemical and Biological Technologies in Agriculture.2025;[Epub]     CrossRef
  • Description of Fulverythrobacter ferritrahens gen. nov., sp. nov., a Siderophore-Producing Bacterium Isolated from Poultry Manure Compost and Reclassification of Caenibius fulvus and Altererythrobacter segetis as Fulverythrobacter fulvus Comb. nov. and Cr
    Shih-Yao Lin, Asif Hameed, Tzu-Yu Lin, Chiu-Chung Young
    Current Microbiology.2025;[Epub]     CrossRef
  • Reclassification of Pseudomonas boreopolis Gray and Thornton 1928 (Approved Lists 1980) as Xanthomonas boreopolis comb. nov. and Pseudomonas carboxydohydrogena (ex Sanjieva and Zavarzin 1971) Meyer et al. 1980 as Afipia carboxydohydrogena comb. nov. based
    Mehdi Fatahi-Bafghi
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Description of Neorhizobium tunisiense sp. nov., reclassification of Neorhizobium xiangyangii as Pseudorhizobium xiangyangii comb. nov. and proposal of Terrirhizobium terrae gen. nov., comb. nov. to accommodate the divergent species Aliirhizobium terrae
    Imed Sbissi, Dhouha Boussoufa, Ikram Kammoun, Rihab Hamra, Hana Dali, Mohamed Tarhouni, Maher Gtari
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Taxonomic and metabolic diversity of microbial communities in a thermal water stream in Uzbekistan and proposal of two new classes of uncultivated bacteria, Desulfocorpusculia class. nov. and Tepidihabitantia class. nov., named following the rules of SeqC
    Galina B. Slobodkina, Alexander Y. Merkel, Kseniya V. Kondrasheva, Alexandra R. Stroeva, Elizaveta A. Bonch-Osmolovskaya, Kahramon D. Davranov, Alexander I. Slobodkin
    Systematic and Applied Microbiology.2025; 48(5): 126650.     CrossRef
  • Qipengyuania marincola sp. nov., Qipengyuania flavescens sp. nov. and Pseudoblastomonas aquimaris sp. nov., three novel members of the family Erythrobacteraceae isolated from seawater
    Tian-Pu Li, Dao-Feng Zhang, Zi-Yue Fu, Meng-Han Huang
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • New Isolates of Betachloroviruses Shed Light on the Diversity and Biological Complexity of an Unexplored Group of Giant Algal Viruses
    Júlia W. Souza, Lethícia R. Henriques, Roger M. Carlson, Bruna B. F. Botelho, João Victor R. P. Carvalho, João Pedro N. Santos, Eric R. G. R. Aguiar, Irina V. Agarkova, James L. Van Etten, David D. Dunigan, Rodrigo A. L. Rodrigues
    Viruses.2025; 17(8): 1096.     CrossRef
  • Adaptation strategies of iron-oxidizing bacteria Gallionella and Zetaproteobacteria crossing the marine–freshwater barrier
    Petra Hribovšek, Emily Olesin Denny, Achim Mall, Håkon Dahle, Ida Helene Steen, Runar Stokke, Christa M. Schleper
    mBio.2025;[Epub]     CrossRef
  • Genomic diversity and adaptation in Arctic marine bacteria
    Michael C. Sadler, Matthias Wietz, Sayaka Mino, Robert M. Morris, Stephen J. Giovannoni
    mBio.2025;[Epub]     CrossRef
  • Microbial diversity and functional potential of the Halobates melleus (Heteroptera: Gerridae) microbiome from the Red Sea coastline
    Juan David Escobar-Prieto, Marc W. Van Goethem, Bob Vernooij, Chakkiath Paul Antony, Lanna Cheng, Himanshu Mishra, Ramona Marasco, Daniele Daffonchio
    Environmental Microbiome.2025;[Epub]     CrossRef
  • Taxonomy for clinicians – recent changes in names of anaerobic species with pathogenic or probiotic properties
    Lyudmila Boyanova, Raina Gergova, Rumyana Markovska
    Anaerobe.2025; 96: 103002.     CrossRef
  • Expansion and revision of the genus Xanthobacter and proposal of Roseixanthobacter gen. nov.
    Maximillian P. M. Soltysiak, Amogh P. Jalihal, Caroline E. Christophersen, Audrey L. H. Ory, Andrew D. Lee, Jessica Boulton, Michael Springer
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Ovoidimarina sediminis gen. nov., sp. nov., a novel member of the Roseobacteraceae isolated from tidal flat sediment
    Akila Kathiresan, Jaincy N. Jayan, Hee-Su Kim, Hyung-Seop Kim, Cong Li, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Whole Genome Sequencing-Based Taxonomic Identification of Dulcitol-Positive Cronobacter dublinensis subsp. beijingensis subsp. nov. and Cronobacter dublinensis subsp. infanticibi subsp. nov. from Infant Cereals in China
    Xin Gan, Menghan Li, Fengqin Li, Jianyun Zhao, Hui Li, Séamus Fanning, Yinping Dong, Li Bai
    Current Microbiology.2025;[Epub]     CrossRef
  • Characterization of Sulfitobacter sediminivivens sp. nov., A Novel Halotolerant, Nitrogen-Assimilating Bacterium from Tidal Flat Sediment
    Akila Kathiresan, Hee-Yeon Park, Hyung-Seop Kim, Cong Li, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
    Current Microbiology.2025;[Epub]     CrossRef
  • Genome insights into the Bacillus paramycoides RZ3MS14: a multitrait plant growth-promoting rhizobacterium from Amazonian rainforest able to improve the sugarcane growth
    Gladys Angélica Apaza-Castillo, Guilherme Kenichi Hosaka, Carolina Alessandra de Almeida Hayashibara, Renan Fantine, Manuella Nóbrega Dourado, Mauricio Santos Rosa, Heloísa Defant, Maria Carolina Quecine, Euan James
    FEMS Microbiology Letters.2025;[Epub]     CrossRef
  • Genome-based classification of Halonovum salinarum gen. nov., sp. nov., and Halonovum rutilum sp. nov., two novel halophilic archaea isolated from a solar saltern
    Chi Young Hwang, Eui-Sang Cho, Ki-Eun Lee, Eun-Young Lee, Myung-Ji Seo
    BMC Microbiology.2025;[Epub]     CrossRef
  • Puribacter membranae gen. nov., sp. nov., isolated from a biofilm of a membrane bioreactor (MBR) treating sewage
    Masashi Hatamoto
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Genome-based classification of Paraniabella aurantiaca gen. nov., sp. nov., isolated from soil and taxonomic reclassification of five species within the genus Niabella
    Yong-Seok Kim, Yerang Yang, Miryung Kim, Do-Hoon Lee, Chang-Jun Cha
    Journal of Microbiology.2025; 63(10): e2505005.     CrossRef
  • Gudongella ferriphila sp. nov., an Anaerobic Bacterium Isolated from a Terrestrial Mud Volcano
    G. Slobodkina, A. Merkel, D. Kopitsyn, A. Slobodkin
    Microbiology.2025; 94(6): 893.     CrossRef
  • Genomic characterization of Microbacterium meiriae sp. nov., a novel bacterium isolated from the International Space Station
    Fathi Karouia, Lorraine Christine de Oliveira, Asif Hameed, Anna Simpson, Nitin Singh, Punchappady D. Rekha, Christopher E. Mason, Kasthuri Venkateswaran
    Scientific Reports.2025;[Epub]     CrossRef
  • Genome insights into Hydrogenophaga taeniospiralis and its R-body genetic determinants
    Jorge Lalucat, Antonio Busquets, Magdalena Mulet, Raúl Riesco, Elena García-Valdés, Margarita Gomila
    Systematic and Applied Microbiology.2025; 48(6): 126664.     CrossRef
  • Denitraticella aggregata gen. nov., sp. nov. a denitrifying benzoate-utilizing bacterium isolated from a terrestrial mud volcano
    Galina Slobodkina, Alexander Merkel, Andrei Novikov, Alexander Slobodkin
    Systematic and Applied Microbiology.2025; 48(6): 126665.     CrossRef
  • Extensive cultivation of human gut phages revealing undescribed Bacteroidaceae phages
    Zhe Liu, Yaoyu Yang, Sihong Mao, Zhaoqi Wang, Qiheng Zhu, Yuyu Yuan, Ye Xiang
    Gut Microbes.2025;[Epub]     CrossRef
  • Comparative Analysis of Evolutionary Distances Using the Genus Mycobacterium
    Danila Zimenkov, Anastasia Ushtanit
    International Journal of Molecular Sciences.2025; 26(21): 10471.     CrossRef
  • Fast and robust estimate of bacterial genus novelty using the percentage of conserved proteins with unique matches (POCPu)
    Charlie Pauvert, Thomas C.A. Hitch, Thomas Clavel
    PeerJ.2025; 13: e20259.     CrossRef
  • Acid tolerance and metabolic potential of comammox and nitrite-oxidizing Nitrospira enriched from soil
    Yu Takahashi, Hirotsugu Fujitani, Itsuki Taniguchi, Yasuhiro Gotoh, Yuta Shimada, Shuto Ikeda, Tetsuya Hayashi, Kanako Tago, Masahito Hayatsu, Satoshi Tsuneda
    ISME Communications.2025;[Epub]     CrossRef
  • Quyinboa mangrovi gen. nov., sp. nov., Quyinboa ferrireducens sp. nov., and Quyinboa sediminis sp. nov., three novel Fe(III)-reducing and nitrogen-fixing bacteria isolated from mangrove sediment, and the proposal of Quyinboaceae fam. nov. within the class
    Xiao-Xuan Song, Le Liu, Guan-Jun Chen, Zhenxing Xu, Zong-Jun Du
    Systematic and Applied Microbiology.2025; 48(6): 126668.     CrossRef
  • Solicola agrisoli sp. nov., a novel actinobacterium isolated from agricultural soil in Republic of South Korea
    Syed Muhammad Khizar Shah, Cong Li, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Widespread potential for phototrophy and convergent reduction of lifecycle complexity in the dimorphic order Caulobacterales
    Joel Hallgren, Jennah E. Dharamshi, Alejandro Rodríguez-Gijón, Julia Nuy, Sarahi L. Garcia, Kristina Jonas
    Nature Communications.2025;[Epub]     CrossRef
  • Integrated genomic and mutagenesis analysis of Pseudomonas argentinensis SA190 reveals mechanisms of plant root colonization and stress resilience
    Büsra Elkatmis, Sabiha Parween, Abdul Aziz Eida, Rewaa Jalal, Feras Lafi, Intikhab Alam, Stanislav Kopriva, Heribert Hirt, Maged M. Saad
    BMC Microbiology.2025;[Epub]     CrossRef
  • Paraburkholderia suaedae sp. nov., a Potential Plant Growth-Promoting Bacterium Isolated from the Halophyte Suaeda japonica
    Sunho Park, Hyunji Lee, Subin Yook, Chunghwan Baek, Jisu Kim, Seunghui Kwak, Taeho Na, Taegun Seo
    Microorganisms.2025; 13(11): 2498.     CrossRef
  • Genomic and phenotypic insights into the expanding phylogenetic landscape of the Cryptococcus genus
    Marco A. Coelho, Márcia David-Palma, Aleksey V. Kachalkin, Miroslav Kolařík, Benedetta Turchetti, José Paulo Sampaio, Michael J. Wingfield, Matthew C. Fisher, Andrey M. Yurkov, Joseph Heitman, Geraldine Butler
    PLOS Genetics.2025; 21(11): e1011945.     CrossRef
  • Nocardioides secundeburneus sp. nov. and Gordonia aurantiaca sp. nov., isolated from soil
    Jisu Kim, Inhyup Kim, Sunho Park, Haejin Woo, Hyunji Lee, Subin Yook, Jung-Hoon Yoon, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Acinetobacter zhairhuonensis sp. nov., isolated from sediments of the East China Sea
    Qian Jiang, Yike Wang, Kaiwen Zheng, Yuangui Tang, Yunlu Cui, Qunjian Yin, Daoqiong Zheng, Jinzhong Xu, Daxiong Ji, Dongdong Zhang, Sanjit Chandra Debnath, Pinmei Wang
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Youngimonas ophiurae sp. nov., a Quorum-Quenching Marine Bacterium Isolated from a Brittle Star in the South China Sea, and Reclassification of Lutimaribacter litoralis as Youngimonas litoralis comb. nov.
