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Catarina Magalhães 2 Articles
Salinity as a Regulator of DMSP Degradation in Ruegeria pomeroyi DSS-3
Paula Salgado , Ronald Kiene , William Wiebe , Catarina Magalhães
J. Microbiol. 2014;52(11):948-954.   Published online October 3, 2014
DOI: https://doi.org/10.1007/s12275-014-4409-1
  • 993 View
  • 1 Download
  • 17 Crossref
AbstractAbstract PDF
Dimethylsulfoniopropionate (DMSP) is an important carbon and sulfur source to marine bacterial communities and the main precursor of dimethylsulfide (DMS), a gas that influences atmospheric chemistry and potentially the global climate. In nature, bacterial DMSP catabolism can yield different proportions of DMS and methanethiol (MeSH), but relatively little is known about the factors controlling the pathways of bacterial degradation that select between their formation (cleavage vs. demethiolation). In this study, we carried out experiments to evaluate the influence of salinity on the routes of DMSP catabolism in Ruegeria pomeroyi DSS-3. We monitored DMS and MeSH accumulation in cell suspensions grown in a range of salinities (10, 20, 30 ppt) and with different DMSP amendments (0, 50, 500 μM). Significantly higher concentrations of DMS accumulated in low salinity treatments (10 ppt; P < 0.001), in both Marine Basal Medium (MBM) and half-strength Yeast Tryptone Sea Salts (½ YTSS) media. Results showed a 47.1% and 87.5% decrease of DMS accumulation, from salinity 10 to 20 ppt, in MBM and ½ YTSS media, respectively. On the other hand, MeSH showed enhanced accumulations at higher salinities (20, 30 ppt), with a 90.6% increase of MeSH accumulation from the 20 ppt to the 30 ppt salinity treatments. Our results with R. pomeroyi DSS-3 in culture are in agreement with previous results from estuarine sediments and demonstrate that salinity can modulate selection of the DMSP enzymatic degradation routes, with a consequent potential impact on DMS and MeSH liberation into the atmosphere.

Citations

Citations to this article as recorded by  
  • Response of distributions and emissions of summer biogenic sulfur in the Pacific Arctic to enhanced Pacific Water inflow
    Cheng‐Xuan Li, Bao‐Dong Wang, Kan Chen, Gui‐Peng Yang, Jian‐Fang Chen, Li‐Na Lin, Zi‐Cheng Wang
    Limnology and Oceanography.2024; 69(1): 81.     CrossRef
  • Nested cross-validation Gaussian process to model dimethylsulfide mesoscale variations in warm oligotrophic Mediterranean seawater
    Karam Mansour, Stefano Decesari, Marco Paglione, Silvia Becagli, Matteo Rinaldi
    npj Climate and Atmospheric Science.2024;[Epub]     CrossRef
  • SAR92 clade bacteria are potentially important DMSP degraders and sources of climate-active gases in marine environments
    Xiao-Yan He, Ning-Hua Liu, Ji-Qing Liu, Ming Peng, Zhao-Jie Teng, Tie-Ji Gu, Xiu-Lan Chen, Yin Chen, Peng Wang, Chun-Yang Li, Jonathan D. Todd, Yu-Zhong Zhang, Xi-Ying Zhang, Jennifer B. H. Martiny
    mBio.2023;[Epub]     CrossRef
  • Methylotrophic bacteria with cobalamin-dependent mutases in primary metabolism as potential strains for vitamin B12 production
    Darya Dudko, Dirk Holtmann, Markus Buchhaupt
    Antonie van Leeuwenhoek.2023; 116(3): 207.     CrossRef
  • Marine gas-phase sulfur emissions during an induced phytoplankton bloom
    Delaney B. Kilgour, Gordon A. Novak, Jon S. Sauer, Alexia N. Moore, Julie Dinasquet, Sarah Amiri, Emily B. Franklin, Kathryn Mayer, Margaux Winter, Clare K. Morris, Tyler Price, Francesca Malfatti, Daniel R. Crocker, Christopher Lee, Christopher D. Cappa,
    Atmospheric Chemistry and Physics.2022; 22(2): 1601.     CrossRef
  • DMSP Production by Coral-Associated Bacteria
    Felicity W.I. Kuek, Cherie A. Motti, Jia Zhang, Ira R. Cooke, Jonathan D. Todd, David J. Miller, David G. Bourne, Jean-Baptiste Raina
    Frontiers in Marine Science.2022;[Epub]     CrossRef
  • Stressed out: Bacterial response to high salinity using compatible solute biosynthesis and uptake systems, lessons from Vibrionaceae
