- Differences in the gut microbiota between Cercopithecinae and Colobinae in captivity
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Zongjin Huan , Yongfang Yao , Jianqiu Yu , Hongwei Chen , Meirong Li , Chaojun Yang , Bo Zhao , Qingyong Ni , Mingwang Zhang , Meng Xie , Huailiang Xu
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J. Microbiol. 2020;58(5):367-376. Published online March 28, 2020
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DOI: https://doi.org/10.1007/s12275-020-9493-9
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 Abstract
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The gut microbiome of captive primates can provide a window
into their health and disease status. The diversity and
composition of gut microbiota are influenced by not only
host phylogeny, but also host diet. Old World monkeys (Cercopithecidae)
are divided into two subfamilies: Cercopithecinae
and Colobinae. The diet and physiological digestive features
differ between these two subfamilies. Accordingly, highthroughput
sequencing was used to examine gut microbiota
differences between these two subfamilies, using data from
29 Cercopithecinae individuals and 19 Colobinae individuals
raised in captivity. Through a comparative analysis of operational
taxonomic units (OTUs), significant differences in the
diversity and composition of gut microbiota were observed
between Cercopithecinae and Colobinae. In particular, the gut
microbiota of captive Old World monkeys clustered strongly
by the two subfamilies. The Colobinae microbial diversity was
higher than that of Cercopithecinae. Additionally, Firmicutes,
Lactobacillaceae, Veillonellaceae, and Prevotella abundance
were higher in Cercopithecinae, while Bacteroidetes, Ruminococcaceae,
Christensenellaceae, Bacteroidaceae, and Acidaminococcaceae
abundance were higher in Colobinae. PICRUSt
analysis revealed that the predicted metagenomes of metabolic
pathways associated with proteins, carbohydrates, and
amino acids were significantly higher in Colobinae. In the
context of host phylogeny, these differences between Cercopithecinae
and Colobinae could reflect adaptations associated
with their respective diets. This well-organized dataset is a
valuable resource for future related research on primates and
gut microbiota. Moreover, this study may provide useful insight
into animal management practices and primate conservation.
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Citations
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