    Zengzhi Liu, Meng Zhang, Qiliang Lai, Shanshan Xu, Ying Xu
    Microorganisms.2025; 13(12): 2661.     CrossRef
  • Diversity, metabolic potential and global distribution of the anaerobic fermentative bacteria Phylum Candidatus Cloacimonadota
    Yi Liu, Min Yu, Xing Chen, Lingman Ran, Xiao-Hua Zhang
    Environmental Microbiome.2025;[Epub]     CrossRef
  • Genomic and Metabolomic Characterization of Kitasatospora griseola JNUCC 62 from Mulyeongari Oreum and Its Cosmeceutical Potential
    Mi-Sun Ko, Mi-Yeon Moon, Chang-Gu Hyun
    Fermentation.2025; 11(12): 671.     CrossRef
  • A machine learning approach to predict strain-specific phage-host interactions
    Pamela Yael Camejo, Felipe Rojas, Antonio Ossa, Rodrigo Hurtado, Daniel Tichy, Christian Pieringer, Michael Pino, Paola Mora-Uribe, Soledad Ulloa, Rodrigo Norambuena, Eduardo Tobar-Calfucoy, Matías Aguilera, Victoria Rojas-Martínez, Onix Cifuentes, Andrea
    Scientific Reports.2025;[Epub]     CrossRef
  • Description of high-altitude, cold-adaptive, metabolically versatile Dyadobacter aurulentus sp. nov. isolated from Western Himalayan farmland soils
    Amit Yadav, Kiran Kirdat, Vipool Thorat, Ngangyola Tuikhar, Kirti Chundawat, Tushar Lodha, Bhavesh Tiwarekar, Umera Patwekar, Malad Mubarak, Shuchi Shastri, Saurabh Kumar, Yogesh Shouche, Reeta Goel, Rup Lal
    Microbiology Spectrum.2025;[Epub]     CrossRef
  • Billgrantia hypersalina sp. nov. LNSP4103-1T: A Halotolerant Bioplastic-Producing Bacterium from Saline Agricultural Soil
    Pedro Mauricio Moran-Olvera, Joseph Guevara-Luna, Ivan Arroyo-Herrera, Violeta Larios-Serrato, César Mateo Flores-Ortiz, Luis Barbo Hernández-Portilla, Edgar López-Villegas, Paulina Estrada-de los Santos, Juan Alfredo Hernández-García, María Soledad Vásqu
    Microorganisms.2025; 13(12): 2683.     CrossRef
  • Identification of robust species-specific marker genes for the demarcation of the Klebsiella pneumoniae–quasipneumoniae–variicola complex
    Mustafa Galib, Viet Hung Nguyen
    Journal of Medical Microbiology .2025;[Epub]     CrossRef
  • Novel insights into the genome organization of Rhizobiaceae: identification of linear plasmids
    Nemanja Kuzmanovic, Ryan R. Wick, Michał Kalita, Joanna Puławska, George C. diCenzo, Michael F. Hynes, Kornelia Smalla, Doreen Babin, Torsten Thünen
    Microbial Genomics .2025;[Epub]     CrossRef
  • Putative promiscuous symbionts in deep-sea corals and crinoids may contribute to nitrogen cycling
    Flúvio Modolon, Alessandro N. Garritano, Lilian J. Hill, Gustavo Duarte, Amanda Bendia, Rafael de Moura, Vivian Pellizari, Torsten Thomas, Raquel S. Peixoto
    Microbiome.2025;[Epub]     CrossRef
  • Croceiramulus getboli gen. nov., sp. nov., a marine bacterium isolated from the tidal flat
    Yeonjae Yoo, Sang Hyun Lee, Dae Young Kwon, Jong Seong Khim, Xiaoyue Xu, Bogun Kim, In-Geol Choi, Jae-Jin Kim
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Genome-based reclassification of Fontibacillus solani Ramirez-Bahena et al. 2015 as a later heterotypic synonym of Fontibacillus panacisegetis Lee et al. 2011
    Aleyna Nalcaoglu Senocak, Kadriye Inan Bektas, Sabriye Canakci, Ali Osman Belduz
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Methylomonas stagni sp. nov., a methanotroph of the genus Methylomonas, from a reservoir pond in Korea
    Joo-Han Gwak, Chanmee Seo, Yongman Kim, Joong-Wook Park, Sung-Keun Rhee
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Genome-based reclassification of Metallosphaera prunae as a later heterotypic synonym of Metallosphaera sedula
    Pooja, Preeti Yadav, Abhilash Kumar, Princy Hira, Charu Dogra Rawat, Rup Lal, Utkarsh Sood
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Genome-Based Reclassification of [Bizionia] algoritergicola Bowman and Nichols 2005 as Algorimicrobium algoritergicola gen. nov., comb. nov. and description of Algorimicrobium bowmanii sp. nov.
    Valeriya Kurilenko, Evgeniya Bystritskaya, Nadezhda Otstavnykh, Peter Velansky, Sergey Baldaev, Viacheslav Eremeev, Natalya Ageenko, Konstantin Kiselev, Olga Nedashkovskaya, Marina Isaeva
    Microorganisms.2025; 14(1): 24.     CrossRef
  • Bulleidia extructa PP_925: Genome Reduction, Minimalist Metabolism, and Evolutionary Insights into Firmicutes Diversification
    Peter V. Evseev, Irina V. Podoprigora, Andrei V. Chaplin, Zurab S. Khabadze, Artem A. Malkov, Lyudmila I. Kafarskaia, Dmitriy A. Shagin, Yulia N. Urban, Olga Yu. Borisova, Boris A. Efimov
    International Journal of Molecular Sciences.2025; 27(1): 448.     CrossRef
  • LINgroups as a Robust Principled Approach to Compare and Integrate Multiple Bacterial Taxonomies
    Reza Mazloom, N. Tessa Pierce-Ward, Parul Sharma, Leighton Pritchard, C. Titus Brown, Boris A. Vinatzer, Lenwood S. Heath
    IEEE/ACM Transactions on Computational Biology and Bioinformatics.2024; 21(6): 2304.     CrossRef
  • Microbulbifer spongiae sp. nov., isolated from marine sponge Diacarnus erythraeanus
    Nabila Ishaq, Mimi Zhang, Luyao Gao, Micha Ilan, Zhiyong Li
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Genome‐based taxonomic analysis of the genus Pseudoalteromonas reveals heterotypic synonyms
    Patrick Videau, Maximillian D. Shlafstein, David K. Oline, Scott A. Givan, Linda Fleet Chapman, Wendy K. Strangman, Richard L. Hahnke, Jimmy H. Saw, Blake Ushijima
    Environmental Microbiology.2024;[Epub]     CrossRef
  • Arcicella gelida sp. nov. and Arcicella lustrica sp. nov., isolated from streams in China and re-examining the taxonomic status of all the genera within the families Spirosomataceae and Cytophagaceae
    Huibin Lu, Li Chen, Linpei Huang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Sustained bacterial N2O reduction at acidic pH
    Guang He, Gao Chen, Yongchao Xie, Cynthia M. Swift, Diana Ramirez, Gyuhyon Cha, Konstantinos T. Konstantinidis, Mark Radosevich, Frank E. Löffler
    Nature Communications.2024;[Epub]     CrossRef
  • Paenalcaligenes faecalis sp. nov., a novel species of the family Alcaligenaceae isolated from chicken faeces
    Yiran Zhang, John Quensen, Bo Chen, Hailong Li, James Tiedje, Wei Sun, Xun Qian
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Rhodoferax lithotrophicus sp. nov., a neutrophilic iron-oxidizing and -reducing bacterium isolated from iron-rich freshwater sediments
    Shingo Kato, Takashi Itoh, Takao Iino, Mitsuo Sakamoto, Moriya Ohkuma
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Paenibacillus suaedae sp. nov. and Paenibacillus violae sp. nov., isolated from the roots of Suaeda japonica Makino and Viola mandshurica W. Becker with plant growth-promoting potential
    Inhyup Kim, Sunho Park, Yonghee Jung, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Genetic potential for aerobic respiration and denitrification in globally distributed respiratory endosymbionts
    Daan R. Speth, Linus M. Zeller, Jon S. Graf, Will A. Overholt, Kirsten Küsel, Jana Milucka
    Nature Communications.2024;[Epub]     CrossRef
  • Description of the first marine-isolated member of the under-represented phylum Gemmatimonadota , and the environmental distribution and ecogenomics of Gaopeijiales ord. nov.