    Gwendolyn J. Gregory, E. Fidelma Boyd
    Computational and Structural Biotechnology Journal.2021; 19: 1014.     CrossRef
  • Evolutionary history of dimethylsulfoniopropionate (DMSP) demethylation enzyme DmdA in marine bacteria
    Laura Hernández, Alberto Vicens, Luis E. Eguiarte, Valeria Souza, Valerie De Anda, José M. González
    PeerJ.2020; 8: e9861.     CrossRef
  • Role of Calanus sinicus (Copepoda, Calanoida) on Dimethylsulfide and Dimethylsulfoniopropionate Production in Jiaozhou Bay
    J. Yu, J.‐Y. Tian, Z.‐Y. Zhang, G.‐P. Yang, H.‐J. Chen, R. Xu, R. Chen
    Journal of Geophysical Research: Biogeosciences.2019; 124(8): 2481.     CrossRef
  • Phylogenetic diversity of dimethylsulfoniopropionatedependent demethylase gene dmdA in distantly related bacteria isolated from Arctic and Antarctic marine environments
    Yinxin Zeng
    Acta Oceanologica Sinica.2019; 38(8): 64.     CrossRef
  • Excellent Degradation Performance of a Versatile Phthalic Acid Esters-Degrading Bacterium and Catalytic Mechanism of Monoalkyl Phthalate Hydrolase
    Shuanghu Fan, Junhuan Wang, Yanchun Yan, Jiayi Wang, Yang Jia
    International Journal of Molecular Sciences.2018; 19(9): 2803.     CrossRef
  • Distributions of dimethylsulfide and its related compounds in the Yangtze (Changjiang) River Estuary and its adjacent waters in early summer
    Ting-Ting Tan, Xi Wu, Chun-Ying Liu, Gui-Peng Yang
    Continental Shelf Research.2017; 146: 89.     CrossRef
  • Occurrence and Turnover of Biogenic Sulfur in the Bering Sea During Summer
    Cheng‐Xuan Li, Bao‐Dong Wang, Gui‐Peng Yang, Zi‐Cheng Wang, Jian‐Fang Chen, Yang Lyu
    Journal of Geophysical Research: Oceans.2017; 122(11): 8567.     CrossRef
  • Evolution of Dimethylsulfoniopropionate Metabolism in Marine Phytoplankton and Bacteria
    Hannah A. Bullock, Haiwei Luo, William B. Whitman
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Small RNAs expressed during dimethylsulfoniopropionate degradation by a model marine bacterium
    Andrew S. Burns, Hannah A. Bullock, Christa Smith, Qiuyuan Huang, William B. Whitman, Mary Ann Moran
    Environmental Microbiology Reports.2016; 8(5): 763.     CrossRef
  • Osmoprotective role of dimethylsulfoniopropionate (DMSP) for estuarine bacterioplankton
    J Motard-Côté, RP Kiene
    Aquatic Microbial Ecology.2015; 76(2): 133.     CrossRef
  • Impact of river discharge on distribution of dimethyl sulfide (DMS) and its fluxes in the coastal Bay of Bengal
    V.D. Rao, R. Viswanadham, M.D. Bharathi, V.V.S.S. Sarma, M.D. Kumar
    Journal of Sea Research.2015; 103: 32.     CrossRef
The History of Aerobic Ammonia Oxidizers: from the First Discoveries to Today
Maria Monteiro , Joana Séneca , Catarina Magalhães
J. Microbiol. 2014;52(7):537-547.   Published online June 28, 2014
DOI: https://doi.org/10.1007/s12275-014-4114-0
  • 1,143 View
  • 1 Download
  • 64 Crossref
AbstractAbstract PDF
Nitrification, the oxidation of ammonia to nitrite and nitrate, has long been considered a central biological process in the global nitrogen cycle, with its first description dated 133 years ago. Until 2005, bacteria were considered the only organisms capable of nitrification. However, the recent discovery of a chemoautotrophic ammonia-oxidizing archaeon, Nitrosopumilusmaritimus, changed our concept of the range of organisms involved in nitrification, highlighting the importance of ammonia-oxidizing archaea (AOA) as potential players in global biogeochemical nitrogen transformations. The uniqueness of these archaea justified the creation of a novel archaeal phylum, Thaumarchaeota. These recent discoveries increased the global scientific interest within the microbial ecology society and have triggered an analysis of the importance of bacterial vs archaeal ammonia oxidation in a wide range of natural ecosystems. In thismini review we provide a chronological perspective of the current knowledge on the ammonia oxidation pathway of nitrification, based on the main physiological, ecological and genomic discoveries.

