- Whole genome analysis of Aspergillus sojae SMF 134 supports its merits as a starter for soybean fermentation
-
Kang Uk Kim , Kyung Min Kim , Yong-Ho Choi , Byung-Serk Hurh , Inhyung Lee
-
J. Microbiol. 2019;57(10):874-883. Published online June 27, 2019
-
DOI: https://doi.org/10.1007/s12275-019-9152-1
-
-
953
View
-
1
Download
-
15
Web of Science
-
15
Crossref
-
Abstract
PDF
-
Aspergillus sojae is a koji (starter) mold that has been applied
for food fermentation in Asia. The whole genome of A. sojae
SMF 134, which was isolated from meju (Korean soybean
fermented brick), was analyzed at the genomic level to evaluate
its potential as a starter for soybean fermentation. The
genome size was 40.1 Mbp, which was expected to be composed
of eight chromosomes with 13,748 ORFs. Strain SMF
134 had a total of 151 protease genes, among which two more
leucine aminopeptidase (lap) genes were found in addition to
the previously known lap1, and three γ-glutamyltranspeptidase
(ggt) genes were newly identified. Such genomic characteristics
of SMF 134 with many protease and flavor-related
(lap and ggt) genes support its merits as a starter for soybean
fermentation. In addition, this first complete genome of
A. sojae will allow for further genetic studies to better understand
the production of various enzymes, including proteases,
LAPs, and GGTs, as well as other characteristics as a starter
mold for soybean fermentation.
-
Citations
Citations to this article as recorded by 
- Population Genomics of Aspergillus sojae is Shaped by the Food Environment
Kimberly L Acevedo, Elizabeth Eaton, Julia Leite, Shu Zhao, Katherine Chacon-Vargas, Colin M McCarthy, Dasol Choi, Samuel O’Donnell, Emile Gluck-Thaler, Jae-Hyuk Yu, John G Gibbons, Rebecca Zufall Genome Biology and Evolution.2025;[Epub] CrossRef - Starter molds and multi-enzyme catalysis in koji fermentation of soy sauce brewing: A review
Yihao Liu, Guangru Sun, Jingyao Li, Peng Cheng, Qian Song, Wen Lv, Chunling Wang Food Research International.2024; 184: 114273. CrossRef - Phenotypic, Genomic, and Transcriptomic Comparison of Industrial Aspergillus oryzae Used in Chinese and Japanese Soy Sauce: Analysis of Key Proteolytic Enzymes Produced by Koji Molds
Lijie Zhang, Le Kang, Yan Xu, Yanbin Yin Microbiology Spectrum.2023;[Epub] CrossRef - Characteristics of the soy sauce taste and koji enzyme profiles as affected by soybean traits
Yimin Chen, Mouming Zhao, Yunzi Feng Food Bioscience.2023; 53: 102776. CrossRef - Comparative proteome and volatile metabolome analysis of Aspergillus oryzae 3.042 and Aspergillus sojae 3.495 during koji fermentation
Jingyao Li, Bin Liu, Xiaojuan Feng, Mengli Zhang, Tingting Ding, Yue Zhao, Chunling Wang Food Research International.2023; 165: 112527. CrossRef - CRISPR/Cas9 genome editing for comparative genetic analysis related to soy sauce brewing in Aspergillus sojae industrial strains
Takayuki Igarashi, Takuya Katayama, Jun-ichi Maruyama Bioscience, Biotechnology, and Biochemistry.2023; 87(10): 1236. CrossRef - Untargeted metabolomic profiling of Aspergillus sojae 3.495 and Aspergillus oryzae 3.042 fermented soy sauce koji and effect on moromi fermentation flavor
Jingyao Li, Chengguo Sun, Zhanyu Shen, Yutong Tian, Fanghua Mo, Binghui Wang, Bin Liu, Chunling Wang LWT.2023; 184: 115027. CrossRef - Identification of Virulence Factors in Entomopathogenic Aspergillus flavus Isolated from Naturally Infected Rhipicephalus microplus
Cesar A. Arreguin-Perez, Estefan Miranda-Miranda, Jorge Luis Folch-Mallol, Raquel Cossío-Bayúgar Microorganisms.2023; 11(8): 2107. CrossRef - Are Current Aspergillus sojae Strains Originated from a Native Aflatoxigenic Aspergillus Species Population Also Present in California?
