Salmonella Typhimurium is a Gram-negative facultative pathogen
that causes a range of diseases, from mild gastroenteritis
to severe systemic infection in a variety of animal
hosts. S. Typhimurium regulates virulence gene expression
by a silencing mechanism using nucleoid-associated proteins
such as Histone-like Nucleoid Structuring protein (H-NS)
silencing. We hypothesize that the posttranslational modification,
specifically protein acetylation, of proteins in gene
silencing systems could affect the pathogenic gene expression
of S. Typhimurium. Therefore, we created acetylation-deficient
mutant by deleting two genes, pat and pta, which are
involved in the protein acetylation pathway. We observed
that the pat and pta deletion attenuates mouse virulence and
also decreases Salmonella’s replication within macrophages.
In addition, the Δpat Δpta strain showed a decreased expression
of the horizontally-acquired virulence genes, mgtC,
pagC, and ugtL, which are highly expressed in low Mg2+. The
decreased virulence gene expression is possibly due to higher
H-NS occupancy to those promoters because the pat and
pta deletion increases H-NS occupancy whereas the same
mutation decreases occupancy of RNA polymerase. Our results
suggest that Pat- and Pta-mediated protein acetylation
system promotes the expression of virulence genes by regulating
the binding affinity of H-NS in S. Typhimurium.
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Molecular analysis based on large-scale sequencing of the
plant microbiota has revealed complex relationships between
plants and microbial communities, and environmental factors
such as soil type can influence these relationships. However,
most studies on root-associated microbial communities
have focused on model plants such as Arabidopsis, rice or
crops. Herein, we examined the microbiota of rhizocompartments
of two native plants, Sedum takesimense Nakai and
Campanula takesimana Nakai, using archaeal and bacterial
16S rRNA gene amplicon profiling, and assessed relationships
between environmental factors and microbial community
composition. We identified 390 bacterial genera, including
known plant-associated genera such as Pseudomonas,
Flavobacterium, Bradyrhizobium and Rhizobium, and uncharacterized
clades such as DA101 that might be important
in root-associated microbial communities in bulk soil. Unexpectedly,
Nitrososphaera clade members were abundant,
indicating functional association with roots. Soil texture/type
has a greater impact on microbial community composition
in rhizocompartments than chemical factors. Our results provide
fundamental knowledge on microbial diversity, community
and correlations with environmental factors, and expand
our understanding of the microbiota in rhizocompartments
of native plants.
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