Citations

Citations to this article as recorded by  
  • Mitigating nitrous oxide emissions through iron amendments in water-saving irrigated paddy fields: A review
    Md Roconuzzaman Nasim, Joy Sarker, Khadija Khatun Keya, Md. Hasibul Hasan, Sharmin Akter, Md. Rafiqul Islam
    Journal of Environmental Science, Health & Sustainability.2026; 2(1): 3.     CrossRef
  • Abundance and partitioning of nitrogen and phosphorus in Lake Chaohu, China: Seasonal particulate effects on lake re-eutrophication
    Cao Fang, Pengcheng Ju, Yafang Song, Weikun Li, Zongbin Zhang, Youfei Fang, Yulu Xue, Jingjing Zhao, Zhangqin Zheng, Zhongyi Zhang, Xueying Wang, Jihua Hao, Xiaodong Liu
    Journal of Environmental Sciences.2026; 166: 11.     CrossRef
  • Four typical N2O emission regimes in temperate monsoon-type urban rivers unraveled via quantified microbial sources under coupled natural hydrological and anthropogenic perturbations
    Shuo Wang, Shengjie Li, Yiru Chen, Zhengzhu Dang, Ru Guo, Xianfang Zhu, Wei Zhi, Guodong Ji
    Water Research.2026; 300: 125920.     CrossRef
  • Distinct interaction between management history and nitrogen source drive microbial nitrogen processes in soil
    Misato Toda, Michael Scheifele, Jochen Mayer, Marcel G.A. van der Heijden, Florian Walder
    Applied Soil Ecology.2026; 223: 107075.     CrossRef
  • Quantifying the Contribution of Cryptic Sulfide-Driven Autotrophic Denitrification to N2O Production in a Seasonally Hypoxic River-Reservoir System
    Shuo Wang, Shengjie Li, He Lyu, Wei Zhi, Zhengzhu Dang, Ru Guo, Xianfang Zhu, Guodong Ji
    Environmental Science & Technology.2026; 60(19): 14011.     CrossRef
  • Ammonia-oxidizing archaea in host-associated environments and the oral microbiome: Ecological evidence and molecular detection
    Jessica Alexandra de Vasques Castro Oliveira, Maria Izabel Souza Moreira, Camila Pinho e Souza Coelho, Aline Belmok, Jessica Alves de Cena, Naile Dame-Teixeira
    Archives of Oral Biology.2026; 192: 106769.     CrossRef
  • Research progress on ammonia oxidizing microorganisms: The discovery, nitrogen metabolic pathways, influencing factors and contribution rate
    Yanyan Wang, Weihua Zhao, Meng Bai, Yingying Qin
    Journal of Environmental Chemical Engineering.2025; 13(5): 117477.     CrossRef
  • Canonical ammonia oxidizers and comammox Clade A play active roles in nitrification in a black soil at different pH and ammonium concentrations
    Xin Bai, Xiaojing Hu, Junjie Liu, Zhenhua Yu, Jian Jin, Xiaobing Liu, Guanghua Wang
    Biology and Fertility of Soils.2024; 60(4): 471.     CrossRef
  • Chromolaena odorata affects soil nitrogen transformations and competition in tropical coral islands by altering soil ammonia oxidizing microbes
    Chengzhi Yuan, Jia Gao, Luping Huang, Shuguang Jian
    Science of The Total Environment.2024; 950: 175196.     CrossRef
  • Long-neglected contribution of nitrification to N2O emissions in the Yellow River
    Shuo Wang, Shengjie Li, Mingfei Ji, Jiarui Li, Jilin Huang, Zhengzhu Dang, Zhuo Jiang, Shuqi Zhang, Xianfang Zhu, Guodong Ji
    Environmental Pollution.2024; 351: 124099.     CrossRef
  • Mechanism of stable autotrophic nitrogen removal and NOB inhibition in low-sludge PN-Anammox system under non-temperature control and low ammonia environment
    Pei-ling Xu, Xiang Li, Yayi Wang, Yan Yuan, Han Wang, Yong Huang, Jun Ma, Miao Shi
    Chemical Engineering Journal.2024; 490: 151928.     CrossRef
  • Key enzymes, functional genes, and metabolic pathways of the nitrogen removal-related microorganisms
