- Pedobacter soyangensis sp. nov., Isolated from Lake Soyang in Korea
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Yochan Joung , Heeyoung Kang , Haneul Kim , Beom-Il Lee , O-Seob Kwon , Kiseong Joh
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J. Microbiol. 2014;52(1):83-87. Published online January 4, 2014
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DOI: https://doi.org/10.1007/s12275-014-3284-0
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 Abstract
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Strain HME6451T was isolated from Lake Soyang in Korea.
Phylogenetic tree based on 16S rRNA gene sequence showed
that strain HME6451T formed a lineage within the genus
Pedobacter. The strain HME6451T was closely related to Pedobacter
daechungensis (95.4% sequence similarity), Pedobacter
lentus (94.4%), and Pedobacter glucosidilyticus (93.8%). And
strain HME6451T was a Gram-staining-negative, short rodshaped,
strictly aerobic bacterium. The major fatty acids were
iso-C15:0 (41.2%), summed feature 3 (comprising C16:1 ω7c
and/or C16:1 ω6c; 23.1%), and iso-C17:0-3OH (10.1%). The
polar lipids of HME6451T were consisted of one phosphatidylethanolamine,
one unidentified aminolipid, one unidentified
phospholipid and four unidentified polar lipids. The
DNA G+C content was 36.0 mol%. On the basis of the evidence
presented in this study, strain HME6451T represent a
novel species of the genus Pedobacter, for which the name
Pedobacter soyangensis sp. nov., is proposed the type strain
HME6451T (=KCTC 23467T =CECT 7865T).
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Citations
Citations to this article as recorded by  - Validation List no. 223. Valid publication of new names and new combinations effectively published outside the IJSEM
Aharon Oren, Markus Göker
International Journal of Systematic and Evolutionary Microbiology
.2025;[Epub] CrossRef - Proposal of Pedobacter nototheniae sp. nov., isolated from the spleen of a black rock cod (Notothenia coriiceps, Richardson 1844) from the Chilean Antarctica
Peter Kämpfer, Rute Irgang, Guillermo Fernández-Negrete, Hans-Jürgen Busse, Matías Poblete-Morales, Derie Fuentes-Messina, Stefanie P. Glaeser, Ruben Avendaño-Herrera
Antonie van Leeuwenhoek.2019; 112(10): 1465. CrossRef - Pedobacter vanadiisoli sp. nov., isolated from soil of a vanadium mine
Zhiyong Wang, Yuanqing Tan, Ding Xu, Gejiao Wang, Jihong Yuan, Shixue Zheng
International Journal of Systematic and Evolutionary Microbiology.2016; 66(12): 5112. CrossRef -
Pedobacter rivuli sp. nov., isolated from a freshwater stream
Heeyoung Kang, Haneul Kim, Yochan Joung, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology
.2014; 64(Pt_12): 4073. CrossRef
- Pontibacter jeungdoensis sp. nov., Isolated from a Solar Saltern in Korea
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Yochan Joung , Haneul Kim , Beom-Il Lee , Heeyoung Kang , Tae Yong Jang , O-Seob Kwon , Kiseong Joh
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J. Microbiol. 2013;51(4):531-535. Published online August 30, 2013
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DOI: https://doi.org/10.1007/s12275-013-2324-5
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789
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Abstract
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A Gram-staining-negative, rod-shaped and red-pigmented bacterial strain, HMD3125T, was isolated from a solar saltern in Jeungdo, Republic of Korea. A phylogenetic tree based on 16S rRNA gene sequences showed that strain HMD3125T formed a lineage within the genus Pontibacter and was similar to Pontibacter salisaro (96.1%) and P. korlensis (95.3%). The major fatty acids of strain HMD3125T were summed feature 4 (comprising iso-C17:1 I and/or anteiso-C17:1 B; 30.4%), iso-C15:0 (20.4%) and iso-C17:0 3OH (17.2%). The polar lipid profile of HMD3125T consisted of the phosphatidylethanolamine, four unidentified polar lipids, unidentified phospholipid, unidentified aminolipid and unidentified aminophospholipid. Strain HMD3125T contained MK-7 as the predominant menaquinone and sym-homospermidine as the major polyamine. The DNA G+C content of strain HMD3125T was 45.6 mol%. Strain HMD3125T assigned as a novel species in the genus Pontibacter, for which the name Pontibacter jeungdoensis sp. nov. is proposed. The type strain is HMD3125T (=KCTC 23156T =CECT 7710T).