    Yu-Qi Ye, Meng-Qi Ye, Xin-Yue Zhang, You-Zhi Huang, Zi-Yang Zhou, Yan-Jun Feng, Zong-Jun Du, Thulani P. Makhalanyane
    mSystems.2024;[Epub]     CrossRef
  • Ideonella margarita sp. nov., Ideonella lacteola sp. nov., Pseudaquabacterium inlustre sp. nov. and Pseudaquabacterium rugosum sp. nov., isolated from streams in China and re-examining the taxonomic status of all the genera within the family
    Huibin Lu, Li Chen
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Comparative genomics of obligate predatory bacteria belonging to phylum Bdellovibrionota highlights distribution and predicted functions of lineage-specific protein families
    Sidney C. Davis, Joseph Cerra, Laura E. Williams, Barbara J. Campbell
    mSphere.2024;[Epub]     CrossRef
  • Isolation and characterization of cellulose-mineralizing haloalkaliphilic bacteria from Siberian soda lakes
    Dimitry Y. Sorokin, Alexander Y. Merkel, Tatjana V. Khizhniak
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • The genome of a new Halorubrum distributum strain ICIS4 isolated from the culture of a microalga Dunaliella salina
    Е. А. Selivanova, А. S. Balkin, Yu. А. Khlopko, V. Ya. Kataev, А. О. Plotnikov
    Microbiology.2024; 93(4): 444.     CrossRef
  • Lacrimispora brassicae sp. nov. isolated from fermented cabbage, and proposal of Clostridium indicum Gundawar et al. 2019 and Clostridium methoxybenzovorans Mechichi et al. 1999 as heterotypic synonyms of Lacrimispora amygdalina (Parshina et
    Hisami Kobayashi, Yasuhiro Tanizawa, Mitsuo Sakamoto, Moriya Ohkuma, Masanori Tohno
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Clostridium lapidicellarium sp. nov. and Clostridium moutaii sp. nov., two species isolated from fermentation cellar-producing sauce-flavour Chinese baijiu
    Fan Yang, Hui Wang, Liang-Qiang Chen, Nan Zhou, Jian-Jun Lu, Xiu-Xin Pu, Bo Wan, Li Wang, Shuang-Jiang Liu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Ultraconserved bacteriophage genome sequence identified in 1300-year-old human palaeofaeces
    Piotr Rozwalak, Jakub Barylski, Yasas Wijesekara, Bas E. Dutilh, Andrzej Zielezinski
    Nature Communications.2024;[Epub]     CrossRef
  • Description of Streptococcus dentalis sp. nov., Streptococcus gingivalis sp. nov., and Streptococcus lingualis sp. nov., Isolated from Human Oral Cavities
    Beom-Jin Goo, Young-Sik Choi, Do-Hun Gim, Su-Won Jeong, Jee-Won Choi, Hojun Sung, Jae-Yun Lee, Jin-Woo Bae
    Journal of Microbiology.2024; 62(11): 973.     CrossRef
  • Hohaiivirga grylli gen. nov., sp. nov., a New Member of the Family Methylobacteriaceae, Isolated from Cricket (Gryllus chinensis)
    Hong-Chuan Wang, Meng-Han Huang, Dan-Yuan Guo, Wei He, Lu Wang, Zi-Yue Fu, Wen-Jun Li, Ai Hua Zhang, Dao-Feng Zhang
    Current Microbiology.2024;[Epub]     CrossRef
  • Cellulomonas alba sp. nov. and Cellulomonas edaphi sp. nov., isolated from wetland soils
    Sunho Park, Inhyup Kim, Geeta Chhetri, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Age, metabolisms, and potential origin of dominant anammox bacteria in the global oxygen-deficient zones
    Rui Zhao, Irene H Zhang, Amal Jayakumar, Bess B Ward, Andrew R Babbin
    ISME Communications.2024;[Epub]     CrossRef
  • Limosilactobacillus allomucosae sp. nov., a novel species isolated from wild boar faecal samples as a potential probiotic for domestic pigs
    Binbin Chen, Shaktheeshwari Silvaraju, Sharifah Nora Ahmad Almunawar, Yu Chyuan Heng, Jolie Kar Yi Lee, Sandra Kittelmann
    Systematic and Applied Microbiology.2024; 47(6): 126556.     CrossRef
  • Evaluation of sequence-based tools to gather more insight into the positioning of rhizogenic agrobacteria within the Agrobacterium tumefaciens species complex
    Pablo Roberto Vargas Ribera, Nuri Kim, Marc Venbrux, Sergio Álvarez-Pérez, Hans Rediers, Muhammad Anwar
    PLOS ONE.2024; 19(11): e0302954.     CrossRef
  • Chitiniphilus purpureus sp. nov., a novel chitin-degrading bacterium isolated from crawfish pond sediment
    Kaiyang Li, Xiong Luo, Rongrong Fan, Zhuoran Ding, Shixue Zheng, Zhengjun Chen
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Thalassotalea aquiviva sp. nov., and Thalassotalea maritima sp. nov., Isolated from Seawater of the Coast in South Korea
    Jina Lee, Seung-Hui Song, Kira Moon, Nakyeong Lee, Sangdon Ryu, Hye Seon Song, Sung Moon Lee, Yun Ji Kim, Se Won Chun, Kyung-Min Choi, Aslan Hwanhwi Lee
    Journal of Microbiology.2024; 62(12): 1099.     CrossRef
  • Cold adaptation and response genes of Antarctic Cryobacterium sp. SO2 from the Fildes Peninsula, King George Island
    Chui Peng Teoh, Marcelo González‑Aravena, Paris Lavin, Clemente Michael Vui Ling Wong
    Polar Biology.2024; 47(2): 135.     CrossRef
  • Xiashengella succiniciproducens gen. nov., sp. nov., a succinate-producing bacterium isolated from an anaerobic digestion tank in the family Marinilabiliaceae of the order Bacteroidales
    Hao-Jie Huang, Xi Zhang, Xin-Wei Sun, Biao Chen, Xiu-Tong Li, Nan Zhou, Rashidin Abdugheni, Qiu-Yin Cheng, Tie-Jun Zhang, Yao Liu, Yong Jiang, Ye Deng, Shuang-Jiang Liu, Cheng-Ying Jiang
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Paracoccus spongiarum sp. nov., isolated from the marine sponge, Phakellia elegans
    Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Sorlinia euscelidii gen. nov., sp. nov., a novel acetic acid bacterium isolated from the leafhopper Euscelidius variegatus (Hemiptera: Cicadellidae)
    Ramona Marasco, Grégoire Michoud, Kholoud A. Seferji, Elena Gonella, Elisa Garuglieri, Eleonora Rolli, Alberto Alma, Francesca Mapelli, Sara Borin, Daniele Daffonchio, Elena Crotti
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Comparative genomics of the genus Halioglobus reveals the genetic basis for the reclassification of Halioglobus pacificus as Parahalioglobus pacificus gen. nov. comb. nov
    Jake Adolf V. Montecillo
    International Microbiology.2024; 27(6): 1831.     CrossRef
  • Neisseria leonii sp. nov., isolated from the nose, lung, and liver of rabbits
    Martin Boutroux, Sandrine Favre-Rochex, Olivier Gorgette, Gérald Touak, Estelle Mühle, Christiane Bouchier, Olivier Chesneau, Frédéric J. Veyrier, Dominique Clermont, Praveen Rahi
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Pedobacter rhodius sp. nov. and Pedobacter punctiformis sp. nov., isolated from soil
    Haejin Woo, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Yonghee Jung, Taegun Seo
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Taxonomic characterization of Sphaerotilus microaerophilus sp. nov., a sheath-forming microaerophilic bacterium of activated sludge origin
    Shiori Narihara, Shun Chida, Naoki Matsunaga, Ryosuke Akimoto, Mizuki Akimoto, Aoi Hagio, Tomomi Mori, Tadashi Nittami, Michio Sato, Sehui Mun, Hyeonjin Kang, Ji Hwan Back, Minoru Takeda
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Sphingomonas rustica sp. nov. and Sphingomonas agrestis sp. nov., novel carotenoid-producing bacterial species isolated from farm soil
    Hyunji Lee, Inhyup Kim, Sunho Park, Haejin Woo, Subin Yook, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Hidden genomic diversity drives niche partitioning in a cosmopolitan eukaryotic picophytoplankton
    Yangbing Xu, Shara K K Leung, Taylor M W Li, Charmaine C M Yung
    The ISME Journal.2024;[Epub]     CrossRef
  • Flagellimonas baculiformis sp. nov. and Flagellimonas crocea sp. nov., isolated from surface seawater of the Pacific Ocean
    Ming-lei Wang, Ge-Yi Fu, Xue-Wei Xu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Two Novel Bacterial Species, Rhodanobacter lycopersici sp. nov. and Rhodanobacter geophilus sp. nov., Isolated from the Rhizosphere of Solanum lycopersicum with Plant Growth-Promoting Traits
    Haejin Woo, Inhyup Kim, Geeta Chhetri, Sunho Park, Hyunji Lee, Subin Yook, Taegun Seo
    Microorganisms.2024; 12(11): 2227.     CrossRef
  • Preliminary comparative genomics analysis among Corynebacterium kroppenstedtii complex necessitates a reassessment of precise species associated with mastitis
    Ying Huang, Ming-Hui Song, Shun-Guang Li, Hong- Yu Shen, Ping-Hua Qu, Dao-Feng Zhang
    Journal of Applied Microbiology.2024;[Epub]     CrossRef
  • Salmonirosea aquatica gen. nov., sp. nov., a Novel Genus within the Family Spirosomaceae, Was Isolated from Brackish Water in the Republic of Korea
    Kiwoon Baek, Sumin Jang, Jaeduk Goh, Ahyoung Choi
    Microorganisms.2024; 12(8): 1671.     CrossRef
  • Phylogenomic analyses of the genus Actinoplanes: description of four novel genera
    Ivan Roman, Victor Fedorenko, Oleksandr Gromyko
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • A hotspot of diversity: novel Shewanella species isolated from Baltic Sea sediments delineate a sympatric species complex
    Alberto J. Martín-Rodríguez, Víctor Fernández-Juárez, Valerie D. Valeriano, Indiwari Mihindukulasooriya, Livia Ceresnova, Enrique Joffré, Susanne Jensie-Markopoulos, Edward R. B. Moore, Åsa Sjöling
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • An evolutionary view of the Fusarium core genome
    Daniel A. Gomez-Chavarria, Alvaro L. Rua-Giraldo, Juan F. Alzate
    BMC Genomics.2024;[Epub]     CrossRef
  • Complete genome sequence of a winter season Vibrio facilitates discovery of a novel subclade of cold-adapted species in the albus clade
    Paul D. Kastner, Stephen E. Noell, David A. Essig
    Microbial Genomics .2024;[Epub]     CrossRef
  • Advancements in prokaryotic systematics and the role of Bergey's International Society for Microbial Systematicsin addressing challenges in the meta-data era
    Jian-Yu Jiao, Rashidin Abdugheni, Dao-Feng Zhang, Iftikhar Ahmed, Mukhtiar Ali, Maria Chuvochina, Svetlana N Dedysh, Xiuzhu Dong, Markus Göker, Brian P Hedlund, Philip Hugenholtz, Kamlesh Jangid, Shuang-Jiang Liu, Edward R B Moore, Manik Prabhu Narsing Ra
    National Science Review.2024;[Epub]     CrossRef
  • Klebsiella Pneumoniae – Taxonomy, Occurrence, Identification, Virulence Factors and Pathogenicity
    Dorota Ochońska, Monika Brzychczy-Włoch
    Advancements of Microbiology.2024; 63(3): 157.     CrossRef
  • Characterization of a Novel Species of Legionella Isolated from a Healthcare Facility: Legionella resiliens sp. nov
    Sandra Cristino, Maria Rosaria Pascale, Federica Marino, Carlo Derelitto, Silvano Salaris, Massimiliano Orsini, Stefano Squarzoni, Antonella Grottola, Luna Girolamini
    Pathogens.2024; 13(3): 250.     CrossRef
  • Genome-based classification of Halobellus rubicundus sp. nov., a novel extremely halophilic archaeon isolated from a Korean solar saltern
    Chi Young Hwang, Eui-Sang Cho, In-Tae Cha, Ki-Eun Lee, Eun-Young Lee, Myung-Ji Seo
    Extremophiles.2024;[Epub]     CrossRef
  • Reclassification of Aestuariicella albida as Pseudomaricurvus albidus comb. nov. and Aestuariicella hydrocarbonica as Pseudomaricurvus hydrocarbonicus comb. nov. Based on Comparative Genomics and Molecular Synapomorphies
    Jake Adolf V. Montecillo, Merell P. Billacura, Maria Distressa G. Billacura
    Current Microbiology.2024;[Epub]     CrossRef
  • Schauerella fraxinea gen. nov., sp. nov., a bacterial species that colonises ash trees tolerant to dieback caused by Hymenoscyphus fraxineus
    Undine Behrendt, Valentin Burghard, Sonja Wende, Kristina Ulrich, Jacqueline Wolf, Meina Neumann-Schaal, Andreas Ulrich
    Systematic and Applied Microbiology.2024; 47(4): 126516.     CrossRef
  • Roseateles subflavus sp. nov. and Roseateles aquae sp. nov., isolated from artificial pond water and Roseateles violae sp. nov., isolated from a Viola mandshurica root
    Haejin Woo, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Yonghee Jung, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • New Drinking Water Genome Catalog Identifies a Globally Distributed Bacterial Genus Adapted to Disinfected Drinking Water Systems
    Ashwin S Sudarshan, Zihan Dai, Marco Gabrielli, Solize Oosthuizen-Vosloo, Konstantinos T. Konstantinidis, Ameet J Pinto
    Environmental Science & Technology.2024; 58(37): 16475.     CrossRef
  • Phylogenomic evaluation of Mangrovimicrobium sediminis gen. nov. sp. nov., the first nitrogen fixing member of the family Halieaceae adapted to mangrove habitat and reclassification of Halioglobus pacificus to Pseudohaliglobus pacificus comb. nov.