Perng-Kuang Chang, Sui Sheng T. Hua Mycobiology.2023; 51(3): 139. CrossRef - Investigating the origin of subtelomeric and centromeric AT-rich elements in Aspergillus flavus
Arthur J. Lustig, Cecile Fairhead PLOS ONE.2023; 18(2): e0279148. CrossRef -
Whole-genome sequence of an
Aspergillus parasiticus
strain isolated from Kenyan soil
Alexandra Schamann, Rolf Geisen, Markus Schmidt-Heydt, Antonis Rokas Microbiology Resource Announcements.2023;[Epub] CrossRef - Ethno-microbiology of Tempe, an Indonesian fungal-fermented soybean food and Koji, a Japanese fungal starter culture
Jyoti P Tamang, Anu Anupma, Headstar Nakibapher Jones Shangpliang Current Opinion in Food Science.2022; 48: 100912. CrossRef - Regulation of Conidiogenesis in Aspergillus flavus
He-Jin Cho, Sung-Hun Son, Wanping Chen, Ye-Eun Son, Inhyung Lee, Jae-Hyuk Yu, Hee-Soo Park Cells.2022; 11(18): 2796. CrossRef - High molecular weight DNA extraction methods lead to high quality filamentous ascomycete fungal genome assemblies using Oxford Nanopore sequencing
Celine Petersen, Trine Sørensen, Klaus R. Westphal, Lavinia I. Fechete, Teis E. Sondergaard, Jens L. Sørensen, Kåre L. Nielsen
Microbial Genomics
.2022;[Epub] CrossRef - Koji Molds for Japanese Soy Sauce Brewing: Characteristics and Key Enzymes
Kotaro Ito, Asahi Matsuyama Journal of Fungi.2021; 7(8): 658. CrossRef
- Heterologous expression and enzymatic characterization of γ-glutamyltranspeptidase from Bacillus amyloliquefaciens
-
Jung-Min Lee , Jaejung Lee , Gyeong-Hwa Nam , Byung-Sam Son , Myoung-Uoon Jang , So-Won Lee , Byung-Serk Hurh , Tae-Jip Kim
-
J. Microbiol. 2017;55(2):147-152. Published online January 26, 2017
-
DOI: https://doi.org/10.1007/s12275-017-6638-6
-
-
1,071
View
-
2
Download
-
16
Crossref
-
Abstract
PDF
-
γ-Glutamyltranspeptidase (GGT) catalyzes the cleavage of γ-
glutamyl compounds and the transfer of γ-glutamyl moiety
to water or to amino acid/peptide acceptors. GGT can be utilized
for the generation of γ-glutamyl peptides or glutamic
acid, which are used as food taste enhancers. In the present
study, Bacillus amyloliquefaciens SMB469 with high GGT activity
was isolated from Doenjang, a traditional fermented soy
food of Korea. The gene encoding GGT from B. amyloliquefaciens
SMB469 (BaGGT469) was cloned from the isolate, and
heterologously expressed in E. coli and B. subtilis. For comparison,
three additional GGT genes were cloned from B.
subtilis 168, B. licheniformis DSM 13, and B. amyloliquefaciens
FZB42. The BaGGT469 protein was composed of 591
amino acids. The final protein comprises two separate polypeptide
chains of 45.7 and 19.7 kDa, generated via autocatalytic
cleavage. The specific activity of BaGGT469 was determined
to be 17.8 U/mg with γ-L-glutamyl-p-nitroanilide
as the substrate and diglycine as the acceptor. GGTs from B.
amyloliquefaciens showed 1.4- and 1.7-fold higher transpeptidase
activities than those from B. subtilis and B. licheniformis,
respectively. Especially, recombinant B. subtilis expressing
BaGGT469 demonstrated 11- and 23-fold higher GGT
activity than recombinant E. coli and the native B. amyloliquefaciens,
respectively, did. These results suggest that BaGGT469
can be utilized for the enzymatic production of various γ-
glutamyl compounds.