    Chunxia Zheng, Tengxia He, Cerong Wang, Manman Zhang, Li Yang, Lu Yang
    Critical Reviews in Environmental Science and Technology.2024; 54(23): 1672.     CrossRef
  • Rapid and Inexpensive Assay for Testing the Efficiency of Potential New Synthetic Nitrification Inhibitors
    Sibel C. Yildirim, Robert M. Walker, Ute Roessner, Uta Wille
    ACS Agricultural Science & Technology.2023; 3(3): 260.     CrossRef
  • Carbon fixation by chemoautotrophic microbes and strategies for their artificial regulation
    Qing Chang, Zhanhua Zhang, Yaqi Liu, Tong Zhang
    Chinese Science Bulletin.2023; 68(28-29): 3792.     CrossRef
  • Connecting the Pipes: Agricultural Tile Drains and Elevated Imidacloprid Brain Concentrations in Juvenile Northern Leopard Frogs (Rana pipiens)
    Kaitlyn S. Campbell, Peyton Keller, Svetlana A. Golovko, Drew Seeger, Mikhail Y. Golovko, Jacob L. Kerby
    Environmental Science & Technology.2023; 57(7): 2758.     CrossRef
  • Increasing Italian ryegrass (Lolium multiflorum Lam.) regrowth via inoculation with an ammonia‐oxidizing bacterial strain
    Di Wu, Ke Ma, Xiao‐Ling Wang, Lin Qi, Yu‐Hua Liu, Peng Song, Wei Liu, Ming‐Ming Zhang, Wei Zhao, Cheng‐Wei Song
    Grassland Science.2023; 69(1): 51.     CrossRef
  • Interactions between Phosphorus Enrichment and Nitrification Accelerate Relative Nitrogen Deficiency during Cyanobacterial Blooms in a Large Shallow Eutrophic Lake
    Zijun Zhou, Yuqian Liu, Siyang Wang, Jian Xiao, Xiuyun Cao, Yiyong Zhou, Chunlei Song
    Environmental Science & Technology.2023; 57(7): 2992.     CrossRef
  • Research advances of ammonia oxidation microorganisms in wastewater: metabolic characteristics, microbial community, influencing factors and process applications
    Weihua Zhao, Xuejun Bi, Meng Bai, Yanyan Wang
    Bioprocess and Biosystems Engineering.2023; 46(5): 621.     CrossRef
  • Diversity of the Hydroxylamine Oxidoreductase (HAO) Gene and Its Enzyme Active Site in Agricultural Field Soils
    Tsubasa Ohbayashi, Yong Wang, Luciano Nobuhiro Aoyagi, Shintaro Hara, Kanako Tago, Masahito Hayatsu
    Microbes and Environments.2023; 38(4): n/a.     CrossRef
  • Nitrous oxide emission in altered nitrogen cycle and implications for climate change
    Babita Aryal, Roshni Gurung, Aline F. Camargo, Gislaine Fongaro, Helen Treichel, Bandita Mainali, Michael J. Angove, Huu Hao Ngo, Wenshan Guo, Shukra Raj Puadel
    Environmental Pollution.2022; 314: 120272.     CrossRef
  • Soils and sediments host Thermoplasmata archaea encoding novel copper membrane monooxygenases (CuMMOs)
    Spencer Diamond, Adi Lavy, Alexander Crits-Christoph, Paula B Matheus Carnevali, Allison Sharrar, Kenneth H Williams, Jillian F Banfield
    The ISME Journal.2022; 16(5): 1348.     CrossRef
  • Reactive Transport of NH4+ in the Hyporheic Zone from the Ground Water to the Surface Water
    Ailan Yan, Xianyan Guo, Donghui Hu, Xiaoyang Chen
    Water.2022; 14(8): 1237.     CrossRef
  • Liming and grazing intensities effects on soil mineral nitrogen throughout the pasture cycle in a subtropical integrated crop-livestock system
    Felipe Dalla-zen Bertol, Amanda Posselt Martins, Luiz Gustavo de Oliveira Denardin, Taise Robinson Kunrath, William de Souza, Mateus Westerhofer Goulart, Paulo César de Faccio Carvalho, Ibanor Anghinoni
    Revista Brasileira de Ciência do Solo.2022;[Epub]     CrossRef
  • Novel database and cut-off value for bacterial amoA gene revealed a spatial variability pattern of the ammonia-oxidizing bacteria community from river to sea