    Pravin Kumar, Ashish Verma, Pooja Yadav, Joyasree Das, Lalit Kumar, Srinivasan Krishnamurthi
    Science of The Total Environment.2024; 933: 172995.     CrossRef
  • Draft Genome Sequences of Three Janthinobacterium lividum Strains Producing Violacein
    Yu Jeong Lee, Jae-Cheol Lee, Kira Moon, Aslan Hwanhwi Lee, Byung Hee Chun
    Microbiology and Biotechnology Letters.2024; 52(2): 215.     CrossRef
  • Eubacterium album sp. nov., a butyrate-producing bacterium isolated from faeces of a healthy human
    Feng-Lan Liu, Rashidin Abdugheni, Cong-Guo Ran, Nan Zhou, Shuang-Jiang Liu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Description of Asgardarchaeum abyssi gen. nov. spec. nov., a novel species within the class Asgardarchaeia and phylum Asgardarchaeota in accordance with the SeqCode
    Daniel Tamarit, Stephan Köstlbacher, Kathryn E. Appler, Kassiani Panagiotou, Valerie De Anda, Christian Rinke, Brett J. Baker, Thijs J.G. Ettema
    Systematic and Applied Microbiology.2024; 47(4): 126525.     CrossRef
  • Alterisphingorhabdus coralli gen. nov. sp. nov., a novel aerobic anoxygenic phototrophic bacteria isolated from reef-building coral
    Chang Yan, Kun Zhang, Songbiao Shi, Lili Jian, Beilin Chen, Syed Raziuddin Quadri, Xinpeng Tian
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Update on the proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
    Raúl Riesco, Martha E. Trujillo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Polymorphospora lycopeni sp. nov., a lycopene-producing actinomycetes isolated from lakeside soil sample of Baiyangdian
    Jiashan Liu, Shilong Li, Xiaomin Duan, Hongmei Li, Xiumin Zhang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Reclassification of Butyrivibrio crossotus Moore et al. 1976 (Approved Lists 1980) into a novel genus as Eshraghiella crossota gen. nov., comb. nov.
    Mehdi Fatahi-Bafghi
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Analysis of the genetic diversity in RNA-directed RNA polymerase sequences: implications for an automated RNA virus classification system
    Zhongshuai Tian, Tao Hu, Edward C Holmes, Jingkai Ji, Weifeng Shi
    Virus Evolution.2024;[Epub]     CrossRef
  • Fodinisporobacter ferrooxydans gen. nov., sp. nov.—A Spore-Forming Ferrous-Oxidizing Bacterium Isolated from a Polymetallic Mine
    Zhen Jiang, Xiutong Li, Zonglin Liang, Zebao Tan, Nan Zhou, Ying Liu, Zhenghua Liu, Huaqun Yin, Kun Luo, Supawadee Ingsriswang, Shuangjiang Liu, Chengying Jiang
    Microorganisms.2024; 12(5): 853.     CrossRef
  • An abundant bacterial phylum with nitrite-oxidizing potential in oligotrophic marine sediments
    Rui Zhao, Steffen L. Jørgensen, Andrew R. Babbin
    Communications Biology.2024;[Epub]     CrossRef
  • Genomic and phenotypic characterization of 26 novel marine bacterial strains with relevant biogeochemical roles and widespread presence across the global ocean
    Xavier Rey-Velasco, Teresa Lucena, Ana Belda, Josep M. Gasol, Olga Sánchez, David R. Arahal, María J. Pujalte
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Ignisphaera cupida sp. nov., a hyperthermophilic hydrolytic archaeon from a hot spring of Uzon (Kamchatka), and emended description of the genus Ignisphaera
    Olga A. Podosokorskaya, Alexander G. Elcheninov, Alexandra A. Klyukina, Alexander Y. Merkel
    Systematic and Applied Microbiology.2024; 47(5): 126541.     CrossRef
  • Genomic diversity in Paenibacillus polymyxa: unveiling distinct species groups and functional variability
    Adrian Wallner, Livio Antonielli, Ouiza Mesguida, Patrice Rey, Stéphane Compant
    BMC Genomics.2024;[Epub]     CrossRef
  • Comparative genomic analyses of Cutibacterium granulosum provide insights into genomic diversity
    Peishan Chen, Shaojing Wang, Hongyan Li, Xiaoye Qi, Yuanyuan Hou, Ting Ma
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • A new insight on the xyl upper operon revealed through genomic investigation strategy
    Xuefeng Tian, Shaojing Wang, Peishan Chen, Mingbo Yang, Zhaoying Su, Yue Ming, Guoqiang Li, Ting Ma
    International Biodeterioration & Biodegradation.2024; 189: 105748.     CrossRef
  • Genome-based reclassification of Spiroplasma atrichopogonis Koerber et al. 2005 as a later heterotypic synonym of Spiroplasma mirum Tully et al. 1982
    Vatsal Bhargava, Darshana Lahon, Sonal Gupta, Jasvinder Kaur, Pushp Lata
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Lysinibacillus piscis sp. nov. isolated from the gut of mottled spinefoot Siganus fuscescens
    Hiyu Kanbe, Yuki Sano, Kazumori Mise, Shusei Kanie, Natsumi Ushijima, Keisuke Kawano, Minoru Kihara, Hideomi Itoh
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Specific amino acid changes correlate with pathogenic flavobacteria
    Vincent Gélinas, Valérie E. Paquet, Maude F. Paquet, Steve J. Charette, Antony T. Vincent
    Genome.2024; 67(10): 368.     CrossRef
  • Aurantiacibacter flavus sp. nov. and Aurantiacibacter gilvus sp. nov., isolated from the mudflat of Suaeda japonica colonies
    Sunho Park, Inhyup Kim, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Splendidivirga corallicola gen. nov., sp. nov. and Agaribacillus aureus gen. nov., sp. nov., two bacteria isolated from coral Porites lutea, and proposal of Splendidivirgaceae fam. nov.