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Citations
Citations to this article as recorded by - Microbial community and functional prediction during the processing of salt production in a 1000-year-old marine solar saltern of South China
Ya-Li Wei, Zi-Jie Long, Ming-Xun Ren
Science of The Total Environment.2022; 819: 152014. CrossRef -
Pontibacter aquaedesilientis sp. nov., isolated from Jeongbang Waterfall, Jeju Island
Geeta Chhetri, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - High-throughput absolute quantification sequencing reveals the effect of different fertilizer applications on bacterial community in a tomato cultivated coastal saline soil
Si-Qi Jiang, Ya-Nan Yu, Ren-Wei Gao, Huan Wang, Jian Zhang, Rong Li, Xiao-Hua Long, Qi-Rong Shen, Wei Chen, Feng Cai
Science of The Total Environment.2019; 687: 601. CrossRef - Pontibacter chitinilyticus sp. nov., a novel chitin-hydrolysing bacterium isolated from soil
Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Myung Kyum Kim, Taegun Seo
Antonie van Leeuwenhoek.2019; 112(7): 1011. CrossRef - Pontibacter locisalis Sy30T sp. nov. isolated from soil collected from an abandoned saltern
Yan-Xia Zhou, Zhi-Hong Xie, Jin-Xin Zhao, Zong-Jun Du, Guan-Jun Chen
Antonie van Leeuwenhoek.2016; 109(3): 415. CrossRef - Pontibacter amylolyticus sp. nov., isolated from a deep-sea sediment hydrothermal vent field
Yue-Hong Wu, Peng Zhou, Shu-Ling Jian, Zhen-Sheng Liu, Chun-Sheng Wang, Aharon Oren, Xue-Wei Xu
International Journal of Systematic and Evolutionary Microbiology.2016; 66(4): 1760. CrossRef -
Pontibacter aydingkolensis sp. nov., isolated from soil of a salt lake
Ghenijan Osman, Tao Zhang, Kai Lou, Yan Gao, Wei Chang, Qing Lin, Hong-Mei Yang, Xiang-Dong Huo, Ning Wang
International Journal of Systematic and Evolutionary Microbiology
.2016; 66(12): 5523. CrossRef - Pontibacter mucosus sp. nov., isolated from hexachlorocyclohexane-contaminated pond sediment
Namita Nayyar, Puneet Kohli, Nitish Kumar Mahato, Rup Lal
International Journal of Systematic and Evolutionary Microbiology.2016; 66(6): 2234. CrossRef - Pontibacter ummariensis sp. nov., isolated from a hexachlorocyclohexane-contaminated soil
N. K. Mahato, C. Tripathi, N. Nayyar, A. K. Singh, R. Lal
International Journal of Systematic and Evolutionary Microbiology.2016; 66(2): 1080. CrossRef -
Pontibacter chinhatensis sp. nov., isolated from pond sediment containing discarded hexachlorocyclohexane isomer waste
Amit Kumar Singh, Nidhi Garg, Rup Lal
International Journal of Systematic and Evolutionary Microbiology
.2015; 65(Pt_7): 2248. CrossRef - Pontibacter humi sp. nov., Isolated from Mountain Soil
Sathiyaraj Srinivasan, Jae-Jin Lee, Sang-Seob Lee, Myung Kyum Kim
Current Microbiology.2014; 69(3): 263. CrossRef - Pontibacter diazotrophicus sp. nov., a Novel Nitrogen-Fixing Bacterium of the Family Cytophagaceae
Linghua Xu, Xian-Chun Zeng, Yao Nie, Xuesong Luo, Enmin Zhou, Lingli Zhou, Yunfan Pan, Wenjun Li, Paul Jaak Janssen
PLoS ONE.2014; 9(3): e92294. CrossRef
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