    Jiaqi Ye, Jiapeng Wu, Wenfang Deng, Yiben Li, Cuihong Jiang, Yu Wang, Yiguo Hong
    Marine Pollution Bulletin.2022; 185: 114351.     CrossRef
  • Metabolic Diversity and Aero-Tolerance in Anammox Bacteria from Geochemically Distinct Aquifers
    Olivia E. Mosley, Emilie Gios, Louise Weaver, Murray Close, Chris Daughney, Rob van der Raaij, Heather Martindale, Kim M. Handley, Theodore M. Flynn
    mSystems.2022;[Epub]     CrossRef
  • Simultaneous removal of H2S and NH3 from raw biogas in hollow fibre membrane bioreactors
    Jewel Das, Stephen Nolan, Piet N.L. Lens
    Environmental Technology & Innovation.2022; 28: 102777.     CrossRef
  • Recent advancements in the biological treatment of high strength ammonia wastewater
    Evan Ronan, Hussain Aqeel, Gideon M. Wolfaardt, Steven N. Liss
    World Journal of Microbiology and Biotechnology.2021;[Epub]     CrossRef
  • Responses of Ammonia-Oxidizing Archaea and Bacteria in Malodorous River Sediments to Different Remediation Techniques
    Yan He, Yunchang Zhou, Rui Weng, Jianhua Wang, Jinghan Chen, Minsheng Huang
    Microbial Ecology.2021; 81(2): 314.     CrossRef
  • Community diversity and abundance of ammonia‐oxidizing archaea and bacteria in shrimp pond sediment at different culture stages
    D. Wei, S. Zeng, D. Hou, R. Zhou, C. Xing, X. Deng, L. Yu, H. Wang, Z. Deng, S. Weng, Z. Huang, J. He
    Journal of Applied Microbiology.2021; 130(5): 1442.     CrossRef
  • Biofilm and microbiome response of attached growth nitrification systems across incremental decreases to low temperatures
    Warsama Ahmed, Robert Delatolla
    Journal of Water Process Engineering.2021; 39: 101730.     CrossRef
  • Multiheme hydroxylamine oxidoreductases produce NO during ammonia oxidation in methanotrophs
    Wouter Versantvoort, Arjan Pol, Mike S. M. Jetten, Laura van Niftrik, Joachim Reimann, Boran Kartal, Huub J. M. Op den Camp
    Proceedings of the National Academy of Sciences.2020; 117(39): 24459.     CrossRef
  • Nitrogen Retention in Mesocosm Sediments Received Rural Wastewater Associated with Microbial Community Response to Plant Species
    Zhixin Dong, Lei Hu, Jianmei Li, Mathieu Nsenga Kumwimba, Jialiang Tang, Bo Zhu
    Water.2020; 12(11): 3035.     CrossRef
  • Correlations of functional genes involved in methane, nitrogen and sulfur cycling in river sediments
    Mingzhu Zhang, Yang Li, Qingye Sun, Piaoxue Chen, Xuhao Wei
    Ecological Indicators.2020; 115: 106411.     CrossRef
  • Deep amoA amplicon sequencing reveals community partitioning within ammonia-oxidizing bacteria in the environmentally dynamic estuary of the River Elbe
    M. Malinowski, M. Alawi, I. Krohn, S. Ruff, D. Indenbirken, M. Alawi, M. Karrasch, R. Lüschow, W. R. Streit, G. Timmermann, A. Pommerening-Röser
    Scientific Reports.2020;[Epub]     CrossRef
  • Microbial response of nitrifying biofilms to cold-shock
    Warsama Ahmed, Robert Delatolla
    Environmental Science: Water Research & Technology.2020; 6(12): 3428.     CrossRef
  • Combined Effects of Straw Returning and Chemical N Fertilization on Greenhouse Gas Emissions and Yield from Paddy Fields in Northwest Hubei Province, China
    Quanyi Hu, Tianqi Liu, Songsong Jiang, Cougui Cao, Chengfang Li, Bin Chen, Junbo Liu
    Journal of Soil Science and Plant Nutrition.2020; 20(2): 392.     CrossRef
  • Small Sample Stress: Probing Oxygen-Deprived Ammonia-Oxidizing Bacteria with Raman Spectroscopy In Vivo
    Ann-Kathrin Kniggendorf, Regina Nogueira, Somayeh Nasiri Bahmanabad, Andreas Pommerening-Röser, Bernhard Wilhelm Roth
    Microorganisms.2020; 8(3): 432.     CrossRef