    Jin Li, Jixin Luo, Mi Li, Chenyan Wang, Siyu Hu, Kun Lu, Guanghua Wang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • The Genome of a New Halorubrum distributum Strain ICIS4 Isolated from the Culture of a Microalga Dunaliella salina
    E. A. Selivanova, A. S. Balkin, Yu. A. Khlopko, V. Ya. Kataev, A. O. Plotnikov
    Microbiology.2024; 93(4): 482.     CrossRef
  • Peteryoungia algae sp. nov. isolated from seaweeds of Gouqi Island, China, and its unique genetic features among Peteryoungia strains
    Jun Yin, Min He, Xiao-Xiao Liu, Chang-Bin Ren, Hou-Hong Liu, Hai Luo, Gen Chen, Ze-Fei Wang, Sanjit Chandra Debnath, Pin-Mei Wang, Hai-Xin Chen, Dao-Qiong Zheng
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Methylomonas rivi sp. nov., Methylomonas rosea sp. nov., Methylomonas aurea sp. nov. and Methylomonas subterranea sp. nov., type I methane-oxidizing bacteria isolated from a freshwater creek and the deep terrestrial subsurface
    Christopher A. Abin, Christopher T. Garner, Krithivasan Sankaranarayanan, Reid A. Sindelar, Kyrah F. Kotary, Rosa M. Garner, Samantha C. Barclay, Haiyuan Cai, Paul A. Lawson, Lee R. Krumholz
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Phylogenomic discernments into Anaerolineaceae thermal adaptations and the proposal of a candidate genus Mesolinea
    Katherine Bedoya-Urrego, Juan F. Alzate
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Unraveling the genomic secrets of Tritonibacter mobilis AK171: a plant growth-promoting bacterium isolated from Avicennia marina
    Amal Khalaf Alghamdi, Sabiha Parween, Heribert Hirt, Maged M. Saad
    BMC Genomics.2024;[Epub]     CrossRef
  • Ochrobactrum chromiisoli sp. nov., Isolated from Chromium-Contaminated Soil
    Yi Yang, Zhe Xu, Li Yang, Meng-yao Hu, Guang-yang Jiang, Jia Chen, Yi-chen Yang, Yongqiang Tian
    Current Microbiology.2024;[Epub]     CrossRef
  • Spartinivicinus poritis sp. nov., a red pigment-producing bacterium isolated from a scleractinian coral Porites lutea
    Sumbal Sajid, Guoqiang Zhang, Zongyao Zhang, Yishan Lu, Lianguo Chen, Lin Cai
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Tardiphaga alba sp. nov., a heavy-metal-tolerant bacterium isolated from garden soil
    Zhihua Bao, Chaojun Wang, Jiahui Cao, Tingting Zhang, Yong Guo, Yoshinori Sato, Tomoyasu Nishizawa, Hiroyuki Ohta
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Novel order-level lineage of ammonia-oxidizing archaea widespread in marine and terrestrial environments
    Yue Zheng, Baozhan Wang, Ping Gao, Yiyan Yang, Bu Xu, Xiaoquan Su, Daliang Ning, Qing Tao, Qian Li, Feng Zhao, Dazhi Wang, Yao Zhang, Meng Li, Mari-K H Winkler, Anitra E Ingalls, Jizhong Zhou, Chuanlun Zhang, David A Stahl, Jiandong Jiang, Willm Martens-H
    The ISME Journal.2024;[Epub]     CrossRef
  • Refining the taxonomy of the order Hyphomicrobiales (Rhizobiales) based on whole genome comparisons of over 130 type strains
    George C. diCenzo, Yuqi Yang, J. Peter W. Young, Nemanja Kuzmanović
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Luteimonas flava sp. nov. and Aquilutibacter rugosus gen. nov., sp. nov., isolated from freshwater environments in China and re-examining the taxonomic status of genera Luteimonas and Lysobacter
    Huibin Lu, Li Chen, Yujing Wang, Peng Xing, Qinglong Wu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Novel taxonomic and functional diversity of eight bacteria from the upper digestive tract of chicken
    Bibiana Rios-Galicia, Johan S. Sáenz, Timur Yergaliyev, Christoph Roth, Amélia Camarinha-Silva, Jana Seifert
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Parendozoicomonas callyspongiae sp. nov. Isolated from a Marine Sponge, Callyspongia elongate, and Reclassification of Sansalvadorimonas verongulae as Parendozoicomonas verongulae comb. nov.
    Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
    Current Microbiology.2024;[Epub]     CrossRef
  • Novel phage infecting the Roseobacter CHUG lineage reveals a diverse and globally distributed phage family
    Zuqing Wu, Luyuan Guo, Ying Wu, Mingyu Yang, Sen Du, Jiabing Shao, Zefeng Zhang, Yanlin Zhao, Michael J. Imperiale
    mSphere.2024;[Epub]     CrossRef
  • Biochip-Based Identification of Mycobacterial Species in Russia
    Danila Zimenkov, Vyacheslav Zhuravlev, Anastasia Ushtanit, Marina Filippova, Uliana Semenova, Natalia Solovieva, Maria Sviridenko, Anastasia Khakhalina, Svetlana Safonova, Marina Makarova, Elizaveta Gordeeva, Elena Guselnikova, Yakov Schwartz, Natalia Sta
    International Journal of Molecular Sciences.2024; 25(23): 13200.     CrossRef
  • Leptothrix ochracea genomes reveal potential for mixotrophic growth on Fe(II) and organic carbon
    Gracee K. Tothero, Rene L. Hoover, Ibrahim F. Farag, Daniel I. Kaplan, Pamela Weisenhorn, David Emerson, Clara S. Chan, Arpita Bose
    Applied and Environmental Microbiology.2024;[Epub]     CrossRef
  • Svornostia abyssi gen. nov., sp. nov. isolated from the world’s deepest silver–uranium mine currently devoted to the extraction of radon-saturated water
    Gabriela Kapinusova, Jachym Suman, Michal Strejcek, Petr Pajer, Tomas Cajthaml, Pavel Ulbrich, Meina Neumann-Schaal, Ondrej Uhlik
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Genomic analysis of the class Phycisphaerae reveals a versatile group of complex carbon-degrading bacteria
    Wouter B. Lenferink, Theo A. van Alen, Mike S. M. Jetten, Huub J. M. Op den Camp, Maartje A. H. J. van Kessel, Sebastian Lücker
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Genome streamlining in Parcubacteria transitioning from soil to groundwater
    Narendrakumar M. Chaudhari, Olga M. Pérez-Carrascal, Will A. Overholt, Kai U. Totsche, Kirsten Küsel
    Environmental Microbiome.2024;[Epub]     CrossRef
  • Sulfurospirillum diekertiae sp. nov., a tetrachloroethene-respiring bacterium isolated from contaminated soil
    Huijuan Jin, Leitao Huo, Yi Yang, Yan Lv, Jingjing Wang, Julien Maillard, Christof Holliger, Frank E. Löffler, Jun Yan
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Description of Pseudocalidococcus azoricus gen. sp. nov. (Thermosynechococcaceae, Cyanobacteria), a Rare but Widely Distributed Coccoid Cyanobacteria
    Rúben Luz, Rita Cordeiro, Jan Kaštovský, Amélia Fonseca, Ralph Urbatzka, Vitor Vasconcelos, Vítor Gonçalves
    Diversity.2023; 15(12): 1157.     CrossRef
  • The identification of the new species Nitratireductor thuwali sp. nov. reveals the untapped diversity of hydrocarbon-degrading culturable bacteria from the arid mangrove sediments of the Red Sea
    Ramona Marasco, Grégoire Michoud, Fatmah O. Sefrji, Marco Fusi, Chakkiath P. Antony, Kholoud A. Seferji, Alan Barozzi, Giuseppe Merlino, Daniele Daffonchio
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Danxiaibacter flavus gen. nov., sp. nov., a novel bacterium of the family Chitinophagaceae isolated from forest soil on Danxia Mountain
    Zhuo-Huan Zheng, Chun-Yan Lu, Wen-Hui Lian, Jia-Rui Han, Fang Chen, Ting Zhou, Shuai Li, Lei Dong, Wen-Jun Li
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Metabolic profiling of petroleum-degrading microbial communities incubated under high-pressure conditions
    Jinbo Xu, Lu Wang, Weifeng Lv, Xinmin Song, Yong Nie, Xiao-Lei Wu
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Comparative Genomics Reveal the High Conservation and Scarce Distribution of Nitrogen Fixation nif Genes in the Plant-Associated Genus Herbaspirillum
    Ana Marina Pedrolo, Filipe Pereira Matteoli, Cláudio Roberto Fônseca Sousa Soares, Ana Carolina Maisonnave Arisi
    Microbial Ecology.2023; 86(1): 563.     CrossRef
  • UACG: Up-to-Date Archaeal Core Genes and Software for Phylogenomic Tree Reconstruction
    Seong-In Na, Michael James Bailey, Mauricio Chalita, Jae Hyoung Cho, Jongsik Chun
    Journal of Microbiology.2023; 61(7): 683.     CrossRef
  • Alkalicoccobacillus porphyridii sp. nov., isolated from a marine red alga, reclassification of Shouchella plakortidis and Shouchella gibsonii as Alkalicoccobacillus plakortidis comb. nov. and Alkalicoccobacillus gibsonii comb. nov., and emend
    Kyung Hyun Kim, Dong Min Han, Jae Kyeong Lee, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Phocaeicola oris sp. nov., an anaerobic bacterium isolated from the saliva of a patient with oral squamous cell carcinoma
    Jiung-Wen Chen, Chao-Jen Shih, Li-Wha Wu, Yen-Chi Wu, Wei-Fan Chiang, Yuh-Ling Chen, Jer-Horng Wu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Methylacidiphilum caldifontis gen. nov., sp. nov., a thermoacidophilic methane-oxidizing bacterium from an acidic geothermal environment, and descriptions of the family Methylacidiphilaceae fam. nov. and order Methylacidiphilales ord. nov.
