MSK
Search
- Page Path
- HOME > Search
Journal Article
- Aeromicrobium endophyticum sp. nov., an endophytic actinobacterium isolated from reed (Phragmites australis)
- Fei-Na Li , Shui-Lin Liao , Shao-Wei Liu , Tao Jin , Cheng-Hang Sun
- J. Microbiol. 2019;57(9):725-731. Published online May 23, 2019
- DOI: https://doi.org/10.1007/s12275-019-8705-7
- 55 View
- 0 Download
- 21 Web of Science
- 16 Crossref
-
Abstract
- A Gram-staining-positive, motile and short-rod-shaped actinobacterium designated 9W16Y-2T was isolated from surface- sterilized leaves of reed (Phragmites australis) collected from Taklamakan Desert in Xinjiang Uygur Autonomous Region, China. Colonies were pale greenish yellow, circular, smooth, and convex. The 16S rRNA gene sequence of strain 9W16Y-2T exhibited highest sequence similarities with Aeromicrobium camelliae CGMCC 1.12942T (99.0%) and Aeromicrobium erythreum NRRL B-3381T (97.2%). Phylogenetic analyses based on 16S rRNA gene sequences and single-copy phylogenetic marker genes (pMGs) showed that strain 9W16Y- 2T belonged to the genus Aeromicrobium and formed a monophyletic clade with Aeromicrobium camelliae CGMCC 1.12942T. Furthermore, average nucleotide identity (ANI) and DNA-DNA hybridization (DDH) clearly separated strain 9W16Y-2T from the other species of the genus Aeromicrobium with values below the thresholds for species delineation. The G+C content of the genomic DNA is 68.9 mol%. The diagnostic diamino acid of the cell-wall peptidoglycan was LLdiaminopimelic acid. The predominant menaquinone was MK-9(H4). The major fatty acids (> 10% of the total fatty acids) were C18:0 10-methyl (TBSA) (28.2%), C16:0 (21.0%), C16:0 2-OH (20.8%) and C18:1 ω9c (12.8%). The polar lipid profile comprised diphosphatidylglycerol, phosphatidylglycerol, phosphatidylcholine, phosphatidylinositol, an unidentified aminophospholipid and an unidentified lipid. Based on the phylogenic, phenotypic and chemotaxonomic features, strain 9W16Y-2T represents a novel species of the genus Aeromicrobium, for which the name Aeromicrobium endophyticum sp. nov. is proposed. The type strain is 9W16Y-2T (= CGMCC 1.13876T = JCM 33141T).
-
Citations
Citations to this article as recorded by
-
Solibacillus palustris sp. nov., isolated from wetland soil of ecology park
Jung-Hun Jo, Soon-Youl Lee, Moon-Soo Rhee, Kang-Hyun Lee, Se-Yoon Chun, Wan-Taek Im
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef -
Ruegeria spongiae sp. nov., isolated from Callyspongia elongata
Seung-Min Han, Jin-Sook Park
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef -
Ramlibacter paludis sp. nov., isolated from wetland
Ji-Eun Lim, Jung-Hun Jo, Wan-Taek Im
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef - Paludibacterium denitrificans sp. nov., a Novel Denitrifying Bacterium Isolated from Activated Sludge
Ji Eun Lee, Gyu-Min Choi, Yong-Jae Lee, Sang-Mi Lee, Soon Youl Lee, Wan-Taek Im
Current Microbiology.2022;[Epub] CrossRef - Histidinibacterium aquaticum sp. nov., Isolated from Salt-Field Sea Water
Kyu-Hang Lee, Jin-Sook Park
Current Microbiology.2022;[Epub] CrossRef -
Parashewanella hymeniacidonis sp. nov., isolated from marine sponge (Hymeniacidon sinapium)
Soo-Bin Kim, Jin-Sook Park
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef - Renewed interests in the discovery of bioactive actinomycete metabolites driven by emerging technologies
Jenifer Ossai, Behnam Khatabi, S. Eric Nybo, Madan K. Kharel
Journal of Applied Microbiology.2022; 132(1): 59. CrossRef - Bioprospecting of Soil-Derived Actinobacteria Along the Alar-Hotan Desert Highway in the Taklamakan Desert
Shaowei Liu, Ting Wang, Qinpei Lu, Feina Li, Gang Wu, Zhongke Jiang, Xugela Habden, Lin Liu, Xiaolin Zhang, Dmitry A. Lukianov, Ilya A. Osterman, Petr V. Sergiev, Olga A. Dontsova, Chenghang Sun
Frontiers in Microbiology.2021;[Epub] CrossRef -
Chryseobacterium panacisoli sp. nov., isolated from ginseng-cultivation soil with ginsenoside-converting activity
Dong Ho Keum, Jun Mo Yeon, Chan-Seok Yun, Soon Youl Lee, Wan-Taek Im
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef - Flagellimonas hymeniacidonis sp. nov., Isolated from the Sponge Hymeniacidon sinapium
Tae-Gi Shin, Jin-Sook Park
Current Microbiology.2021; 78(3): 1061. CrossRef -
Vibrio ulleungensis sp. nov., isolated from Mytilus coruscus
Yea-Lin Moon, Jin-Sook Park
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef - Actinobacteria From Desert: Diversity and Biotechnological Applications
Feiyang Xie, Wasu Pathom-aree
Frontiers in Microbiology.2021;[Epub] CrossRef -
Aeromicrobium chenweiae sp. nov. and Aeromicrobium yanjiei sp. nov., isolated from Tibetan antelope (Pantholops hodgsonii) and plateau pika (Ochotona curzoniae), respectively
Junqin Li, Wenjing Lei, Jing Yang, Shan Lu, Dong Jin, Xin-He Lai, Sihui Zhang, Yanpeng Cheng, Fei Mi, Yuyuan Huang, Ji Pu, Kui Dong, Zhi Tian, Xiaomin Wu, Ying Huang, Suping Wang, Jianguo Xu
International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4683. CrossRef -
Hydrogenophaga borbori sp. nov., isolated from activated sludge
Gyu-min Choi, Soon Youl Lee, Sang Yong Kim, Ji-Hyang Wee, Wan-Taek Im
International Journal of Systematic and Evolutionary Microbiology .2020; 70(1): 555. CrossRef - Ochrobactrum soli sp. nov., Isolated from a Korean Cattle Farm
Gyu-Min Choi, Kyung Min Kim, Chan-Seok Yun, Soon Youl Lee, Sang Yong Kim, Ji-Hyang Wee, Wan-Taek Im
Current Microbiology.2020; 77(6): 1104. CrossRef - Comparative Lipidomic Analysis of Extracellular Vesicles Derived from Lactobacillus plantarum APsulloc 331261 Living in Green Tea Leaves Using Liquid Chromatography-Mass Spectrometry
Hyoseon Kim, Minjung Kim, Kilsun Myoung, Wanil Kim, Jaeyoung Ko, Kwang Pyo Kim, Eun-Gyung Cho
International Journal of Molecular Sciences.2020; 21(21): 8076. CrossRef
-
Solibacillus palustris sp. nov., isolated from wetland soil of ecology park
First
Prev
TOP