  • Faunal and microbial biodiversity of the newly discovered Deyin-1 hydrothermal vent field at 15°S on the southern Mid-Atlantic Ridge
    Chunming Dong, Yanrong Xie, Huaiming Li, Qiliang Lai, Xiupian Liu, Zongze Shao
    Deep Sea Research Part I: Oceanographic Research Papers.2019; 153: 103134.     CrossRef
  • Roles of ammonia-oxidizing bacteria in improving metabolism and cometabolism of trace organic chemicals in biological wastewater treatment processes: A review
    Mathieu Nsenga Kumwimba, Fangang Meng
    Science of The Total Environment.2019; 659: 419.     CrossRef
  • Major role of ammonia-oxidizing bacteria in N2O production in the Pearl River estuary
    Li Ma, Hua Lin, Xiabing Xie, Minhan Dai, Yao Zhang
    Biogeosciences.2019; 16(24): 4765.     CrossRef
  • Management versus site effects on the abundance of nitrifiers and denitrifiers in European mountain grasslands
    Ute Szukics, Karl Grigulis, Nicolas Legay, Eva-Maria Kastl, Catherine Baxendale, Richard D. Bardgett, Jean-Christophe Clément, Sandra Lavorel, Michael Schloter, Michael Bahn
    Science of The Total Environment.2019; 648: 745.     CrossRef
  • Abundance of AOA, AOB, nirS, nirK, and nosZ in red soil of China under different land use
    N Zulkarnaen, Y Zhang, P Zhang, Y Liu, Y Cheng, J Zhao, J Zhang
    IOP Conference Series: Earth and Environmental Science.2019; 393(1): 012007.     CrossRef
  • Ammonia Oxidizers as Biological Health Indicators of Elevated Zn and Cu in Poultry Litter Amended Soil
    Abha Mundepi, Miguel Cabrera, Jeanette Norton, Mussie Habteselassie
    Water, Air, & Soil Pollution.2019;[Epub]     CrossRef
  • Microbiology and Nitrogen Cycle in the Benthic Sediments of a Glacial Oligotrophic Deep Andean Lake as Analog of Ancient Martian Lake-Beds
    Victor Parro, Fernando Puente-Sánchez, Nathalie A. Cabrol, Ignacio Gallardo-Carreño, Mercedes Moreno-Paz, Yolanda Blanco, Miriam García-Villadangos, Cristian Tambley, Virginie C. Tilot, Cody Thompson, Eric Smith, Pablo Sobrón, Cecilia S. Demergasso, Alex
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Quantitative and qualitative studies of microorganisms involved in full‐scale autotrophic nitrogen removal performance
    Barbara Muñoz‐Palazon, Alejandro Rodriguez‐Sanchez, Antonio Castellano‐Hinojosa, Jesus Gonzalez‐Lopez, Mark C. M. van Loosdrecth, Riku Vahala, Alejandro Gonzalez‐Martinez
    AIChE Journal.2018; 64(2): 457.     CrossRef
  • Nitrification and nitrifiers in acidic soils
    Yaying Li, Stephen J. Chapman, Graeme W. Nicol, Huaiying Yao
    Soil Biology and Biochemistry.2018; 116: 290.     CrossRef
  • Ammonia-oxidizing archaea and bacteria responding differently to fertilizer type and irrigation frequency as revealed by Illumina Miseq sequencing
    Ya-Dong Yang, Yong-Feng Ren, Xi-Quan Wang, Yue-Gao Hu, Zhi-Min Wang, Zhao-Hai Zeng
    Journal of Soils and Sediments.2018; 18(3): 1029.     CrossRef
  • Comparison of Archaeal Communities in Mineral Soils at a Boreal Forest in Finland and a Cold-Temperate Forest in Japan
    Reika Isoda, Shintaro Hara, Teemu Tahvanainen, Yasuyuki Hashidoko
    Microbes and environments.2017; 32(4): 390.     CrossRef
  • Screening and optimizing of inhibitors for ammonia-oxidizing bacteria in sediments of malodorous river
    Jianhua Wang, Yan He, Jin Zhu, Huimin Guan, Minsheng Huang
    Applied Microbiology and Biotechnology.2017; 101(15): 6193.     CrossRef
  • Commentary on ‘Inhibition by acetylene of ammonia oxidation in Nitrosomonas europaea’
    Russell K. Hynes
    FEMS Microbiology Letters.2017;[Epub]     CrossRef