    Samuel Imisi Awala, Joo-Han Gwak, Yongman Kim, Chanmee Seo, Andrea Strazzulli, Song-Gun Kim, Sung-Keun Rhee
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Genome-based classification of the class Halobacteria and description of Haladaptataceae fam. nov. and Halorubellaceae fam. nov
    Can Cui, Dong Han, Jing Hou, Heng-Lin Cui
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Complete genome sequence analysis of plant growth-promoting bacterium, Isoptericola sp. AK164 isolated from the rhizosphere of Avicennia marina growing at the Red Sea coast
    Amal Khalaf Alghamdi, Sabiha Parween, Heribert Hirt, Maged M. Saad
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Draft genome sequence of Hahella sp. CR1 and its ability in producing cellulases for saccharifying agricultural biomass
    Melvin Chun Yun Tan, Muhammad Ramziuddin Zakaria, Kok Jun Liew, Chun Shiong Chong
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Sedimenticola hydrogenitrophicus sp. nov. a chemolithoautotrophic bacterium isolated from a terrestrial mud volcano, and proposal of Sedimenticolaceae fam. nov. in the order Chromatiales
    Galina Slobodkina, Alexander Merkel, Nataliya Ratnikova, Alexandra Kuchierskaya, Alexander Slobodkin
    Systematic and Applied Microbiology.2023; 46(5): 126451.     CrossRef
  • Comparative genomic assessment of members of genus Tenacibaculum: an exploratory study
    Rohit Satyam, Shaban Ahmad, Khalid Raza
    Molecular Genetics and Genomics.2023; 298(5): 979.     CrossRef
  • Cave Thiovulum (Candidatus Thiovulum stygium) differs metabolically and genomically from marine species
    Mina Bizic, Traian Brad, Danny Ionescu, Lucian Barbu-Tudoran, Luca Zoccarato, Joost W Aerts, Paul-Emile Contarini, Olivier Gros, Jean-Marie Volland, Radu Popa, Jessica Ody, Daniel Vellone, Jean-François Flot, Scott Tighe, Serban M Sarbu
    The ISME Journal.2023; 17(3): 340.     CrossRef
  • Solicola gregarius gen. nov., sp. nov., a soil actinobacterium isolated after enhanced cultivation with Micrococcus luteus culture supernatant
    Marco A. Lopez Marin, Jachym Suman, Kunal Jani, Pavel Ulbrich, Tomas Cajthaml, Alena Filipova, Petr Pajer, Meina Neumann-Schaal, Michal Strejcek, Ondrej Uhlik
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Microbial Niche Differentiation during Nitrite-Dependent Anaerobic Methane Oxidation
    Wen-Bo Nie, Guo-Jun Xie, Xin Tan, Jie Ding, Yang Lu, Yi Chen, Chun Yang, Qiang He, Bing-Feng Liu, Defeng Xing, Nanqi Ren
    Environmental Science & Technology.2023; 57(17): 7029.     CrossRef
  • Allocoprobacillus halotolerans gen. nov., sp. nov and Coprobacter tertius sp. nov., isolated from human gut microbiota
    Nancy M. Y. Teng, Raymond Kiu, Rhiannon Evans, David J. Baker, Christian Zenner, Stephen D. Robinson, Lindsay J. Hall
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Aridibaculum aurantiacum gen. nov., sp. nov., isolated from the Kumtag Desert soil
    Lei Dong, Shuai Li, Guo-Yuan Shi, Jia-Rui Han, Chun-Yan Lu, Wen-Hui Lian, Ling-Xiang Yue, Dalal Hussien M. Alkhalifah, Wael N. Hozzein, Wen-Jun Li
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Acidaminococcus homini s sp. nov., Amedibacillus hominis sp. nov., Lientehia hominis gen. nov. sp. nov., Merdimmobilis hominis gen. nov. sp. nov., and Paraeggerthella hominis sp. nov., isolated from human faeces
    Rashidin Abdugheni, Dan-Hua Li, Yu-Jing Wang, Meng-Xuan Du, Nan Zhou, Chang Liu, Shuang-Jiang Liu
    International Journal of Systematic and Evolutionary Microbiology.2023;[Epub]     CrossRef
  • Vogesella aquatica sp. nov. and Vogesella margarita sp. nov., isolated from rivers in Southwest China
    Huibin Lu, Li Chen, Lingyang Kong, Linpei Huang, Guangjie Chen
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Dermatobacter hominis gen. nov., sp. nov., a new member of the family Iamiaceae, revealed the potential utilisation of skin-derived metabolites
    HyungWoo Jo, Chaeyun Baek, Young Mok Heo, Hye-Been Kim, Haeun Lee, Seunghyun Kang, Seyoung Mun, Yunseok Oh, Doyeong Ko, Kyudong Han, Raúl Riesco, Martha E. Trujillo, Dong-Geol Lee
    Antonie van Leeuwenhoek.2023; 116(11): 1139.     CrossRef
  • Dynamic Development of Viral and Bacterial Diversity during Grass Silage Preservation
    Johan S. Sáenz, Bibiana Rios-Galicia, Bianca Rehkugler, Jana Seifert
    Viruses.2023; 15(4): 951.     CrossRef
  • Alteromonas gilva sp. nov. and Erythrobacter fulvus sp. nov., isolated from a tidal mudflat
    Sunho Park, Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Two novel alkalitolerant species Pseudalkalibacillus spartinae sp. nov. and Pseudalkalibacillus sedimenti sp. nov.
    Guo-Hong Liu, Shuang Han, Bing Li, Rui-Li Li, Huai Shi, Qian-Qian Chen, Hend A. Alwathnani, Christopher Rensing, Shun-Gui Zhou
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Description of Brachybacterium sillae sp. nov., a thermophilic bacterium isolated from a hot spring
    Dariimaa Ganbat, DoKyung Oh, Yong-Jik Lee, Dong-Woo Lee, Seong-Bo Kim, Won-Jae Chi, Ki-Eun Lee, Byoung-Hee Lee, You-Jung Jung, Jung-Sook Lee, Sang-Jae Lee
    Antonie van Leeuwenhoek.2023; 116(8): 791.     CrossRef
  • Bacillus mexicanus sp. nov., a biological control bacterium isolated from the common bean (Phaseolus vulgaris L.) crop in Sinaloa, Mexico
    Sergio de los Santos Villalobos, Carmen María Félix Pablos, Valeria Valenzuela Ruiz, Fannie I. Parra Cota
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Genome-centric metagenomic insights into the role of Chloroflexi in anammox, activated sludge and methanogenic reactors
    Patricia Bovio-Winkler, Leandro D. Guerrero, Leonardo Erijman, Pía Oyarzúa, María Eugenia Suárez-Ojeda, Angela Cabezas, Claudia Etchebehere
    BMC Microbiology.2023;[Epub]     CrossRef
  • Potential for homoacetogenesis via the Wood–Ljungdahl pathway in Korarchaeia lineages from marine hydrothermal vents
    Francesca Vulcano, Petra Hribovšek, Emily Olesin Denny, Ida H. Steen, Runar Stokke
    Environmental Microbiology Reports.2023; 15(6): 698.     CrossRef
  • Isolation and characterisation of novel Methanocorpusculum species indicates the genus is ancestrally host-associated
    James G. Volmer, Rochelle M. Soo, Paul N. Evans, Emily C. Hoedt, Ana L. Astorga Alsina, Benjamin J. Woodcroft, Gene W. Tyson, Philip Hugenholtz, Mark Morrison
    BMC Biology.2023;[Epub]     CrossRef
  • Thermomonas mangrovi sp. nov., isolated from soil of a mangrove nature reserve
    Shanshan Xu, Junpeng Chen, Si Chen, Qiliang Lai, Zengzhi Liu, Ying Xu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Proposal to transfer Bacillus massiliigorillae to the genus Peribacillus as Peribacillus massiliigorillae comb. nov., and Bacillus sinesaloumensis to the genus Ferdinandcohnia as Ferdinandcohnia sinesaloumensis comb. nov
    Awalagaway Dhulappa, Manik Prabhu Narsing Rao, Haijie Wang, Bhagwan Narayan Rekadwad, Ying-Qian Kang
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Characterization and Antioxidant Activity of Exopolysaccharides Produced by Lysobacter soyae sp. nov Isolated from the Root of Glycine max L.
    Inhyup Kim, Geeta Chhetri, Yoonseop So, Sunho Park, Yonghee Jung, Haejin Woo, Taegun Seo
    Microorganisms.2023; 11(8): 1900.     CrossRef
  • Leucobacter edaphi sp. nov., a highly chromate-tolerant bacterium isolated from chromium containing chemical plant soil
    Bijun Zheng, Zhe Xu, Li Yang, Guangyang Jiang, Jia Chen, Yichen Yang, Yongqiang Tian
    Antonie van Leeuwenhoek.2023; 116(12): 1433.     CrossRef
  • Roseateles albus sp. nov., Roseateles koreensis sp. nov. and Janthinobacterium fluminis sp. nov., isolated from freshwater at Jucheon River, and emended description of Roseateles aquaticus comb. nov.
    Sunho Park, Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Isolation and Genomic Analysis of 3-Chlorobenzoate-Degrading Bacteria from Soil
    Ifat Ara, Ryota Moriuchi, Hideo Dohra, Kazuhide Kimbara, Naoto Ogawa, Masaki Shintani
    Microorganisms.2023; 11(7): 1684.     CrossRef
  • Brytella acorum gen. nov., sp. nov., a novel acetic acid bacterium from sour beverages
    Atena Sadat Sombolestani, Dries Bongaerts, Eliza Depoorter, Ilse Cleenwerck, Anneleen D. Wieme, Scott J. Britton, Stefan Weckx, Luc De Vuyst, Peter Vandamme
    Systematic and Applied Microbiology.2023; 46(5): 126440.     CrossRef
  • Complete genome sequence of Vibrio gazogenes PB1: an estuarine bacterium capable of producing prodigiosin from starch or cellulose
    Bincy Baby, Dhanya Vijay, Pretty S. Philip, Afra A. Alnuaimi, Hessa M. Almansoori, Sarah O. Areidat, Gulfaraz Khan, Ranjit Vijayan, M. Kalim Akhtar
    Frontiers in Marine Science.2023;[Epub]     CrossRef
  • Tianweitania aestuarii sp. nov., isolated from a coastal dune, reclassification of Corticibacterium populi as Tianweitania populi comb. nov., and emended description of the genus Tianweitania
    Ji Hyeon Song, Sooyeon Park, Jung-Sook Lee, Wonyong Kim, Jung-Hoon Yoon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Fluviispira vulneris sp. nov., isolated from human wound secretions
    Peijuan Tang, Na Peng, Pengwen Ouyang, Sheng Long, Zhenhua Wei, Xingchun Chen, Pinghua Qu, Liangyi Xie
    Antonie van Leeuwenhoek.2023; 116(12): 1305.     CrossRef
  • Neorhizobium turbinariae sp. nov., a coral-beneficial bacterium isolated from Turbinaria peltata
    Hao Sun, Zhiyuan Miao, Shuai Liu, Xuerui Liu, Bogui Chen, Baolin Liao, Baohua Xiao
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Description of Salinimicrobium tongyeongense sp. nov., isolated from seawater
    Dariimaa Ganbat, Dong-Woo Lee, Seong-Bo Kim, Yong-Jik Lee, Gaewon Nam, Won-Jae Chi, Byoung-Hee Lee, You-Jung Jung, Jung-Sook Lee, Sang-Jae Lee
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Genomic analysis and characterization of phages infecting the marine Roseobacter CHAB-I-5 lineage reveal a globally distributed and abundant phage genus
    Zefeng Zhang, Zuqing Wu, He Liu, Mingyu Yang, Rui Wang, Yanlin Zhao, Feng Chen
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • PhaGAA: an integrated web server platform for phage genome annotation and analysis
    Jiawei Wu, Qingrui Liu, Min Li, Jiliang Xu, Chen Wang, Junyin Zhang, Minfeng Xiao, Yannan Bin, Junfeng Xia, Can Alkan
    Bioinformatics.2023;[Epub]     CrossRef
  • Comparative Genomics Reveals Three Genetic Groups of the Whitefly Obligate Endosymbiont Candidatus Portiera aleyrodidarum
    Teng Lei, Ning Luo, Chao Song, Junwei Yu, Yuhang Zhou, Xin Qi, Yinquan Liu
    Insects.2023; 14(11): 888.     CrossRef
  • Roseobacter insulae sp. nov. and Loktanella gaetbuli sp. nov., isolated from tidal flats in the Yellow Sea in Korea
    Eun Bee Lee, Sooyeon Park, Wonyong Kim, Jung-Hoon Yoon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Novosphingobium mangrovi sp. nov., isolated from mangrove sediment
    Qian Huang, Zhihui Qian, Tao Peng, Jin Li, Xueying Ye, Tongwang Huang, Zhong Hu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Phylotaxonomic assessment based on four core gene sets and proposal of a genus definition among the families Paracoccaceae and Roseobacteraceae
    Dao-Feng Zhang, Wei He, Zongze Shao, Iftikhar Ahmed, Yuqin Zhang, Wen-Jun Li, Zhe Zhao
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Scleromatobacter humisilvae gen. nov., sp. nov., a novel bacterium isolated from oak forest soil
    Sophie Mieszkin, Blandine Trouche, Julien Ancousture, Youssef Raouf, Stéphane Uroz, Karine Alain
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Comammox Nitrospira and Ammonia-Oxidizing Archaea Are Dominant Ammonia Oxidizers in Sediments of an Acid Mine Lake Containing High Ammonium Concentrations
    Deyong Li, Zhichang Ren, Yangqi Zhou, Lugao Jiang, Min Zheng, Guoqiang Liu, Jennifer B. Glass
    Applied and Environmental Microbiology.2023;[Epub]     CrossRef
  • Citrobacter sp. Y3 harbouring novel gene HBCD-hd-1 mineralizes hexabromocyclododecane via new metabolic pathways according to multi-omics characterization
    Xingxing Peng, Tianyu Li, Qihang Zheng, Yingyuan Lu, Yuzhe He, Yetao Tang, Rongliang Qiu
    Journal of Hazardous Materials.2023; 442: 130071.     CrossRef
  • Opacimonas viscosa gen. nov., sp. nov., a novel bacterium isolated from phycosphere
    Xuanru Lin, Runlin Cai, Guanjing Cai, Jianmin Xie, Zhenyuan Zhou, Hui Wang
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Description of Microbacterium neungamense sp. nov. isolated from a hot spring
    Dariimaa Ganbat, Ga Eul Jeong, DoKyung Oh, Dong-Woo Lee, Yong-Jik Lee, Seong-Bo Kim, In-Tae Cha, Won-Jae Chi, Seul-Ki Park, Jung-Sook Lee, Sang-Jae Lee
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Habitat distribution of the genus Belliella in continental waters and the description of Belliella alkalica sp. nov., Belliella calami sp. nov. and Belliella filtrata sp. nov.