-
Citations
Citations to this article as recorded by 
- Molecular mechanism of γ-glutamyl transferase derived from Rhodotorula mucilaginosa on γ-glutamyl peptide biosynthesis: γ-glutamyl transferase–substrate recognition, substrate affinity and γ-glutamyl peptide profiling
Tianmeng Zhang, Qiang Xia, Ying Wang, Yangying Sun, Daodong Pan, Jinxuan Cao, Ren-You Gan, Changyu Zhou International Journal of Biological Macromolecules.2026; 359: 151848. CrossRef - Exploring the capacity of Bacillus species for production of kokumi γ-glutamyl peptides: A comparative study
Qian Li, Longteng Zhang, Dennis Sandris Nielsen, Lene Jespersen, René Lametsch LWT.2024; 206: 116542. CrossRef - Functional connexion of bacterioferritin in antibiotic production and morphological differentiation in Streptomyces coelicolor
Javier García-Martín, Laura García-Abad, Ramón I. Santamaría, Margarita Díaz Microbial Cell Factories.2024;[Epub] CrossRef - Efficient expression of γ-glutamyl transpeptidase in Bacillus subtilis via CRISPR/Cas9n and its immobilization
Qianlin Chen, Bin Wang, Li Pan Applied Microbiology and Biotechnology.2024;[Epub] CrossRef - Biochemical Characterization of γ-Glutamyl Transpeptidase from Bacillus altitudinis IHB B1644 and Its Application in the Synthesis of l-Theanine
Eshita Sharma, Milan Kumar Lal, Arvind Gulati, Ashu Gulati Journal of Agricultural and Food Chemistry.2023; 71(14): 5592. CrossRef - Characterization of alkaline Bacillus amyloliquefaciens γ-glutamyltranspeptidase expressed in Bacillus subtilis and its application in enzymatic synthesis of L‑Theanine
Ran Zhang, Luhua Zheng, Licheng Zhou, Longbei Xiang, Bo Jiang, Tao Zhang, Jingjing Chen Process Biochemistry.2023; 131: 125. CrossRef - Heterologous expression, on-column refolding and characterization of gamma-glutamyl transpeptidase gene from Bacillus altitudinis IHB B1644: A microbial bioresource from Western Himalayas
Eshita Sharma, Milan Kumar Lal, Arvind Gulati, Ashu Gulati Process Biochemistry.2022; 116: 126. CrossRef - Expression of Bacillus amyloliquefaciens γ-Glutamyltransferase in Lactococcus lactis and Immobilization on Magnetic Nanoparticles
Tiange Ma, Xingjiang Li, Xuefeng Wu, Suwei Jiang, Zhi Zheng, Dongdong Mu ACS Food Science & Technology.2021; 1(5): 778. CrossRef - Bacterial Gamma-Glutamyl Transpeptidase, an Emerging Biocatalyst: Insights Into Structure–Function Relationship and Its Biotechnological Applications
Meenu Saini, Amuliya Kashyap, Shruti Bindal, Kuldeep Saini, Rani Gupta Frontiers in Microbiology.2021;[Epub] CrossRef - A chemical screening method for menaquinone-producing strains based on HPLC-UV technology
Sheng Cao, Xia Du, Pingyi Li, Ganjun Yuan, Shanjun Chen, Weiping Chen, Xiaoyuan Song, Bingdi Kuang Journal of Microbiological Methods.2020; 172: 105907. CrossRef - γ-Glutamyltranspeptidase from Bacillus amyloliquefaciens: transpeptidation activity enhancement and L-theanine production
Zelong Li, Runtao Zhu, Yongqi Liu, Jiaqi Li, Haofeng Gao, Nan Hu Enzyme and Microbial Technology.2020; 140: 109644. CrossRef - Secretion of Bacillus amyloliquefaciens γ-Glutamyltranspeptidase from Bacillus subtilis and Its Application in Enzymatic Synthesis of l-Theanine
Dongdong Mu, Haowen Li, Qi Chen, Jing Zhu, Xuefeng Wu, Shuizhong Luo, Yanyan Zhao, Lei Wang, Shaotong Jiang, Xingjiang Li, Zhi Zheng Journal of Agricultural and Food Chemistry.2019; 67(51): 14129. CrossRef - High level extracellular production of recombinant γ-glutamyl transpeptidase from Bacillus licheniformis in Escherichia coli fed-batch culture
Shruti Bindal, Vikas Kumar Dagar, Meenu Saini, Yogender Pal Khasa, Rani Gupta Enzyme and Microbial Technology.2018; 116: 23. CrossRef - γ-Glutamyl Cysteine Ligase of Lactobacillus reuteri Synthesizes γ-Glutamyl Dipeptides in Sourdough
Bowen Yan, Yuan Yao Chen, Weilan Wang, Jianxin Zhao, Wei Chen, Michael Gänzle Journal of Agricultural and Food Chemistry.2018; 66(46): 12368. CrossRef - Inference of sigma factor controlled networks by using numerical modeling applied to microarray time series data of the germinating prokaryote
E. Strakova, A. Zikova, J. Vohradsky Nucleic Acids Research.2014; 42(2): 748. CrossRef - The effectiveness of novel bacteriocin derived from Escherichia coli colonized in the fermented pineapple Ananas comosus (L.) Merr. against pathogenic bacteria isolated from aquaculture sites
S. W. Lee, W. Wendy, L. Montira, A. U. Siti Hazirah Veterinary World.2014; 7(11): 1014. CrossRef
|