  • Research trends and hotspots related to ammonia oxidation based on bibliometric analysis
    Maosheng Zheng, Hui-Zhen Fu, Yuh-Shan Ho
    Environmental Science and Pollution Research.2017; 24(25): 20409.     CrossRef
  • Pyruvic oxime dioxygenase from heterotrophic nitrifier Alcaligenes faecalis is a nonheme Fe(II)-dependent enzyme homologous to class II aldolase
    Shuhei Tsujino, Chisato Uematsu, Hideo Dohra, Taketomo Fujiwara
    Scientific Reports.2017;[Epub]     CrossRef
  • Inhibition factors in biofilm N removal systems treating wastes generated by amine based CO 2 capture
    Ingrid A. Henry, Aslak Einbu, Hallvard F. Svendsen, Ingrid Bakke, Kjetill ÿstgaard
    International Journal of Greenhouse Gas Control.2016; 45: 200.     CrossRef
  • Anammox Biochemistry: a Tale of Heme c Proteins
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    Trends in Biochemical Sciences.2016; 41(12): 998.     CrossRef
  • Gut Bacteria and Hydrogen Sulfide: The New Old Players in Circulatory System Homeostasis
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    Molecules.2016; 21(11): 1558.     CrossRef
  • Archaeal ammonium oxidation coupled with bacterial nitrite oxidation in a simulated drinking water premise plumbing system
    Gem E. Santillana, Heidi J. Smith, Mark Burr, Anne K. Camper
    Environmental Science: Water Research & Technology.2016; 2(4): 658.     CrossRef
  • Urea Hydrolysis Rate in Soil Toposequences as Influenced by pH, Carbon, Nitrogen, and Soluble Metals
    Kristin A. Fisher, John J. Meisinger, Bruce R. James
    Journal of Environmental Quality.2016; 45(1): 349.     CrossRef
  • High cell density cultivation of the chemolithoautotrophic bacterium Nitrosomonas europaea
    Benedek Papp, Tibor Török, Erzsébet Sándor, Erzsébet Fekete, Michel Flipphi, Levente Karaffa
    Folia Microbiologica.2016; 61(3): 191.     CrossRef
  • Performance Assessment of Full-Scale Wastewater Treatment Plants Based on Seasonal Variability of Microbial Communities via High-Throughput Sequencing
    Tang Liu, Shufeng Liu, Maosheng Zheng, Qian Chen, Jinren Ni, Andrew C Singer
    PLOS ONE.2016; 11(4): e0152998.     CrossRef
  • Shifts in taxonomic and functional microbial diversity with agriculture: How fragile is the Brazilian Cerrado?
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    BMC Microbiology.2016;[Epub]     CrossRef
  • Species, Abundance and Function of Ammonia-oxidizing Archaea in Inland Waters across China
    Leiliu Zhou, Shanyun Wang, Yuxuan Zou, Chao Xia, Guibing Zhu
    Scientific Reports.2015;[Epub]     CrossRef
  • Cytochromes c in Archaea: distribution, maturation, cell architecture, and the special case of Ignicoccus hospitalis
    Arnulf Kletzin, Thomas Heimerl, Jennifer Flechsler, Laura van Niftrik, Reinhard Rachel, Andreas Klingl
    Frontiers in Microbiology.2015;[Epub]     CrossRef
  • Microbial diversity in a Venezuelan orthoquartzite cave is dominated by the Chloroflexi (Class Ktedonobacterales) and Thaumarchaeota Group I.1c
    Hazel A. Barton, Juan G. Giarrizzo, Paula Suarez, Charles E. Robertson, Mark J. Broering, Eric D. Banks, Parag A. Vaishampayan, Kasthisuri Venkateswaran
    Frontiers in Microbiology.2014;[Epub]     CrossRef
  • The ecological dichotomy of ammonia-oxidizing archaea and bacteria in the hyper-arid soils of the Antarctic Dry Valleys
    Catarina M. Magalhães, Ana Machado, Béatrice Frank-Fahle, Charles K. Lee, S. Craig Cary
    Frontiers in Microbiology.2014;[Epub]     CrossRef

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