    Kristóf Korponai, Sára Szuróczki, Zsuzsanna Márton, Attila Szabó, Paula V. Morais, Diogo Neves Proença, Erika Tóth, Emil Boros, Károly Márialigeti, Tamás Felföldi
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Molecular Characterization of Indigenous Rhizobia from Kenyan Soils Nodulating with Common Beans
    Clabe Wekesa, Kelvin Kiprotich, Patrick Okoth, George O. Asudi, John O. Muoma, Alexandra C. U. Furch, Ralf Oelmüller
    International Journal of Molecular Sciences.2023; 24(11): 9509.     CrossRef
  • Putative novel hydrogen- and iron-oxidizing sheath-producing Zetaproteobacteria thrive at the Fåvne deep-sea hydrothermal vent field
    Petra Hribovšek, Emily Olesin Denny, Håkon Dahle, Achim Mall, Thomas Øfstegaard Viflot, Chanakan Boonnawa, Eoghan P. Reeves, Ida Helene Steen, Runar Stokke, Michael S. Rappe
    mSystems.2023;[Epub]     CrossRef
  • Thiovibrio frasassiensis gen. nov., sp. nov., an autotrophic, elemental sulphur disproportionating bacterium isolated from sulphidic karst sediment, and proposal of Thiovibrionaceae fam. nov.
    Heidi S. Aronson, Cais Thomas, Maia K. Bhattacharyya, Shaan R. Eckstein, Sophia R. Jensen, Roman A. Barco, Jennifer L. Macalady, Jan P. Amend
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Hufsiella ginkgonis gen. nov., sp. nov. and Hufsiella arboris sp. nov., isolated from tree barks
    Heeyoung Kang, Seokhyeon Bae, Haneul Kim, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Phenotypic and genomic characterization of the first alkaliphilic aceticlastic methanogens and proposal of a novel genus Methanocrinis gen.nov. within the family Methanotrichaceae
    Maria A. Khomyakova, Alexander Y. Merkel, Alexander I. Slobodkin, Dimitry Y. Sorokin
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Description of Xanthocytophaga agilis sp. nov. and Xanthocytophaga flavus sp. nov. of the new genus Xanthocytophaga gen. nov and the proposal of Rhodocytophagaceae fam. nov. within the order Cytophagales
    Xianjiao Zhang, Guang-Da Feng, Yang Liu, Fan Yang, Yanxuan Li, Xiaoqin Deng, Honghui Zhu, Qing Yao
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Draft genome sequence of Joostella atrarenae M1-2T with cellulolytic and hemicellulolytic ability
    Kok Jun Liew, Muhammad Ramziuddin Zakaria, Clarine Wan Ling Hong, Melvin Chun Yun Tan, Chun Shiong Chong
    3 Biotech.2023;[Epub]     CrossRef
  • Transcriptional Landscapes of Herelleviridae Bacteriophages and Staphylococcus aureus during Phage Infection: An Overview
    Maria Kornienko, Dmitry Bespiatykh, Roman Gorodnichev, Narina Abdraimova, Egor Shitikov
    Viruses.2023; 15(7): 1427.     CrossRef
  • Tenacibaculum tangerinum sp. nov., isolated from a tidal flat sediment
    Sang Hyun Lee, Yeonjae Yoo, Dae Young Kwon, Jong Seong Khim, Xiaoyue Xu, Bogun Kim, In-Geol Choi, Jae-Jin Kim
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Mesonia aestuariivivens sp. nov., isolated from a tidal flat
    Sooyeon Park, Jung-Sook Lee, Wonyong Kim, Jung-Hoon Yoon
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Metabacillus rhizolycopersici sp. nov., Isolated from the Rhizosphere Soil of Tomato Plants
    Rong Ma, Shan-Wen He, Xing Wang, Kyu Kyu Thin, Ji-Gang Han, Xiao-Xia Zhang
    Current Microbiology.2022;[Epub]     CrossRef
  • Longitalea arenae gen. nov., sp. nov. and Longitalea luteola sp. nov., two new members of the family Chitinophagaceae isolated from desert soil
    Shuai Li, Lei Dong, Jia-Rui Han, Guo-Yuan Shi, Chun-Yan Lu, Lu Xu, Wen-Hui Lian, Dalal Hussien M. Alkhalifah, Wael N. Hozzein, Wen-Jun Li
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Description of Deefgea piscis sp. nov., and Deefgea tanakiae sp. nov., isolated from the gut of Korean indigenous fish
    Do-Hun Gim, So-Yeon Lee, Jeong Eun Han, Jae-Yun Lee, Seo Min Kang, Jin-Woo Bae
    Journal of Microbiology.2022; 60(11): 1061.     CrossRef
  • Fibrella aquatilis sp. nov., Fibrella rubiginis sp. nov. and Fibrella forsythiae sp. nov., isolated from freshwater, rusty iron and forsythia flower
    Heeyoung Kang, Haneul Kim, Seokhyeon Bae, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Pedomonas mirosovicensis gen. nov., sp. nov., a bacterium isolated from soil with the aid of Micrococcus luteus culture supernatant containing resuscitation-promoting factor
    Marco A. Lopez Marin, Jachym Suman, Kunal Jani, Pavel Ulbrich, Tomas Cajthaml, Petr Pajer, Jacqueline Wolf, Meina Neumann-Schaal, Michal Strejcek, Ondrej Uhlik
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Psychroflexus curvus sp. nov., Psychroflexus longus sp. nov. and Psychroflexus montanilacus sp. nov., isolated from salt lakes on the Tibetan Plateau
    Huibin Lu, Peixin Gao, Dorji Phurbu, Qinglong Wu, Peng Xing
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • (Meta)Genomic Analysis Reveals Diverse Energy Conservation Strategies Employed by Globally Distributed Gemmatimonadota
    Xiaowei Zheng, Xin Dai, Yaxin Zhu, Jian Yang, Hongchen Jiang, Hailiang Dong, Li Huang, Steven J. Hallam
    mSystems.2022;[Epub]     CrossRef
  • Complete Genome Sequence of Weissella cibaria NH9449 and Comprehensive Comparative-Genomic Analysis: Genomic Diversity and Versatility Trait Revealed
    Komwit Surachat, Duangporn Kantachote, Monwadee Wonglapsuwan, Arnon Chukamnerd, Panchalika Deachamag, Pimonsri Mittraparp-arthorn, Kongpop Jeenkeawpiam
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Sulfuricystis multivorans gen. nov., sp. nov. and Sulfuricystis thermophila sp. nov., facultatively autotropic sulfur-oxidizing bacteria isolated from a hot spring, and emended description of the genus Rugosibacter
    Hisaya Kojima, Miho Watanabe, Naoyuki Miyata, Manabu Fukui
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Draft genome sequence of Thermovorax subterraneus 70BT, a thermophile isolated from a geothermally active underground mine that produces hydrogen
    Kian Mau Goh, Kok Jun Liew, Saleha Shahar, Iffah Izzati Zakaria, Ummirul Mukminin Kahar
    Data in Brief.2022; 45: 108695.     CrossRef
  • Consumption of N2O by Flavobacterium azooxidireducens sp. nov. Isolated from Decomposing Leaf Litter of Phragmites australis (Cav.)
    Undine Behrendt, Tobias Spanner, Jürgen Augustin, Dominik H. Zak, Marcus A. Horn, Steffen Kolb, Andreas Ulrich
    Microorganisms.2022; 10(11): 2304.     CrossRef
  • Citrobacter Sp. Y3 Harboring a Novel Gene Hbcd-Hd-1 Mineralizes Hexabromocyclododecane (Hbcd) with New Metabolic Pathways Based on Multi-Omics Characterization
    Xingxing Peng, Tianyu Li, Qihang Zheng, Yingyuan Lu, Yuzhe He, Yetao Tang, Rongliang Qiu
    SSRN Electronic Journal.2022;[Epub]     CrossRef
  • Neokomagataea anthophila sp. nov., an osmotolerant acetic acid bacterium isolated in Thailand and emended description of the genus Neokomagataea
    Piyanat Charoenyingcharoen, Pattaraporn Yukphan, Sukunphat Malimas, Somsak Likhitrattanapisal, Somboon Tanasupawat, Yuzo Yamada
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Description of Flavobacterium cyclinae sp. nov. and Flavobacterium channae sp. nov., isolated from the intestines of Cyclina sinensis (Corb shell) and Channa argus (Northern snakehead)
    Seomin Kang, Jae-Yun Lee, Jeong Eun Han, Yun-Seok Jeong, Do-Hun Gim, Jin-Woo Bae
    Journal of Microbiology.2022; 60(9): 890.     CrossRef
  • Systematic whole-genome sequencing reveals an unexpected diversity among actinomycetoma pathogens and provides insights into their antibacterial susceptibilities
    Andrew Keith Watson, Bernhard Kepplinger, Sahar Mubarak Bakhiet, Najwa Adam Mhmoud, Jonathan Chapman, Nick EE Allenby, Katarzyna Mickiewicz, Michael Goodfellow, Ahmed Hassan Fahal, Jeff Errington, David John Chandler
    PLOS Neglected Tropical Diseases.2022; 16(7): e0010128.     CrossRef
  • Insights into ecological roles of uncultivated bacteria in Katase hot spring sediment from long-read metagenomics
    Shingo Kato, Sachiko Masuda, Arisa Shibata, Ken Shirasu, Moriya Ohkuma
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov. sp. nov., Bombilactobacillus folatiphilus sp. nov. and Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid bacterial isolates from stingless bees Tetragonula ca
    Scott A. Oliphant, Nathan S. Watson-Haigh, Krista M. Sumby, Jennifer Gardner, Scott Groom, Vladimir Jiranek
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Description of Prasinibacter corallicola gen. nov., sp. nov., a zeaxanthin-producing bacterium isolated from stony coral Porites lutea
    Guanghua Wang, Jianfeng Liu, Yuanjin Li, Jin Li, Jixin Luo, Biao Chen, Zhiheng Liao, Hongfei Su, Jiayuan Liang, Kefu Yu
    Antonie van Leeuwenhoek.2022; 115(7): 933.     CrossRef
  • Faunimonas pinastri gen. nov., sp. nov., an endophyte from a pine tree of the family Pleomorphomonadaceae, class Alphaproteobacteria
    Diogo N. Proença, William B. Whitman, Nicole Shapiro, Tanja Woyke, Nikos C. Kyrpides, Paula V. Morais
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Physiological and genomic characterisation of Luteimonas fraxinea sp. nov., a bacterial species associated with trees tolerant to ash dieback
    Kristina Ulrich, Regina Becker, Undine Behrendt, Michael Kube, Volker Schneck, Andreas Ulrich
    Systematic and Applied Microbiology.2022; 45(4): 126333.     CrossRef
  • Neglectibacter timonensis gen. nov., sp. nov. and Scatolibacter rhodanostii gen. nov., sp. nov., two anaerobic bacteria isolated from human stool samples
    Rita Zgheib, Ahmad Ibrahim, Hussein Anani, Sokhna Ndongo, Melhem Bilen, Nicholas Armstrong, Magali Richez, Didier Raoult, Pierre-Edouard Fournier
    Archives of Microbiology.2022;[Epub]     CrossRef
  • A stable home for an equine pathogen: valid publication of the binomial Prescottella equi gen. nov., comb. nov., and reclassification of four rhodococcal species into the genus Prescottella.
    Vartul Sangal, Michael Goodfellow, Amanda L. Jones, Iain C. Sutcliffe
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Devosia ureilytica sp. nov., isolated from Kuche River in China
    Bin-Bin Li, Xiao-Juan Zhang, Danni Wu, Dan-Dan Zhang, Bao-Zhu Fang, Hong-Can Liu, Yu-Guang Zhou, Man Cai, Wen-Jun Li, Guo-Xing Nie
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Sphingomonas arenae sp. nov., isolated from desert soil
    Lei Dong, Shuai Li, Wen-Hui Lian, Qi-Chuang Wei, Osama Abdalla Abdelshafy Mohamad, Wael N. Hozzein, Iftikhar Ahmed, Wen-Jun Li
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Prokaryotes of renowned Karlovy Vary (Carlsbad) thermal springs: phylogenetic and cultivation analysis
    Tereza Smrhova, Kunal Jani, Petr Pajer, Gabriela Kapinusova, Tomas Vylita, Jachym Suman, Michal Strejcek, Ondrej Uhlik
    Environmental Microbiome.2022;[Epub]     CrossRef
  • Dongia deserti sp. nov., Isolated from the Gurbantunggut Desert Soil
    Chun-Yan Lu, Lei Dong, Dong Wang, Shuai Li, Bao-Zhu Fang, Ming-Xian Han, Feng Liu, Hong-Chen Jiang, Iftikhar Ahmed, Wen-Jun Li
    Current Microbiology.2022;[Epub]     CrossRef
  • Cell Wall Glycopolymers as a Diagnostic Trait of Arthrobacter crystallopoietes
    N. V. Potekhina, E. V. Ariskina, A. S. Shashkov, T. M. Tul’skaya, L. I. Evtushenko
    Microbiology.2022; 91(3): 259.     CrossRef
  • Variovorax terrae sp. nov. Isolated from Soil with Potential Antioxidant Activity
    Chae Yung Woo, Jaisoo Kim
    Journal of Microbiology and Biotechnology.2022; 32(7): 855.     CrossRef
  • Parasphingorhabdus cellanae sp. nov., isolated from the gut of a Korean limpet, Cellana toreuma
    Ji-Ho Yoo, Jeong Eun Han, June-Young Lee, Su-Won Jeong, Yun-Seok Jeong, Jae-Yun Lee, So-Yeon Lee, Hojun Sung, Euon Jung Tak, Hyun Sik Kim, Pil Soo Kim, Jee-Won Choi, Do-Yeon Kim, In Chul Jeong, Do-Hun Gim, Seo Min Kang, Jin-Woo Bae
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Algiphilus acroporae sp. nov. and Coraliihabitans acroporae gen. nov. sp. nov., isolated from scleractinian coral Acropora digitifera
    Hao Sun, Huina Zheng, Baolin Liao, Bogui Chen, Aihua Li, Baohua Xiao
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Comparative Genomics Reveal the Animal-Associated Features of the Acanthopleuribacteraceae Bacteria, and Description of Sulfidibacter corallicola gen. nov., sp., nov.
    Guanghua Wang, Yuanjin Li, Jianfeng Liu, Biao Chen, Hongfei Su, Jiayuan Liang, Wen Huang, Kefu Yu
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Oceanobacillus alkalisoli sp. nov., an alkaliphilic bacterium isolated from saline-alkaline soil
    Pin-Jiao Jin, Lei Sun, Manik Prabhu Narsing Rao, Jian-Yu Jiao, Xiu-Jun Sun, Wen-Jun Li, Shuang Wang
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Sabulibacter ruber gen. nov., sp. nov., a novel bacterium in the family Hymenobacteraceae, isolated from desert soil
    Wen-Hui Lian, Shuai Li, Zhi-Liang Lin, Jia-Rui Han, Osama Abdalla Abdelshafy Mohamad, Li Li, Ying Lin, Wael N. Hozzein, Lei Dong, Wen-Jun Li
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Sessilibacter corallicola gen. nov., sp. nov., a sessile bacterium isolated from coral Porites lutea
    Jianfeng Liu, Jin Li, Jixin Luo, Yuanjin Li, Zian Yang, Chengli Huang, Feilong Sun, Guanghua Wang
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Genomic and physiological analysis of C50 carotenoid-producing novel Halorubrum ruber sp. nov.
    Chi Young Hwang, Eui-Sang Cho, Won Jong Rhee, Eunjung Kim, Myung-Ji Seo
    Journal of Microbiology.2022; 60(10): 1007.     CrossRef
  • Novosphingobium percolationis sp. nov. and Novosphingobium huizhouense sp. nov., isolated from landfill leachate of a domestic waste treatment plant
    Xiaoling He, Huibin Lu, Wenzhe Hu, Tongchu Deng, Xiaofan Gong, Xunan Yang, Da Song, Mei He, Meiying Xu
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Enterovibrio paralichthyis sp. nov., isolated from the gut of an olive flounder Paralichthys olivaceus
    Young-Ok Kim, In-Suk Park, Dong-Gyun Kim, Sooyeon Park, Sung Hoon Han, Jung-Hoon Yoon
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Desulfofustis limnaeus sp. nov., a freshwater sulfate-reducing bacterium isolated from marsh soil
    Miho Watanabe, Ayaka Takahashi, Hisaya Kojima, Naoyuki Miyata, Manabu Fukui
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Taxogenomic status of phylogenetically distant Frankia clusters warrants their elevation to the rank of genus: A description of Protofrankia gen. nov., Parafrankia gen. nov., and Pseudofrankia gen. nov. as three novel genera within the family Frankiaceae
    Maher Gtari
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Genomic and Physiological Characterization of Metabacillus flavus sp. nov., a Novel Carotenoid-Producing Bacilli Isolated from Korean Marine Mud
    Chi Young Hwang, Eui-Sang Cho, Deok Jun Yoon, In-Tae Cha, Dong-Hyun Jung, Young-Do Nam, So-Lim Park, Seong-Il Lim, Myung-Ji Seo
    Microorganisms.2022; 10(5): 979.     CrossRef
  • Nocardioides palaemonis sp. nov. and Tessaracoccus palaemonis sp. nov., isolated from the gastrointestinal tract of lake prawn
    Do-Yeon Kim, In-Chul Jeong, So-Yeon Lee, Yun-Seok Jeong, Jeong Eun Han, Euon Jung Tak, June-Young Lee, Pil Soo Kim, Dong-Wook Hyun, Jin-Woo Bae
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Description of Ornithinimicrobium ciconiae sp. nov., and Ornithinimicrobium avium sp. nov., isolated from the faeces of the endangered and near-threatened birds
    So-Yeon Lee, Hojun Sung, Pil Soo Kim, Hyun Sik Kim, Jae-Yun Lee, June-Young Lee, Yun-Seok Jeong, Euon Jung Tak, Jeong Eun Han, Dong-Wook Hyun, Jin-Woo Bae
    Journal of Microbiology.2021; 59(11): 978.     CrossRef
  • Phylogenomic Analyses of the Genus Pseudomonas Lead to the Rearrangement of Several Species and the Definition of New Genera
    Zaki Saati-Santamaría, Ezequiel Peral-Aranega, Encarna Velázquez, Raúl Rivas, Paula García-Fraile
    Biology.2021; 10(8): 782.     CrossRef
  • Pseudomarimonas arenosa gen. nov., sp. nov. isolated from marine sand
    Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Yangia mangrovi sp. nov., a novel member of the Roseobacter clade isolated from mangrove soil and emended description of Yangia pacifica Dai et al. 2006
    Ashish Verma, Shiva S. Sundharam, Yash Pal, Bhawana Bisht, Pooja Yadav, Srinivasan Krishnamurthi
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef

Journal of Microbiology : Journal of Microbiology
TOP